You are here

Home

CBS51388_000887-T1, CBS51388_000887-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000887-T1
Unique NameCBS51388_000887-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2632147..2633364-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000887-T1 ID=CBS51388_000887-T1|Name=CBS51388_000887-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1218bp|location=Sequence derived from alignment at An01:2632147..2633364- (Aspergillus niger CBS 513.88)
ATGGCCGACGGCGGAGGCTGGAGCACAATCGAGTCCGACGAGGTACGCAA
TCTGCACATCAAAGCATACATATAGAGCCACAAACCTAACCAGCAAACCT
TTAGGGCGTCTTCACCTCCCTTATCGAGAACCTCGGCGTCAAGGACGTTC
AATTCGAAGAACTGATTTCCCTAGATGCAGACACAATCCGCTCTCTAAGG
TATACCCCTGCTACCTTTTAAACATCACTCACACCCACTAACACCTCTCA
CCATGCAGCCCTGTCTACGGCGTAATCTTCCTCTTCAAATGGATTCGCGA
AACGCAACAACCAACCTCTACATCCTCGACCACCTCACCCCCCTCCGGCA
CCTACGACACCGACCCCTCCCCGAACCTCTTCTTCGCGAACCAAACGATC
CAAAACGCCTGCGGCACGCAAGCCATCCTCTCCGTGATCCTCAACAACGA
CCCGTCCTCCTCCTCTACGAACCCCTTCCCCATCAACATCGGTCCCGAAC
TCCACTCCTTCAAGGACTTCACAGCGGGGTTCCCGCCCGACCTGCGCGGC
GAAGCGCTCTCCAACTCAGAGCTGATCCGGAGCGCGCACAACGCGTTCGC
GCGCGCCTCGCCGTTCGTTGACGAGACAGTGCGGAATAACCAGGATGAGG
AGGGGGATGTATACCATTTCATTGCGTACACGCCTGTTGATGGGAAGTTG
TATGAGTTGGATGGGTTGCAGCCTCATCCGATTTCGCATGGGGGGTGTAC
CGCGGAGGAGTTCCCGGAGAAGGTGATTGAGGTGTTGAGGCAGAGGATTG
CGAGGTACCCGGAGGGGGAGACGAGGTTTAATCTTATGGCTGTGGTGAGG
GATTTGAGGGTCACGGCGAAGGAGATCGGGGATGTGGAGGCGTTGGAGAG
GGAGGAGAGGAAGAGGAGGGCGTGGGCTTGGGAGAATACATTGAGACGGT
CGAATTTCGTTGGGTTTATTGGGGAGGTGTTGAAGGGGGTAGTGGGGATG
AAGGATGCGCAGGGGGAGGGAAAGTATGAGGAGTGGGTGGAGAAGGCGAA
GGGGGAGACGCAGAGGAAGTTGATGAGGAGGTAGGTAGATCATGCCTACT
ATCTATCTTTTGAAGTCTGTCTATTTTGCCGGGGGTGTTAGGATTCTACC
TAGTAAGATCCGTTGAGATTCATAACTATGACATATCTATGTACAGTGGC
AAGGCCGATGTCTGTTGA
back to top

Coding sequence (CDS) from alignment at An01:2632147..2633364-

>CBS51388_000887-T1 ID=CBS51388_000887-T1|Name=CBS51388_000887-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3924bp|location=Sequence derived from alignment at An01:2632147..2633364- (Aspergillus niger CBS 513.88)
TGGCAAGGCCGATGTCTGTTGACCCTGTCTACGGCGTAATCTTCCTCTTC
AAATGGATTCGCGAAACGCAACAACCAACCTCTACATCCTCGACCACCTC
ACCCCCCTCCGGCACCTACGACACCGACCCCTCCCCGAACCTCTTCTTCG
CGAACCAAACGATCCAAAACGCCTGCGGCACGCAAGCCATCCTCTCCGTG
ATCCTCAACAACGACCCGTCCTCCTCCTCTACGAACCCCTTCCCCATCAA
CATCGGTCCCGAACTCCACTCCTTCAAGGACTTCACAGCGGGGTTCCCGC
CCGACCTGCGCGGCGAAGCGCTCTCCAACTCAGAGCTGATCCGGAGCGCG
CACAACGCGTTCGCGCGCGCCTCGCCGTTCGTTGACGAGACAGTGCGGAA
TAACCAGGATGAGGAGGGGGATGTATACCATTTCATTGCGTACACGCCTG
TTGATGGGAAGTTGTATGAGTTGGATGGGTTGCAGCCTCATCCGATTTCG
CATGGGGGGTGTACCGCGGAGGAGTTCCCGGAGAAGGTGATTGAGGTGTT
GAGGCAGAGGATTGCGAGGTACCCGGAGGGGGAGACGAGGTTTAATCTTA
TGGCTGTGGTGAGGGATTTGAGGGTCACGGCGAAGGAGATCGGGGATGTG
GAGGCGTTGGAGAGGGAGGAGAGGAAGAGGAGGGCGTGGGCTTGGGAGAA
TACATTGAGACGGTCGAATTTCGTTGGGTTTATTGGGGAGGTGTTGAAGG
GGGTAGTGGGGATGAAGGATGCGCAGGGGGAGGGAAAGTATGAGGAGTGG
GTGGAGAAGGCGAAGGGGGAGACGCAGAGGAAGTTGATGAGGAGGGCGTC
TTCACCTCCCTTATCGAGAACCTCGGCGTCAAGGACGTTCAATTCGAAGA
ACTGATTTCCCTAGATGCAGACACAATCCGCTCTCTAAGATGGCCGACGG
CGGAGGCTGGAGCACAATCGAGTCCGACGAGTGGCAAGGCCGATGTCTGT
TGACCCTGTCTACGGCGTAATCTTCCTCTTCAAATGGATTCGCGAAACGC
AACAACCAACCTCTACATCCTCGACCACCTCACCCCCCTCCGGCACCTAC
GACACCGACCCCTCCCCGAACCTCTTCTTCGCGAACCAAACGATCCAAAA
CGCCTGCGGCACGCAAGCCATCCTCTCCGTGATCCTCAACAACGACCCGT
CCTCCTCCTCTACGAACCCCTTCCCCATCAACATCGGTCCCGAACTCCAC
TCCTTCAAGGACTTCACAGCGGGGTTCCCGCCCGACCTGCGCGGCGAAGC
GCTCTCCAACTCAGAGCTGATCCGGAGCGCGCACAACGCGTTCGCGCGCG
CCTCGCCGTTCGTTGACGAGACAGTGCGGAATAACCAGGATGAGGAGGGG
GATGTATACCATTTCATTGCGTACACGCCTGTTGATGGGAAGTTGTATGA
GTTGGATGGGTTGCAGCCTCATCCGATTTCGCATGGGGGGTGTACCGCGG
AGGAGTTCCCGGAGAAGGTGATTGAGGTGTTGAGGCAGAGGATTGCGAGG
TACCCGGAGGGGGAGACGAGGTTTAATCTTATGGCTGTGGTGAGGGATTT
GAGGGTCACGGCGAAGGAGATCGGGGATGTGGAGGCGTTGGAGAGGGAGG
AGAGGAAGAGGAGGGCGTGGGCTTGGGAGAATACATTGAGACGGTCGAAT
TTCGTTGGGTTTATTGGGGAGGTGTTGAAGGGGGTAGTGGGGATGAAGGA
TGCGCAGGGGGAGGGAAAGTATGAGGAGTGGGTGGAGAAGGCGAAGGGGG
AGACGCAGAGGAAGTTGATGAGGAGGGCGTCTTCACCTCCCTTATCGAGA
ACCTCGGCGTCAAGGACGTTCAATTCGAAGAACTGATTTCCCTAGATGCA
GACACAATCCGCTCTCTAAGATGGCCGACGGCGGAGGCTGGAGCACAATC
GAGTCCGACGAGTGGCAAGGCCGATGTCTGTTGACCCTGTCTACGGCGTA
ATCTTCCTCTTCAAATGGATTCGCGAAACGCAACAACCAACCTCTACATC
CTCGACCACCTCACCCCCCTCCGGCACCTACGACACCGACCCCTCCCCGA
ACCTCTTCTTCGCGAACCAAACGATCCAAAACGCCTGCGGCACGCAAGCC
ATCCTCTCCGTGATCCTCAACAACGACCCGTCCTCCTCCTCTACGAACCC
CTTCCCCATCAACATCGGTCCCGAACTCCACTCCTTCAAGGACTTCACAG
CGGGGTTCCCGCCCGACCTGCGCGGCGAAGCGCTCTCCAACTCAGAGCTG
ATCCGGAGCGCGCACAACGCGTTCGCGCGCGCCTCGCCGTTCGTTGACGA
GACAGTGCGGAATAACCAGGATGAGGAGGGGGATGTATACCATTTCATTG
CGTACACGCCTGTTGATGGGAAGTTGTATGAGTTGGATGGGTTGCAGCCT
CATCCGATTTCGCATGGGGGGTGTACCGCGGAGGAGTTCCCGGAGAAGGT
GATTGAGGTGTTGAGGCAGAGGATTGCGAGGTACCCGGAGGGGGAGACGA
GGTTTAATCTTATGGCTGTGGTGAGGGATTTGAGGGTCACGGCGAAGGAG
ATCGGGGATGTGGAGGCGTTGGAGAGGGAGGAGAGGAAGAGGAGGGCGTG
GGCTTGGGAGAATACATTGAGACGGTCGAATTTCGTTGGGTTTATTGGGG
AGGTGTTGAAGGGGGTAGTGGGGATGAAGGATGCGCAGGGGGAGGGAAAG
TATGAGGAGTGGGTGGAGAAGGCGAAGGGGGAGACGCAGAGGAAGTTGAT
GAGGAGGGCGTCTTCACCTCCCTTATCGAGAACCTCGGCGTCAAGGACGT
TCAATTCGAAGAACTGATTTCCCTAGATGCAGACACAATCCGCTCTCTAA
GATGGCCGACGGCGGAGGCTGGAGCACAATCGAGTCCGACGAGTGGCAAG
GCCGATGTCTGTTGACCCTGTCTACGGCGTAATCTTCCTCTTCAAATGGA
TTCGCGAAACGCAACAACCAACCTCTACATCCTCGACCACCTCACCCCCC
TCCGGCACCTACGACACCGACCCCTCCCCGAACCTCTTCTTCGCGAACCA
AACGATCCAAAACGCCTGCGGCACGCAAGCCATCCTCTCCGTGATCCTCA
ACAACGACCCGTCCTCCTCCTCTACGAACCCCTTCCCCATCAACATCGGT
CCCGAACTCCACTCCTTCAAGGACTTCACAGCGGGGTTCCCGCCCGACCT
GCGCGGCGAAGCGCTCTCCAACTCAGAGCTGATCCGGAGCGCGCACAACG
CGTTCGCGCGCGCCTCGCCGTTCGTTGACGAGACAGTGCGGAATAACCAG
GATGAGGAGGGGGATGTATACCATTTCATTGCGTACACGCCTGTTGATGG
GAAGTTGTATGAGTTGGATGGGTTGCAGCCTCATCCGATTTCGCATGGGG
GGTGTACCGCGGAGGAGTTCCCGGAGAAGGTGATTGAGGTGTTGAGGCAG
AGGATTGCGAGGTACCCGGAGGGGGAGACGAGGTTTAATCTTATGGCTGT
GGTGAGGGATTTGAGGGTCACGGCGAAGGAGATCGGGGATGTGGAGGCGT
TGGAGAGGGAGGAGAGGAAGAGGAGGGCGTGGGCTTGGGAGAATACATTG
AGACGGTCGAATTTCGTTGGGTTTATTGGGGAGGTGTTGAAGGGGGTAGT
GGGGATGAAGGATGCGCAGGGGGAGGGAAAGTATGAGGAGTGGGTGGAGA
AGGCGAAGGGGGAGACGCAGAGGAAGTTGATGAGGAGGGCGTCTTCACCT
CCCTTATCGAGAACCTCGGCGTCAAGGACGTTCAATTCGAAGAACTGATT
TCCCTAGATGCAGACACAATCCGCTCTCTAAGATGGCCGACGGCGGAGGC
TGGAGCACAATCGAGTCCGACGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016579protein deubiquitination
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004843thiol-dependent ubiquitin-specific protease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000887CBS51388_000887Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000887-T1CBS51388_000887-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000887-T1.cdsCBS51388_000887-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000887-T1.exon4CBS51388_000887-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_000887-T1.exon3CBS51388_000887-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_000887-T1.exon2CBS51388_000887-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000887-T1.exon1CBS51388_000887-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteMEROPS:MER0013494
DBxrefInterPro:IPR038765
DBxrefInterPro:IPR017390
DBxrefInterPro:IPR041507
DBxrefInterPro:IPR036959
DBxrefInterPro:IPR001578
DBxrefPFAM:PF18031
DBxrefPFAM:PF01088
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2632147..2633364 -
Powered by Drupal