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CBS51388_000986-T1, CBS51388_000986-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000986-T1
Unique NameCBS51388_000986-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2879790..2881036-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000986-T1 ID=CBS51388_000986-T1|Name=CBS51388_000986-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1247bp|location=Sequence derived from alignment at An01:2879790..2881036- (Aspergillus niger CBS 513.88)
ATGGCATTCGGTGGTCCTCGTGGTGGTGGCCGTGGTGGTGGCCGTGGTGC
TCCTCGTGGAGGTGGTGGCGGCCGTGGTGGTAGAGGTTTGTTCACCATCG
ATTGATTTCATCTTGGGAGAAACGTGGCAGGCAGGCATATGTGATCTTTT
CGCATTGTTGTTGTCGATCATGTTGGAACTTGCTTCTTGTGACGGAGAAC
CTTGTTCTTGTCCCAGAGCATATCAGGTTTTCCAATATGAGCGACTCGAC
TCGCGTGCCGGAACTGCGGTTATCCCTTCACGGAAAAAAGGAACATGTCG
CTAATCTTTGCACGTTCTATAGGCGGTCTTGGTGCCGGTGGTCGTGGTCG
CGGCGGTGGCCGTGGTGCTCCCCGCGGTGGTCGTGGTGCCCCCCGTGGCC
GTGGTGGTCCTCGCGGCGGTGGTCGCGGCGGTGCTAAGGGTGCCAAGGGT
GGTGCTAAGGTCATCATTGTAGGTGTTTCCTGTTAAATCGATCGAGAAGA
GAGACGTTGTATGGAGTCTAACCGGGTTTCGTCTAGGAACCCCACCGTCA
CGCTGGTGTCTTCGTCGCCCGTGGTGGTAAGGAAGATTTGCTCGTCACCA
AGAACCTTACTCCCGGAGAGGCCGTCTACGGTGAGAAGCGCATCTCTGTT
GAGTCCCCCGCTGAGGAGGATGGCACTGTGACCAAGACCGAATACCGTGT
CTGGAACCCCTTCCGTTCCAAGTTGGCTGCCGGTATCCTGGGTGGTCTGG
ATGACATCTACATGCGCCCTGGCTCCAAGGTCCTGTATCTCGGTTCCGCC
AGCGGTACCTCCGTCAGTCACGTTGCCGATATCGTCGGACCTACTGGTAA
CGTCTACGCTGTTGAGTTCTCCCACCGTTCCGGCCGTGACTTGATCGGCA
TGGCTACCCACCGCACCAACGTTATCCCCATCGTCGAGGACGCCAGACAC
CCTCTTCGTTACCGTATGCTCGTCCCCATGGTCGATGTCATCTTCGCCGA
TGTTGCCCAGCCCGACCAGGCCCGTATTGTCGGCCTGAACGCCCACATGT
TCCTCAAGGAGGGCGGTGGTGTCATTGTCTCCGTCAAGGCCAACTGTATC
GACAGTACCGCTAAGCCCGAGGTTGTGTTCGCTCGTGAAGTCCAGAAGAT
GAGAGAGGAGCGGATCAAGCCCAGGGAACAGCTGACCCTGGAGCCTTTCG
AACGTGACCACTGTATAGTGTCTGGTATCTACAAGCGCTCTGCATGA
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Coding sequence (CDS) from alignment at An01:2879790..2881036-

>CBS51388_000986-T1 ID=CBS51388_000986-T1|Name=CBS51388_000986-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2826bp|location=Sequence derived from alignment at An01:2879790..2881036- (Aspergillus niger CBS 513.88)
GAACCCCACCGTCACGCTGGTGTCTTCGTCGCCCGTGGTGGTAAGGAAGA
TTTGCTCGTCACCAAGAACCTTACTCCCGGAGAGGCCGTCTACGGTGAGA
AGCGCATCTCTGTTGAGTCCCCCGCTGAGGAGGATGGCACTGTGACCAAG
ACCGAATACCGTGTCTGGAACCCCTTCCGTTCCAAGTTGGCTGCCGGTAT
CCTGGGTGGTCTGGATGACATCTACATGCGCCCTGGCTCCAAGGTCCTGT
ATCTCGGTTCCGCCAGCGGTACCTCCGTCAGTCACGTTGCCGATATCGTC
GGACCTACTGGTAACGTCTACGCTGTTGAGTTCTCCCACCGTTCCGGCCG
TGACTTGATCGGCATGGCTACCCACCGCACCAACGTTATCCCCATCGTCG
AGGACGCCAGACACCCTCTTCGTTACCGTATGCTCGTCCCCATGGTCGAT
GTCATCTTCGCCGATGTTGCCCAGCCCGACCAGGCCCGTATTGTCGGCCT
GAACGCCCACATGTTCCTCAAGGAGGGCGGTGGTGTCATTGTCTCCGTCA
AGGCCAACTGTATCGACAGTACCGCTAAGCCCGAGGTTGTGTTCGCTCGT
GAAGTCCAGAAGATGAGAGAGGAGCGGATCAAGCCCAGGGAACAGCTGAC
CCTGGAGCCTTTCGAACGTGACCACTGTATAGTGTCTGGTATCTACAAGC
GCTCTGCATGAGCGGTCTTGGTGCCGGTGGTCGTGGTCGCGGCGGTGGCC
GTGGTGCTCCCCGCGGTGGTCGTGGTGCCCCCCGTGGCCGTGGTGGTCCT
CGCGGCGGTGGTCGCGGCGGTGCTAAGGGTGCCAAGGGTGGTGCTAAGGT
CATCATTATGGCATTCGGTGGTCCTCGTGGTGGTGGCCGTGGTGGTGGCC
GTGGTGCTCCTCGTGGAGGTGGTGGCGGCCGTGGTGGTAGAGGAACCCCA
CCGTCACGCTGGTGTCTTCGTCGCCCGTGGTGGTAAGGAAGATTTGCTCG
TCACCAAGAACCTTACTCCCGGAGAGGCCGTCTACGGTGAGAAGCGCATC
TCTGTTGAGTCCCCCGCTGAGGAGGATGGCACTGTGACCAAGACCGAATA
CCGTGTCTGGAACCCCTTCCGTTCCAAGTTGGCTGCCGGTATCCTGGGTG
GTCTGGATGACATCTACATGCGCCCTGGCTCCAAGGTCCTGTATCTCGGT
TCCGCCAGCGGTACCTCCGTCAGTCACGTTGCCGATATCGTCGGACCTAC
TGGTAACGTCTACGCTGTTGAGTTCTCCCACCGTTCCGGCCGTGACTTGA
TCGGCATGGCTACCCACCGCACCAACGTTATCCCCATCGTCGAGGACGCC
AGACACCCTCTTCGTTACCGTATGCTCGTCCCCATGGTCGATGTCATCTT
CGCCGATGTTGCCCAGCCCGACCAGGCCCGTATTGTCGGCCTGAACGCCC
ACATGTTCCTCAAGGAGGGCGGTGGTGTCATTGTCTCCGTCAAGGCCAAC
TGTATCGACAGTACCGCTAAGCCCGAGGTTGTGTTCGCTCGTGAAGTCCA
GAAGATGAGAGAGGAGCGGATCAAGCCCAGGGAACAGCTGACCCTGGAGC
CTTTCGAACGTGACCACTGTATAGTGTCTGGTATCTACAAGCGCTCTGCA
TGAGCGGTCTTGGTGCCGGTGGTCGTGGTCGCGGCGGTGGCCGTGGTGCT
CCCCGCGGTGGTCGTGGTGCCCCCCGTGGCCGTGGTGGTCCTCGCGGCGG
TGGTCGCGGCGGTGCTAAGGGTGCCAAGGGTGGTGCTAAGGTCATCATTA
TGGCATTCGGTGGTCCTCGTGGTGGTGGCCGTGGTGGTGGCCGTGGTGCT
CCTCGTGGAGGTGGTGGCGGCCGTGGTGGTAGAGGAACCCCACCGTCACG
CTGGTGTCTTCGTCGCCCGTGGTGGTAAGGAAGATTTGCTCGTCACCAAG
AACCTTACTCCCGGAGAGGCCGTCTACGGTGAGAAGCGCATCTCTGTTGA
GTCCCCCGCTGAGGAGGATGGCACTGTGACCAAGACCGAATACCGTGTCT
GGAACCCCTTCCGTTCCAAGTTGGCTGCCGGTATCCTGGGTGGTCTGGAT
GACATCTACATGCGCCCTGGCTCCAAGGTCCTGTATCTCGGTTCCGCCAG
CGGTACCTCCGTCAGTCACGTTGCCGATATCGTCGGACCTACTGGTAACG
TCTACGCTGTTGAGTTCTCCCACCGTTCCGGCCGTGACTTGATCGGCATG
GCTACCCACCGCACCAACGTTATCCCCATCGTCGAGGACGCCAGACACCC
TCTTCGTTACCGTATGCTCGTCCCCATGGTCGATGTCATCTTCGCCGATG
TTGCCCAGCCCGACCAGGCCCGTATTGTCGGCCTGAACGCCCACATGTTC
CTCAAGGAGGGCGGTGGTGTCATTGTCTCCGTCAAGGCCAACTGTATCGA
CAGTACCGCTAAGCCCGAGGTTGTGTTCGCTCGTGAAGTCCAGAAGATGA
GAGAGGAGCGGATCAAGCCCAGGGAACAGCTGACCCTGGAGCCTTTCGAA
CGTGACCACTGTATAGTGTCTGGTATCTACAAGCGCTCTGCATGAGCGGT
CTTGGTGCCGGTGGTCGTGGTCGCGGCGGTGGCCGTGGTGCTCCCCGCGG
TGGTCGTGGTGCCCCCCGTGGCCGTGGTGGTCCTCGCGGCGGTGGTCGCG
GCGGTGCTAAGGGTGCCAAGGGTGGTGCTAAGGTCATCATTATGGCATTC
GGTGGTCCTCGTGGTGGTGGCCGTGGTGGTGGCCGTGGTGCTCCTCGTGG
AGGTGGTGGCGGCCGTGGTGGTAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NOP1CBS51388_000986Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000986-T1CBS51388_000986-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000986-T1.cdsCBS51388_000986-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000986-T1.exon3CBS51388_000986-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_000986-T1.exon2CBS51388_000986-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000986-T1.exon1CBS51388_000986-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG092648VW
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR000692
DBxrefPFAM:PF01269
ProductSmall subunit processome complex component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2879790..2881036 -
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