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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:2338415..2339531- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000786-T1 ID=CBS51388_000786-T1|Name=CBS51388_000786-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1117bp|location=Sequence derived from alignment at An01:2338415..2339531- (Aspergillus niger CBS 513.88)
ATGCCACCATTCATTCCCCCCTCGGAGGACTTCCCCAGCATCCTTAAAGG
CAAACGAATTCTCCTCACCACTGAATCCCTTGGTCCAGTCAACGGCGTCA
GTCGCACAACCGGCAAACTAATCGAGTATTTGCGTCGCAATGGCGTCGAA
TTGGCCGTCGTGGCACCACAATTCACCTCCTCACCATCACAACAACAAGA
CACAATAGACACCACAATCCGCCTCCCCGGCTACCCCCTCCCCTACAATC
CGGATCTAACCCTCGTCTAACCCTACAACCTCACCACCACAATCTACCCC
CAAACCTTCTCCCCCGACCTAATCTACATCGCCAGCCCAGCCAGTCTGGG
CTTCCAACTCCTCCTACAACTCCGCCAACTACACTCTCCTCCACCAACGC
TTCTAAACTACCAGACCGACCTGTCCTCCTACAGCTCAATCATCTTCCCC
AAGCCCCTCTCCACCTTCGCCGTCTGGCTCCTCTCCCTTGTGGAAGGCTA
TCTCTTCCGCACTCCTTGCATCCACACAATCTTCTACCCGTGCAGTGATG
TCCTAACCTACTTGAAATCCACCAATACTCCTATACGCAAAACCCATCGA
TTAGGGAGAGGAGTCGATACGTCTCTCTTTAATCCATCCCGCCGGTCTCA
GTCCTTACGGGATACGTTAGCTCCAAACGGCGAAGCTATCCTGCTAACAG
TTTGTCGGATCGCGCCTGAGAAGGGGTTTGAGTTCCTCGCTGAGGCTGTC
ACACACCTTCTCTCTAGTACTAAAATCCCCTTCAAGCTGGTAATAGTCGG
CGGGAACGCCAACCCCGCCGTGACATCACGCATTCAGTCCCTCTTCCACC
ACATCTCCTCACACGTCATCTTCCTTGGCTTCAGAACCGGCGAAGAGTTA
GCGAGCATCTACGCCTCAGCGGACATATTCCTGCACTGCTCTATCACAGA
GACGTTCGGGCTGGTCGTGCTGGAGGCTATGGCGAGCGGGTTGCCAGTCA
TCGCAAGGGATCAAGGTGGTCCGTCGGATATTGTGAGGAATCAGGAGACG
GGGTACTTGGTTTCGGTGGCGGAGGGGGAAGTGGGCGTGTTTAGTGGGCT
TGTGGGGGAGATGTTGA back to topCoding sequence (CDS) from alignment at An01:2338415..2339531- >CBS51388_000786-T1 ID=CBS51388_000786-T1|Name=CBS51388_000786-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2727bp|location=Sequence derived from alignment at An01:2338415..2339531- (Aspergillus niger CBS 513.88)
ATGTTGAACCGACCTGTCCTCCTACAGCTCAATCATCTTCCCCAAGCCCC
TCTCCACCTTCGCCGTCTGGCTCCTCTCCCTTGTGGAAGGCTATCTCTTC
CGCACTCCTTGCATCCACACAATCTTCTACCCGTGCAGTGATGTCCTAAC
CTACTTGAAATCCACCAATACTCCTATACGCAAAACCCATCGATTAGGGA
GAGGAGTCGATACGTCTCTCTTTAATCCATCCCGCCGGTCTCAGTCCTTA
CGGGATACGTTAGCTCCAAACGGCGAAGCTATCCTGCTAACAGTTTGTCG
GATCGCGCCTGAGAAGGGGTTTGAGTTCCTCGCTGAGGCTGTCACACACC
TTCTCTCTAGTACTAAAATCCCCTTCAAGCTGGTAATAGTCGGCGGGAAC
GCCAACCCCGCCGTGACATCACGCATTCAGTCCCTCTTCCACCACATCTC
CTCACACGTCATCTTCCTTGGCTTCAGAACCGGCGAAGAGTTAGCGAGCA
TCTACGCCTCAGCGGACATATTCCTGCACTGCTCTATCACAGAGACGTTC
GGGCTGGTCGTGCTGGAGGCTATGGCGAGCGGGTTGCCAGTCATCGCAAG
GGATCAAGGTGGTCCGTCGGATATTGTGAGGAATCAGGAGACGGGATGCC
ACCATTCATTCCCCCCTCGGAGGACTTCCCCAGCATCCTTAAAGGCAAAC
GAATTCTCCTCACCACTGAATCCCTTGGTCCAGTCAACGGCGTCAGTCGC
ACAACCGGCAAACTAATCGAGTATTTGCGTCGCAATGGCGTCGAATTGGC
CGTCGTGGCACCACAATTCACCTCCTCACCATCACAACAACAAGACACAA
TAGACACCACAATCCGCCTCCCCGGCTACCCCCTCCCCTACAATCCGGAT
CTAACCCTCATGTTGAACCGACCTGTCCTCCTACAGCTCAATCATCTTCC
CCAAGCCCCTCTCCACCTTCGCCGTCTGGCTCCTCTCCCTTGTGGAAGGC
TATCTCTTCCGCACTCCTTGCATCCACACAATCTTCTACCCGTGCAGTGA
TGTCCTAACCTACTTGAAATCCACCAATACTCCTATACGCAAAACCCATC
GATTAGGGAGAGGAGTCGATACGTCTCTCTTTAATCCATCCCGCCGGTCT
CAGTCCTTACGGGATACGTTAGCTCCAAACGGCGAAGCTATCCTGCTAAC
AGTTTGTCGGATCGCGCCTGAGAAGGGGTTTGAGTTCCTCGCTGAGGCTG
TCACACACCTTCTCTCTAGTACTAAAATCCCCTTCAAGCTGGTAATAGTC
GGCGGGAACGCCAACCCCGCCGTGACATCACGCATTCAGTCCCTCTTCCA
CCACATCTCCTCACACGTCATCTTCCTTGGCTTCAGAACCGGCGAAGAGT
TAGCGAGCATCTACGCCTCAGCGGACATATTCCTGCACTGCTCTATCACA
GAGACGTTCGGGCTGGTCGTGCTGGAGGCTATGGCGAGCGGGTTGCCAGT
CATCGCAAGGGATCAAGGTGGTCCGTCGGATATTGTGAGGAATCAGGAGA
CGGGATGCCACCATTCATTCCCCCCTCGGAGGACTTCCCCAGCATCCTTA
AAGGCAAACGAATTCTCCTCACCACTGAATCCCTTGGTCCAGTCAACGGC
GTCAGTCGCACAACCGGCAAACTAATCGAGTATTTGCGTCGCAATGGCGT
CGAATTGGCCGTCGTGGCACCACAATTCACCTCCTCACCATCACAACAAC
AAGACACAATAGACACCACAATCCGCCTCCCCGGCTACCCCCTCCCCTAC
AATCCGGATCTAACCCTCATGTTGAACCGACCTGTCCTCCTACAGCTCAA
TCATCTTCCCCAAGCCCCTCTCCACCTTCGCCGTCTGGCTCCTCTCCCTT
GTGGAAGGCTATCTCTTCCGCACTCCTTGCATCCACACAATCTTCTACCC
GTGCAGTGATGTCCTAACCTACTTGAAATCCACCAATACTCCTATACGCA
AAACCCATCGATTAGGGAGAGGAGTCGATACGTCTCTCTTTAATCCATCC
CGCCGGTCTCAGTCCTTACGGGATACGTTAGCTCCAAACGGCGAAGCTAT
CCTGCTAACAGTTTGTCGGATCGCGCCTGAGAAGGGGTTTGAGTTCCTCG
CTGAGGCTGTCACACACCTTCTCTCTAGTACTAAAATCCCCTTCAAGCTG
GTAATAGTCGGCGGGAACGCCAACCCCGCCGTGACATCACGCATTCAGTC
CCTCTTCCACCACATCTCCTCACACGTCATCTTCCTTGGCTTCAGAACCG
GCGAAGAGTTAGCGAGCATCTACGCCTCAGCGGACATATTCCTGCACTGC
TCTATCACAGAGACGTTCGGGCTGGTCGTGCTGGAGGCTATGGCGAGCGG
GTTGCCAGTCATCGCAAGGGATCAAGGTGGTCCGTCGGATATTGTGAGGA
ATCAGGAGACGGGATGCCACCATTCATTCCCCCCTCGGAGGACTTCCCCA
GCATCCTTAAAGGCAAACGAATTCTCCTCACCACTGAATCCCTTGGTCCA
GTCAACGGCGTCAGTCGCACAACCGGCAAACTAATCGAGTATTTGCGTCG
CAATGGCGTCGAATTGGCCGTCGTGGCACCACAATTCACCTCCTCACCAT
CACAACAACAAGACACAATAGACACCACAATCCGCCTCCCCGGCTACCCC
CTCCCCTACAATCCGGATCTAACCCTC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT4 |
| DBxref | InterPro:IPR001296 |
| DBxref | PFAM:PF13692 |
| DBxref | PFAM:PF00534 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:2338415..2339531 - |
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