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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:2543337..2545243- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000853-T1 ID=CBS51388_000853-T1|Name=CBS51388_000853-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1907bp|location=Sequence derived from alignment at An01:2543337..2545243- (Aspergillus niger CBS 513.88)
ATGGCTACATTGGCAGAGCATCCGGCGGTTGCGCCGTCTTCCTTTGACCA
GGACATCGAGTCTTTCCTCGACCTCGATCAACTAGCATACACCTCCGCAG
AGCCTGCCCGCGCAAAGACCGCCCTGGCTGCTCAACCCACCCTACCAAGC
ACCGAGTTCAACGCTGGCGATGTACGAAGTGCTGGTTTTGCTTCAACAAC
AAGTCAACAAGCCCCGGTCGCATTCCAGGGTCCCAGTCACCAGTATGATG
AACACAAGCAGCAGACCGGCCTGCCTCCAGGTGCCCTGGCTCATGCCATG
ACTTTCAACCACATGAACGGTATGGGATATGGTGCCCCGAGTCCCGGTTT
CCCCATGGGCGCAGACCTCTACCCTAGCAGCCAACTCAAGCGCGAAGAGC
CTCCCATGGATTTCAACAGCCCCCCGACTCGCAACACCTCGGATATGGAC
CTGGAGTCCGACAACATGGGATCGGTTCCTGCCTACTTCATTTCCCCCAA
CCCGAGCAACAAGAGTCAGTTCGTCGACCCCAACGCTTTGGGCGGCCATG
AGGTGGCCTCCATGGGCCCCTCCACTCAAGTCGGACGCATGTATCCGGGT
ATGCACCAGCAGCAGGCTGCCATGGCCAAGGCCGCTCAGCAGCAGAAGCA
CAATGAGTACCTTCGCCAGCAGCACCTTCAGCAACAGCGCCGCATGGACG
AGCACATGCACCACAACGGAGCCCCCCACAGCCAGACCCCTCGCCCCTCC
AACCCCGCTGTTGAGGAACGCATCTCTCGCCTCTTGCAGCAGATGCGCCA
GTCTGCATTGAACTCGCCTGACGACTCCCCCTCTCCCCCTTCCCTCCTGC
CTCAGATGGCCAAGGCCAAGAAGGAGGAGCAGGATATGGATGAGGATGAG
AGACTCTTGGCCAGCGAAGAAGGAAAGAAGCTCAGCAGCAAGGAACGTCG
TCAGCTCCGGAACAAGGTTTCCGCTCGTGCTTTCCGGTCTCGCAGAAAGG
GTATGGATCCAATGGTCGTTGGTGTAATGGCCTGAACATGAAGTAACTGA
CTCGTTATCTAGAATACATTGGTCAGCTCGAGAGCGAGGTTGCCGCCAAG
ACCAACGAAGCCCACGAACTGCGTCTGCAGAACCGTTCCCTCTTTGAGGA
GAACGCCCGTCTCACCGACCTCGCCCGCATGCTCCTGTCGTCCCCTCACT
TCTCTCAGTTCCTGGACGAGATGGGCCCCAACGGTCTTCCCCTGCCGAGC
CAAGTGCAGTCGCAGCCCCACCCTCAGCACCACCAGCACCCTCAGCACCC
GCAACAGGCCCAACCTCAGCAGCAGCCGCCCCAGCAGCAAGCTCCCGCCA
TGACGCAACCGCCTATGCAGCAGGCTCCTCCGGTTGGTATGGTCATGGTT
CCTAACCAGGGACTCGATGTCTCAGCCATGGGTATGAACAACGGTGGCTG
GAACTCGGGTATTGACATGAACTACGGCAATGCCTCCGTGTTCGCCGTTC
TGGAAATCCCTGAGCCCGTTATTGACACCGAGACCCTCTCTGGCAAGACC
TCCAGCATCGTGGACTCTTGCCTTCCCAGCGTTGCCAGCTCCAAGGACGA
GGCTCCTGTTCTCGCCTCTATGCCACCTGTTGCCGAAACCGAGCAGAAGT
CGGACATTGGCGTTGAGAACCCTGATGTCGTGATGGACGAGTCGGACCCT
GCCTTCGCCCTCTTTGCCGATATGCCTGCCGCCCCTACATCGCAAGGATC
TGTTCGTGCTTTCGGTGGTATCGCTACCGGAAAGTCGACGTTTGAGCTTG
TTGTCGAGGGCGAGGTCAAGGACAGTGCCCAACAATTTGCTCATCTTTGC
CACAGCATGGAAGCCGCTTTCGAGCGCGTGTCCATGATGACTGCTCATCT
TTCATGA back to topCoding sequence (CDS) from alignment at An01:2543337..2545243- >CBS51388_000853-T1 ID=CBS51388_000853-T1|Name=CBS51388_000853-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3690bp|location=Sequence derived from alignment at An01:2543337..2545243- (Aspergillus niger CBS 513.88)
AATACATTGGTCAGCTCGAGAGCGAGGTTGCCGCCAAGACCAACGAAGCC
CACGAACTGCGTCTGCAGAACCGTTCCCTCTTTGAGGAGAACGCCCGTCT
CACCGACCTCGCCCGCATGCTCCTGTCGTCCCCTCACTTCTCTCAGTTCC
TGGACGAGATGGGCCCCAACGGTCTTCCCCTGCCGAGCCAAGTGCAGTCG
CAGCCCCACCCTCAGCACCACCAGCACCCTCAGCACCCGCAACAGGCCCA
ACCTCAGCAGCAGCCGCCCCAGCAGCAAGCTCCCGCCATGACGCAACCGC
CTATGCAGCAGGCTCCTCCGGTTGGTATGGTCATGGTTCCTAACCAGGGA
CTCGATGTCTCAGCCATGGGTATGAACAACGGTGGCTGGAACTCGGGTAT
TGACATGAACTACGGCAATGCCTCCGTGTTCGCCGTTCTGGAAATCCCTG
AGCCCGTTATTGACACCGAGACCCTCTCTGGCAAGACCTCCAGCATCGTG
GACTCTTGCCTTCCCAGCGTTGCCAGCTCCAAGGACGAGGCTCCTGTTCT
CGCCTCTATGCCACCTGTTGCCGAAACCGAGCAGAAGTCGGACATTGGCG
TTGAGAACCCTGATGTCGTGATGGACGAGTCGGACCCTGCCTTCGCCCTC
TTTGCCGATATGCCTGCCGCCCCTACATCGCAAGGATCTGTTCGTGCTTT
CGGTGGTATCGCTACCGGAAAGTCGACGTTTGAGCTTGTTGTCGAGGGCG
AGGTCAAGGACAGTGCCCAACAATTTGCTCATCTTTGCCACAGCATGGAA
GCCGCTTTCGAGCGCGTGTCCATGATGACTGCTCATCTTTCATGAATGGC
TACATTGGCAGAGCATCCGGCGGTTGCGCCGTCTTCCTTTGACCAGGACA
TCGAGTCTTTCCTCGACCTCGATCAACTAGCATACACCTCCGCAGAGCCT
GCCCGCGCAAAGACCGCCCTGGCTGCTCAACCCACCCTACCAAGCACCGA
GTTCAACGCTGGCGATGTACGAAGTGCTGGTTTTGCTTCAACAACAAGTC
AACAAGCCCCGGTCGCATTCCAGGGTCCCAGTCACCAGTATGATGAACAC
AAGCAGCAGACCGGCCTGCCTCCAGGTGCCCTGGCTCATGCCATGACTTT
CAACCACATGAACGGTATGGGATATGGTGCCCCGAGTCCCGGTTTCCCCA
TGGGCGCAGACCTCTACCCTAGCAGCCAACTCAAGCGCGAAGAGCCTCCC
ATGGATTTCAACAGCCCCCCGACTCGCAACACCTCGGATATGGACCTGGA
GTCCGACAACATGGGATCGGTTCCTGCCTACTTCATTTCCCCCAACCCGA
GCAACAAGAGTCAGTTCGTCGACCCCAACGCTTTGGGCGGCCATGAGGTG
GCCTCCATGGGCCCCTCCACTCAAGTCGGACGCATGTATCCGGGTATGCA
CCAGCAGCAGGCTGCCATGGCCAAGGCCGCTCAGCAGCAGAAGCACAATG
AGTACCTTCGCCAGCAGCACCTTCAGCAACAGCGCCGCATGGACGAGCAC
ATGCACCACAACGGAGCCCCCCACAGCCAGACCCCTCGCCCCTCCAACCC
CGCTGTTGAGGAACGCATCTCTCGCCTCTTGCAGCAGATGCGCCAGTCTG
CATTGAACTCGCCTGACGACTCCCCCTCTCCCCCTTCCCTCCTGCCTCAG
ATGGCCAAGGCCAAGAAGGAGGAGCAGGATATGGATGAGGATGAGAGACT
CTTGGCCAGCGAAGAAGGAAAGAAGCTCAGCAGCAAGGAACGTCGTCAGC
TCCGGAACAAGGTTTCCGCTCGTGCTTTCCGGTCTCGCAGAAAGGAATAC
ATTGGTCAGCTCGAGAGCGAGGTTGCCGCCAAGACCAACGAAGCCCACGA
ACTGCGTCTGCAGAACCGTTCCCTCTTTGAGGAGAACGCCCGTCTCACCG
ACCTCGCCCGCATGCTCCTGTCGTCCCCTCACTTCTCTCAGTTCCTGGAC
GAGATGGGCCCCAACGGTCTTCCCCTGCCGAGCCAAGTGCAGTCGCAGCC
CCACCCTCAGCACCACCAGCACCCTCAGCACCCGCAACAGGCCCAACCTC
AGCAGCAGCCGCCCCAGCAGCAAGCTCCCGCCATGACGCAACCGCCTATG
CAGCAGGCTCCTCCGGTTGGTATGGTCATGGTTCCTAACCAGGGACTCGA
TGTCTCAGCCATGGGTATGAACAACGGTGGCTGGAACTCGGGTATTGACA
TGAACTACGGCAATGCCTCCGTGTTCGCCGTTCTGGAAATCCCTGAGCCC
GTTATTGACACCGAGACCCTCTCTGGCAAGACCTCCAGCATCGTGGACTC
TTGCCTTCCCAGCGTTGCCAGCTCCAAGGACGAGGCTCCTGTTCTCGCCT
CTATGCCACCTGTTGCCGAAACCGAGCAGAAGTCGGACATTGGCGTTGAG
AACCCTGATGTCGTGATGGACGAGTCGGACCCTGCCTTCGCCCTCTTTGC
CGATATGCCTGCCGCCCCTACATCGCAAGGATCTGTTCGTGCTTTCGGTG
GTATCGCTACCGGAAAGTCGACGTTTGAGCTTGTTGTCGAGGGCGAGGTC
AAGGACAGTGCCCAACAATTTGCTCATCTTTGCCACAGCATGGAAGCCGC
TTTCGAGCGCGTGTCCATGATGACTGCTCATCTTTCATGAATGGCTACAT
TGGCAGAGCATCCGGCGGTTGCGCCGTCTTCCTTTGACCAGGACATCGAG
TCTTTCCTCGACCTCGATCAACTAGCATACACCTCCGCAGAGCCTGCCCG
CGCAAAGACCGCCCTGGCTGCTCAACCCACCCTACCAAGCACCGAGTTCA
ACGCTGGCGATGTACGAAGTGCTGGTTTTGCTTCAACAACAAGTCAACAA
GCCCCGGTCGCATTCCAGGGTCCCAGTCACCAGTATGATGAACACAAGCA
GCAGACCGGCCTGCCTCCAGGTGCCCTGGCTCATGCCATGACTTTCAACC
ACATGAACGGTATGGGATATGGTGCCCCGAGTCCCGGTTTCCCCATGGGC
GCAGACCTCTACCCTAGCAGCCAACTCAAGCGCGAAGAGCCTCCCATGGA
TTTCAACAGCCCCCCGACTCGCAACACCTCGGATATGGACCTGGAGTCCG
ACAACATGGGATCGGTTCCTGCCTACTTCATTTCCCCCAACCCGAGCAAC
AAGAGTCAGTTCGTCGACCCCAACGCTTTGGGCGGCCATGAGGTGGCCTC
CATGGGCCCCTCCACTCAAGTCGGACGCATGTATCCGGGTATGCACCAGC
AGCAGGCTGCCATGGCCAAGGCCGCTCAGCAGCAGAAGCACAATGAGTAC
CTTCGCCAGCAGCACCTTCAGCAACAGCGCCGCATGGACGAGCACATGCA
CCACAACGGAGCCCCCCACAGCCAGACCCCTCGCCCCTCCAACCCCGCTG
TTGAGGAACGCATCTCTCGCCTCTTGCAGCAGATGCGCCAGTCTGCATTG
AACTCGCCTGACGACTCCCCCTCTCCCCCTTCCCTCCTGCCTCAGATGGC
CAAGGCCAAGAAGGAGGAGCAGGATATGGATGAGGATGAGAGACTCTTGG
CCAGCGAAGAAGGAAAGAAGCTCAGCAGCAAGGAACGTCGTCAGCTCCGG
AACAAGGTTTCCGCTCGTGCTTTCCGGTCTCGCAGAAAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | DNA-binding transcription factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004827 |
| DBxref | PFAM:PF00170 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:2543337..2545243 - |
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