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CBS51388_000897-T1, CBS51388_000897-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000897-T1
Unique NameCBS51388_000897-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2650607..2652483-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000897-T1 ID=CBS51388_000897-T1|Name=CBS51388_000897-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1877bp|location=Sequence derived from alignment at An01:2650607..2652483- (Aspergillus niger CBS 513.88)
ATGCCCCCCAAATCTAGCGGCGTTGCCAAGCAACGTACCTCGCGTCGGAA
GATTGCATTGGCGTGCGATCCATGCCGGGAGAAAAAGATCCGCTGTGATG
GCGGCAAACCGATCTGTGGGTCATGCGACCGAAAGTCCTGGGGCATTGCC
CAATGCTCCTACAGCATGGATAACCCCAGGACCGCTAGTCAGGATGAGTG
AGTCCTTCCTCACAACGTAACCAGCGTTTTCGCTGACCGCACAGGTACAT
CCGGGTCCTACGGTCGCGGATCAATAACTCGAGGATTTATGTCTTCGTGC
CGGAGTGTCAGCACCGGAAATACGCAGGGACTCACCACACCAGAAAGACT
CTCCTACACATGAAACTCTACATCTGGATCGGAATCGGGATGGGCAGTCG
AGGTCTTCAAGGGTCACCCAAGGTAGCCCAGTGCCTCAGGAGAGTAACAA
CAGTCTCCACGATGAGCGGCATGCAGATGGCCAGAGCCTTGATACTTCAG
GAACAGTCCCAAGTGACCATCAGGCCCGGAATTCTCTTTCCCTTCCCGAA
GCAGAAGAGGCATCTCAAAGGATGTCCGACCACCTTCGGAACAATCCGAA
CCGCAATCCCCTCCGTGGGAAGCAAATGTACGTCTCATCCCAAACAAGAT
CCGCATCTCCCCACTTGGACACCCCTGGCCGTGTCACGGCAATGGGCCAA
ATCGCGACGCCAGATGATACCTTGGCATCTCCAGCTCCACTTCGGGAATA
TTATGGATCTTCCTCCATTGCATCACTGATGAGGTTTGCACGGATGTCTG
TCCCGTTGCGATCTTCGCGCTCGGCCAAAGGTAGTCCTAATAACTCAATG
GATTACCAGTATCACGAGTCCCCTAACACACAGTACCGGATCAGTGACTT
CACACTTCCACCCCGCTCACTAGCAGATCACCTCTTAAAATGCTTTTGGG
ACCGTGTAGCCTGTATCTACCCTTTCTTCGATCGGCCCAGCTTCGAGAAA
GCGTATGATAACCTGTGGAGATCGGAAAGGGAGGGGATGAACAAGCTACC
GGACATGCATATCGGCCTCGGAGGGAAGTCGGACTCATCTCCCAAGTCTA
TCGTGTTCTATTGTGCTCTAAATGTGATGTTTGCGCTTGGTTGCCATTTT
TCGGACCTTCCGCTGCAGGAGCGAGAGGCAACAGCCCACTCCTTCTTCCT
ACGCTGCAAACGCTTCGTAGGCCTTGATCTCCTTGAGATCCATACAGTCG
GAGTAGTTCAGACTCTCCTTATTGTCGCGCTCTACTTGCAGAGTAGCCCG
TATCCCAGTAGGTGCTGGAATGCCATTGGGATAGCATGCCGTCTTGCACA
AGGCCTGGGCTTACATGAGGCCCATAACGTGTCCTCGATGACAGTGCTGG
AGACAGAAGTACGCCGGAGGACATGGCATGGCTGTGTGATGCTAGATGTG
TAAGTACTTCACTGCCGATGGCTCTCTCCAACCTAACTGACTTCTACCTA
GGTTCGTGAGCATGACACACGGTCGGCCAAGCATGACCAGTCATCTGGCC
CCGATTCCGTTGCCTTATGCCACAGGCGAAGATGTCCCTCTGACCATGGG
GTTTTACGTGGCAACGATCAAGCTCTATCGAATTCTTGATAGAATTCTCT
CAGACGTGTATAACATGTGGCGAGGTCGGATGAATGAGGAATCGAAAAGG
TCGACACGATGGTCCGAAGGCAACTTCGATTCGCTCCTAGAACTGGAACG
GCAGCTACAGTATTTTAAAAGCAATCTTCCACCCTATCTGAGCTGGAGCG
CTTCTAGTCGTCCAGAGTGCACCCCTGACGAATCGGATATTCTAGAGCGC
CAGCGAAACATCCTTCGTTCACGCTAA
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Coding sequence (CDS) from alignment at An01:2650607..2652483-

>CBS51388_000897-T1 ID=CBS51388_000897-T1|Name=CBS51388_000897-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6924bp|location=Sequence derived from alignment at An01:2650607..2652483- (Aspergillus niger CBS 513.88)
GTTCGTGAGCATGACACACGGTCGGCCAAGCATGACCAGTCATCTGGCCC
CGATTCCGTTGCCTTATGCCACAGGCGAAGATGTCCCTCTGACCATGGGG
TTTTACGTGGCAACGATCAAGCTCTATCGAATTCTTGATAGAATTCTCTC
AGACGTGTATAACATGTGGCGAGGTCGGATGAATGAGGAATCGAAAAGGT
CGACACGATGGTCCGAAGGCAACTTCGATTCGCTCCTAGAACTGGAACGG
CAGCTACAGTATTTTAAAAGCAATCTTCCACCCTATCTGAGCTGGAGCGC
TTCTAGTCGTCCAGAGTGCACCCCTGACGAATCGGATATTCTAGAGCGCC
AGCGAAACATCCTTCGTTCACGCTAAAAAGACTCTCCTACACATGAAACT
CTACATCTGGATCGGAATCGGGATGGGCAGTCGAGGTCTTCAAGGGTCAC
CCAAGGTAGCCCAGTGCCTCAGGAGAGTAACAACAGTCTCCACGATGAGC
GGCATGCAGATGGCCAGAGCCTTGATACTTCAGGAACAGTCCCAAGTGAC
CATCAGGCCCGGAATTCTCTTTCCCTTCCCGAAGCAGAAGAGGCATCTCA
AAGGATGTCCGACCACCTTCGGAACAATCCGAACCGCAATCCCCTCCGTG
GGAAGCAAATGTACGTCTCATCCCAAACAAGATCCGCATCTCCCCACTTG
GACACCCCTGGCCGTGTCACGGCAATGGGCCAAATCGCGACGCCAGATGA
TACCTTGGCATCTCCAGCTCCACTTCGGGAATATTATGGATCTTCCTCCA
TTGCATCACTGATGAGGTTTGCACGGATGTCTGTCCCGTTGCGATCTTCG
CGCTCGGCCAAAGGTAGTCCTAATAACTCAATGGATTACCAGTATCACGA
GTCCCCTAACACACAGTACCGGATCAGTGACTTCACACTTCCACCCCGCT
CACTAGCAGATCACCTCTTAAAATGCTTTTGGGACCGTGTAGCCTGTATC
TACCCTTTCTTCGATCGGCCCAGCTTCGAGAAAGCGTATGATAACCTGTG
GAGATCGGAAAGGGAGGGGATGAACAAGCTACCGGACATGCATATCGGCC
TCGGAGGGAAGTCGGACTCATCTCCCAAGTCTATCGTGTTCTATTGTGCT
CTAAATGTGATGTTTGCGCTTGGTTGCCATTTTTCGGACCTTCCGCTGCA
GGAGCGAGAGGCAACAGCCCACTCCTTCTTCCTACGCTGCAAACGCTTCG
TAGGCCTTGATCTCCTTGAGATCCATACAGTCGGAGTAGTTCAGACTCTC
CTTATTGTCGCGCTCTACTTGCAGAGTAGCCCGTATCCCAGTAGGTGCTG
GAATGCCATTGGGATAGCATGCCGTCTTGCACAAGGCCTGGGCTTACATG
AGGCCCATAACGTGTCCTCGATGACAGTGCTGGAGACAGAAGTACGCCGG
AGGACATGGCATGGCTGTGTGATGCTAGATGTGTACATCCGGGTCCTACG
GTCGCGGATCAATAACTCGAGGATTTATGTCTTCATGCCCCCCAAATCTA
GCGGCGTTGCCAAGCAACGTACCTCGCGTCGGAAGATTGCATTGGCGTGC
GATCCATGCCGGGAGAAAAAGATCCGCTGTGATGGCGGCAAACCGATCTG
TGGGTCATGCGACCGAAAGTCCTGGGGCATTGCCCAATGCTCCTACAGCA
TGGATAACCCCAGGACCGCTAGTCAGGATGAGTTCGTGAGCATGACACAC
GGTCGGCCAAGCATGACCAGTCATCTGGCCCCGATTCCGTTGCCTTATGC
CACAGGCGAAGATGTCCCTCTGACCATGGGGTTTTACGTGGCAACGATCA
AGCTCTATCGAATTCTTGATAGAATTCTCTCAGACGTGTATAACATGTGG
CGAGGTCGGATGAATGAGGAATCGAAAAGGTCGACACGATGGTCCGAAGG
CAACTTCGATTCGCTCCTAGAACTGGAACGGCAGCTACAGTATTTTAAAA
GCAATCTTCCACCCTATCTGAGCTGGAGCGCTTCTAGTCGTCCAGAGTGC
ACCCCTGACGAATCGGATATTCTAGAGCGCCAGCGAAACATCCTTCGTTC
ACGCTAAAAAGACTCTCCTACACATGAAACTCTACATCTGGATCGGAATC
GGGATGGGCAGTCGAGGTCTTCAAGGGTCACCCAAGGTAGCCCAGTGCCT
CAGGAGAGTAACAACAGTCTCCACGATGAGCGGCATGCAGATGGCCAGAG
CCTTGATACTTCAGGAACAGTCCCAAGTGACCATCAGGCCCGGAATTCTC
TTTCCCTTCCCGAAGCAGAAGAGGCATCTCAAAGGATGTCCGACCACCTT
CGGAACAATCCGAACCGCAATCCCCTCCGTGGGAAGCAAATGTACGTCTC
ATCCCAAACAAGATCCGCATCTCCCCACTTGGACACCCCTGGCCGTGTCA
CGGCAATGGGCCAAATCGCGACGCCAGATGATACCTTGGCATCTCCAGCT
CCACTTCGGGAATATTATGGATCTTCCTCCATTGCATCACTGATGAGGTT
TGCACGGATGTCTGTCCCGTTGCGATCTTCGCGCTCGGCCAAAGGTAGTC
CTAATAACTCAATGGATTACCAGTATCACGAGTCCCCTAACACACAGTAC
CGGATCAGTGACTTCACACTTCCACCCCGCTCACTAGCAGATCACCTCTT
AAAATGCTTTTGGGACCGTGTAGCCTGTATCTACCCTTTCTTCGATCGGC
CCAGCTTCGAGAAAGCGTATGATAACCTGTGGAGATCGGAAAGGGAGGGG
ATGAACAAGCTACCGGACATGCATATCGGCCTCGGAGGGAAGTCGGACTC
ATCTCCCAAGTCTATCGTGTTCTATTGTGCTCTAAATGTGATGTTTGCGC
TTGGTTGCCATTTTTCGGACCTTCCGCTGCAGGAGCGAGAGGCAACAGCC
CACTCCTTCTTCCTACGCTGCAAACGCTTCGTAGGCCTTGATCTCCTTGA
GATCCATACAGTCGGAGTAGTTCAGACTCTCCTTATTGTCGCGCTCTACT
TGCAGAGTAGCCCGTATCCCAGTAGGTGCTGGAATGCCATTGGGATAGCA
TGCCGTCTTGCACAAGGCCTGGGCTTACATGAGGCCCATAACGTGTCCTC
GATGACAGTGCTGGAGACAGAAGTACGCCGGAGGACATGGCATGGCTGTG
TGATGCTAGATGTGTACATCCGGGTCCTACGGTCGCGGATCAATAACTCG
AGGATTTATGTCTTCATGCCCCCCAAATCTAGCGGCGTTGCCAAGCAACG
TACCTCGCGTCGGAAGATTGCATTGGCGTGCGATCCATGCCGGGAGAAAA
AGATCCGCTGTGATGGCGGCAAACCGATCTGTGGGTCATGCGACCGAAAG
TCCTGGGGCATTGCCCAATGCTCCTACAGCATGGATAACCCCAGGACCGC
TAGTCAGGATGAGTTCGTGAGCATGACACACGGTCGGCCAAGCATGACCA
GTCATCTGGCCCCGATTCCGTTGCCTTATGCCACAGGCGAAGATGTCCCT
CTGACCATGGGGTTTTACGTGGCAACGATCAAGCTCTATCGAATTCTTGA
TAGAATTCTCTCAGACGTGTATAACATGTGGCGAGGTCGGATGAATGAGG
AATCGAAAAGGTCGACACGATGGTCCGAAGGCAACTTCGATTCGCTCCTA
GAACTGGAACGGCAGCTACAGTATTTTAAAAGCAATCTTCCACCCTATCT
GAGCTGGAGCGCTTCTAGTCGTCCAGAGTGCACCCCTGACGAATCGGATA
TTCTAGAGCGCCAGCGAAACATCCTTCGTTCACGCTAAAAAGACTCTCCT
ACACATGAAACTCTACATCTGGATCGGAATCGGGATGGGCAGTCGAGGTC
TTCAAGGGTCACCCAAGGTAGCCCAGTGCCTCAGGAGAGTAACAACAGTC
TCCACGATGAGCGGCATGCAGATGGCCAGAGCCTTGATACTTCAGGAACA
GTCCCAAGTGACCATCAGGCCCGGAATTCTCTTTCCCTTCCCGAAGCAGA
AGAGGCATCTCAAAGGATGTCCGACCACCTTCGGAACAATCCGAACCGCA
ATCCCCTCCGTGGGAAGCAAATGTACGTCTCATCCCAAACAAGATCCGCA
TCTCCCCACTTGGACACCCCTGGCCGTGTCACGGCAATGGGCCAAATCGC
GACGCCAGATGATACCTTGGCATCTCCAGCTCCACTTCGGGAATATTATG
GATCTTCCTCCATTGCATCACTGATGAGGTTTGCACGGATGTCTGTCCCG
TTGCGATCTTCGCGCTCGGCCAAAGGTAGTCCTAATAACTCAATGGATTA
CCAGTATCACGAGTCCCCTAACACACAGTACCGGATCAGTGACTTCACAC
TTCCACCCCGCTCACTAGCAGATCACCTCTTAAAATGCTTTTGGGACCGT
GTAGCCTGTATCTACCCTTTCTTCGATCGGCCCAGCTTCGAGAAAGCGTA
TGATAACCTGTGGAGATCGGAAAGGGAGGGGATGAACAAGCTACCGGACA
TGCATATCGGCCTCGGAGGGAAGTCGGACTCATCTCCCAAGTCTATCGTG
TTCTATTGTGCTCTAAATGTGATGTTTGCGCTTGGTTGCCATTTTTCGGA
CCTTCCGCTGCAGGAGCGAGAGGCAACAGCCCACTCCTTCTTCCTACGCT
GCAAACGCTTCGTAGGCCTTGATCTCCTTGAGATCCATACAGTCGGAGTA
GTTCAGACTCTCCTTATTGTCGCGCTCTACTTGCAGAGTAGCCCGTATCC
CAGTAGGTGCTGGAATGCCATTGGGATAGCATGCCGTCTTGCACAAGGCC
TGGGCTTACATGAGGCCCATAACGTGTCCTCGATGACAGTGCTGGAGACA
GAAGTACGCCGGAGGACATGGCATGGCTGTGTGATGCTAGATGTGTACAT
CCGGGTCCTACGGTCGCGGATCAATAACTCGAGGATTTATGTCTTCATGC
CCCCCAAATCTAGCGGCGTTGCCAAGCAACGTACCTCGCGTCGGAAGATT
GCATTGGCGTGCGATCCATGCCGGGAGAAAAAGATCCGCTGTGATGGCGG
CAAACCGATCTGTGGGTCATGCGACCGAAAGTCCTGGGGCATTGCCCAAT
GCTCCTACAGCATGGATAACCCCAGGACCGCTAGTCAGGATGAGTTCGTG
AGCATGACACACGGTCGGCCAAGCATGACCAGTCATCTGGCCCCGATTCC
GTTGCCTTATGCCACAGGCGAAGATGTCCCTCTGACCATGGGGTTTTACG
TGGCAACGATCAAGCTCTATCGAATTCTTGATAGAATTCTCTCAGACGTG
TATAACATGTGGCGAGGTCGGATGAATGAGGAATCGAAAAGGTCGACACG
ATGGTCCGAAGGCAACTTCGATTCGCTCCTAGAACTGGAACGGCAGCTAC
AGTATTTTAAAAGCAATCTTCCACCCTATCTGAGCTGGAGCGCTTCTAGT
CGTCCAGAGTGCACCCCTGACGAATCGGATATTCTAGAGCGCCAGCGAAA
CATCCTTCGTTCACGCTAAAAAGACTCTCCTACACATGAAACTCTACATC
TGGATCGGAATCGGGATGGGCAGTCGAGGTCTTCAAGGGTCACCCAAGGT
AGCCCAGTGCCTCAGGAGAGTAACAACAGTCTCCACGATGAGCGGCATGC
AGATGGCCAGAGCCTTGATACTTCAGGAACAGTCCCAAGTGACCATCAGG
CCCGGAATTCTCTTTCCCTTCCCGAAGCAGAAGAGGCATCTCAAAGGATG
TCCGACCACCTTCGGAACAATCCGAACCGCAATCCCCTCCGTGGGAAGCA
AATGTACGTCTCATCCCAAACAAGATCCGCATCTCCCCACTTGGACACCC
CTGGCCGTGTCACGGCAATGGGCCAAATCGCGACGCCAGATGATACCTTG
GCATCTCCAGCTCCACTTCGGGAATATTATGGATCTTCCTCCATTGCATC
ACTGATGAGGTTTGCACGGATGTCTGTCCCGTTGCGATCTTCGCGCTCGG
CCAAAGGTAGTCCTAATAACTCAATGGATTACCAGTATCACGAGTCCCCT
AACACACAGTACCGGATCAGTGACTTCACACTTCCACCCCGCTCACTAGC
AGATCACCTCTTAAAATGCTTTTGGGACCGTGTAGCCTGTATCTACCCTT
TCTTCGATCGGCCCAGCTTCGAGAAAGCGTATGATAACCTGTGGAGATCG
GAAAGGGAGGGGATGAACAAGCTACCGGACATGCATATCGGCCTCGGAGG
GAAGTCGGACTCATCTCCCAAGTCTATCGTGTTCTATTGTGCTCTAAATG
TGATGTTTGCGCTTGGTTGCCATTTTTCGGACCTTCCGCTGCAGGAGCGA
GAGGCAACAGCCCACTCCTTCTTCCTACGCTGCAAACGCTTCGTAGGCCT
TGATCTCCTTGAGATCCATACAGTCGGAGTAGTTCAGACTCTCCTTATTG
TCGCGCTCTACTTGCAGAGTAGCCCGTATCCCAGTAGGTGCTGGAATGCC
ATTGGGATAGCATGCCGTCTTGCACAAGGCCTGGGCTTACATGAGGCCCA
TAACGTGTCCTCGATGACAGTGCTGGAGACAGAAGTACGCCGGAGGACAT
GGCATGGCTGTGTGATGCTAGATGTGTACATCCGGGTCCTACGGTCGCGG
ATCAATAACTCGAGGATTTATGTCTTCATGCCCCCCAAATCTAGCGGCGT
TGCCAAGCAACGTACCTCGCGTCGGAAGATTGCATTGGCGTGCGATCCAT
GCCGGGAGAAAAAGATCCGCTGTGATGGCGGCAAACCGATCTGTGGGTCA
TGCGACCGAAAGTCCTGGGGCATTGCCCAATGCTCCTACAGCATGGATAA
CCCCAGGACCGCTAGTCAGGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677DNA binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000897CBS51388_000897Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000897-T1CBS51388_000897-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000897-T1.cdsCBS51388_000897-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000897-T1.exon4CBS51388_000897-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_000897-T1.exon3CBS51388_000897-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_000897-T1.exon2CBS51388_000897-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000897-T1.exon1CBS51388_000897-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2650607..2652483 -
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