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CBS51388_000798-T1, CBS51388_000798-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000798-T1
Unique NameCBS51388_000798-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2361415..2362913-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000798-T1 ID=CBS51388_000798-T1|Name=CBS51388_000798-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1499bp|location=Sequence derived from alignment at An01:2361415..2362913- (Aspergillus niger CBS 513.88)
ATGTCTTCCACTTCCGATCGACAGTATGACGAAACGATAACTCGCCTAGT
TGAGTATGTTTATCACTACGAAGTGACCAGCGACCTCGCTATCCTACGGG
CCCGCTATGCCCTCATGGATGCTCTTGGTTGCGCGCTGGAGACTCTTCAG
CAAAGCCCCGAGTGTCGCGCTCTGATCGGCCCATACACACCAGGTCTGGT
CGCCCCTTATGGGTTCAAGCTGCCGGGCACCTGCCACCAACTTGATCCAG
TCAAGGGTGCCTTTGATATGGCAACCTTGATTCGCTTCCTGGACCACAAC
GATGCATACCCTGGTGCTGAATGGGGCCACCCGTCTGGTATGCCCGTCTG
CGGGATCTACGCTCCCAGAAGCTTGGTTGAATATAGGGCTAACCGATCGA
CAAAACAGATAACCTGGGCGCCATCTTGGCGGTCACAGATTGGCTCAGCC
GTACAGGCGCCACCAGCCAGCCACTGACCGTCCGGACGGTCCTGATCGCG
ATGATCAAAGCCTACGAGATTCAAGGCTGCTACCAGATCCGCAATGCCTT
CAACAAGGTGGGCCTAGATCATACGCTACTCGTGAAGATCGCCTCCACAG
CTGTTGTAGCTTGGTTGATGGGTCTGACGGAGAAACAAGCCGCCGTCGCG
CTCTCCCATGCGTGGGCTGATGGCCACCCTCTGCGCATTTTCCGTCAAAG
TCCTAATGCGGGGCCACGCAAGGGCTGGGCCGCTGGAGATGCCGCCATGC
GTGCTGTACACTTGTGCTTACTAGCTCGCGCCGGCCAGCCAGGCATTCCC
AGCGCGCTAACTGAGCCGGAATGGGGGTTTCTCGCTGTCAGCTTTGGGGG
CAAAGAGCTGCAGCTGCCACGTCCTTTCAAGACCCGGGTGATGGAGGAAG
TTTTCTTCAAACTCATCACTGCAGAGGGCCACGGCATCTCCGCAGTTCAG
GCGGCCATGGCGCTGGCTGAGACCATGGCCAGCAGGGGGATCGATCCTGC
TACTGAAATCAGTCGCATCGATATCCGCACGCATGAAGCGGCTGTACGCA
TCATCGACAAGCAAGGCCCGCTCACCAATGCGGCCGACCGCGATCACTGC
ATGCGGTACATGGTCTCGGTGGTGTTGTTGAAGAACGCGATCATCGAAGC
AGAGGACTACCACGATTCGAGCGTGTGGGCCCATGATCCGCGTGTTGAGG
CCCTACGCCAGCGGATCCATATGGCCGAAGACCCGCAGTTCACCTACGGC
TACCACCACAAAAAGGCGGCCGCCAGCGGACTCACCGTCTTTCTGACCAA
CGGGGAGCAGTTAGACGAAGTAGTCGTCGAATACCCAATCGGGCATCCGA
TGCACGAAGATACTTTGCCTAAGGTGCGCGCCAAGTTTGAGCGAAACATG
CAGGGCCTGTTCACGGCCGAGGAGACAAGCCGGGTGATCGACGCGATCCA
TCAGGACAAACTTCCGGTGCATCGATTGGTCGACCTGCTGGGCCGATGA
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Coding sequence (CDS) from alignment at An01:2361415..2362913-

>CBS51388_000798-T1 ID=CBS51388_000798-T1|Name=CBS51388_000798-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2856bp|location=Sequence derived from alignment at An01:2361415..2362913- (Aspergillus niger CBS 513.88)
ATAACCTGGGCGCCATCTTGGCGGTCACAGATTGGCTCAGCCGTACAGGC
GCCACCAGCCAGCCACTGACCGTCCGGACGGTCCTGATCGCGATGATCAA
AGCCTACGAGATTCAAGGCTGCTACCAGATCCGCAATGCCTTCAACAAGG
TGGGCCTAGATCATACGCTACTCGTGAAGATCGCCTCCACAGCTGTTGTA
GCTTGGTTGATGGGTCTGACGGAGAAACAAGCCGCCGTCGCGCTCTCCCA
TGCGTGGGCTGATGGCCACCCTCTGCGCATTTTCCGTCAAAGTCCTAATG
CGGGGCCACGCAAGGGCTGGGCCGCTGGAGATGCCGCCATGCGTGCTGTA
CACTTGTGCTTACTAGCTCGCGCCGGCCAGCCAGGCATTCCCAGCGCGCT
AACTGAGCCGGAATGGGGGTTTCTCGCTGTCAGCTTTGGGGGCAAAGAGC
TGCAGCTGCCACGTCCTTTCAAGACCCGGGTGATGGAGGAAGTTTTCTTC
AAACTCATCACTGCAGAGGGCCACGGCATCTCCGCAGTTCAGGCGGCCAT
GGCGCTGGCTGAGACCATGGCCAGCAGGGGGATCGATCCTGCTACTGAAA
TCAGTCGCATCGATATCCGCACGCATGAAGCGGCTGTACGCATCATCGAC
AAGCAAGGCCCGCTCACCAATGCGGCCGACCGCGATCACTGCATGCGGTA
CATGGTCTCGGTGGTGTTGTTGAAGAACGCGATCATCGAAGCAGAGGACT
ACCACGATTCGAGCGTGTGGGCCCATGATCCGCGTGTTGAGGCCCTACGC
CAGCGGATCCATATGGCCGAAGACCCGCAGTTCACCTACGGCTACCACCA
CAAAAAGGCGGCCGCCAGCGGACTCACCGTCTTTCTGACCAACGGGGAGC
AGTTAGACGAAGTAGTCGTCGAATACCCAATCGGGCATCCGATGCACGAA
GATACTTTGCCTAAGGTGCGCGCCAAGTTTGAGCGAAACATGCAGGGCCT
GTTCACGGCCGAGGAGACAAGCCGGGTGATCGACGCGATCCATCAGGACA
AACTTCCGGTGCATCGATTGGTCGACCTGCTGGGCCGATGAATGTCTTCC
ACTTCCGATCGACAGTATGACGAAACGATAACTCGCCTAGTTGAGTATGT
TTATCACTACGAAGTGACCAGCGACCTCGCTATCCTACGGGCCCGCTATG
CCCTCATGGATGCTCTTGGTTGCGCGCTGGAGACTCTTCAGCAAAGCCCC
GAGTGTCGCGCTCTGATCGGCCCATACACACCAGGTCTGGTCGCCCCTTA
TGGGTTCAAGCTGCCGGGCACCTGCCACCAACTTGATCCAGTCAAGGGTG
CCTTTGATATGGCAACCTTGATTCGCTTCCTGGACCACAACGATGCATAC
CCTGGTGCTGAATGGGGCCACCCGTCTGATAACCTGGGCGCCATCTTGGC
GGTCACAGATTGGCTCAGCCGTACAGGCGCCACCAGCCAGCCACTGACCG
TCCGGACGGTCCTGATCGCGATGATCAAAGCCTACGAGATTCAAGGCTGC
TACCAGATCCGCAATGCCTTCAACAAGGTGGGCCTAGATCATACGCTACT
CGTGAAGATCGCCTCCACAGCTGTTGTAGCTTGGTTGATGGGTCTGACGG
AGAAACAAGCCGCCGTCGCGCTCTCCCATGCGTGGGCTGATGGCCACCCT
CTGCGCATTTTCCGTCAAAGTCCTAATGCGGGGCCACGCAAGGGCTGGGC
CGCTGGAGATGCCGCCATGCGTGCTGTACACTTGTGCTTACTAGCTCGCG
CCGGCCAGCCAGGCATTCCCAGCGCGCTAACTGAGCCGGAATGGGGGTTT
CTCGCTGTCAGCTTTGGGGGCAAAGAGCTGCAGCTGCCACGTCCTTTCAA
GACCCGGGTGATGGAGGAAGTTTTCTTCAAACTCATCACTGCAGAGGGCC
ACGGCATCTCCGCAGTTCAGGCGGCCATGGCGCTGGCTGAGACCATGGCC
AGCAGGGGGATCGATCCTGCTACTGAAATCAGTCGCATCGATATCCGCAC
GCATGAAGCGGCTGTACGCATCATCGACAAGCAAGGCCCGCTCACCAATG
CGGCCGACCGCGATCACTGCATGCGGTACATGGTCTCGGTGGTGTTGTTG
AAGAACGCGATCATCGAAGCAGAGGACTACCACGATTCGAGCGTGTGGGC
CCATGATCCGCGTGTTGAGGCCCTACGCCAGCGGATCCATATGGCCGAAG
ACCCGCAGTTCACCTACGGCTACCACCACAAAAAGGCGGCCGCCAGCGGA
CTCACCGTCTTTCTGACCAACGGGGAGCAGTTAGACGAAGTAGTCGTCGA
ATACCCAATCGGGCATCCGATGCACGAAGATACTTTGCCTAAGGTGCGCG
CCAAGTTTGAGCGAAACATGCAGGGCCTGTTCACGGCCGAGGAGACAAGC
CGGGTGATCGACGCGATCCATCAGGACAAACTTCCGGTGCATCGATTGGT
CGACCTGCTGGGCCGATGAATGTCTTCCACTTCCGATCGACAGTATGACG
AAACGATAACTCGCCTAGTTGAGTATGTTTATCACTACGAAGTGACCAGC
GACCTCGCTATCCTACGGGCCCGCTATGCCCTCATGGATGCTCTTGGTTG
CGCGCTGGAGACTCTTCAGCAAAGCCCCGAGTGTCGCGCTCTGATCGGCC
CATACACACCAGGTCTGGTCGCCCCTTATGGGTTCAAGCTGCCGGGCACC
TGCCACCAACTTGATCCAGTCAAGGGTGCCTTTGATATGGCAACCTTGAT
TCGCTTCCTGGACCACAACGATGCATACCCTGGTGCTGAATGGGGCCACC
CGTCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019629propionate catabolic process, 2-methylcitrate cycle
Vocabulary: Molecular Function
TermDefinition
GO:00515372 iron, 2 sulfur cluster binding
GO:00475472-methylcitrate dehydratase activity
GO:0016829lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000798CBS51388_000798Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000798-T1CBS51388_000798-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000798-T1.cdsCBS51388_000798-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000798-T1.exon2CBS51388_000798-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000798-T1.exon1CBS51388_000798-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036148
DBxrefInterPro:IPR012705
DBxrefInterPro:IPR042188
DBxrefInterPro:IPR042183
DBxrefInterPro:IPR005656
DBxrefPFAM:PF03972
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2361415..2362913 -
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