|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:2904020..2905996- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000994-T1 ID=CBS51388_000994-T1|Name=CBS51388_000994-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1977bp|location=Sequence derived from alignment at An01:2904020..2905996- (Aspergillus niger CBS 513.88)
ATGGAGTCCAGAACCGCGACGGCTGAGCCGTCGAGTAAACGACCGCGCTC
ACCTTCCGGCGATTTCCCTCCTATCGCATCCAAGGTTCCCAAAACCCATT
CCAATCACCTGCAGATCAACTACCTCGCCCGCCAATACCCTGACAACCTT
CCTCTCGTCTCCGTCGATGATACCATGCCCGCCATTGTGCATCTCATTGG
TGAGTACGACGGCGTCTTACATCGTCACGAAAGCATCGCTGGGAACTTGG
GCGCCTGTCCGCTGGGGCCCATCTTGATCAAGCGCTTTGAGCGCTTGTTC
GATGGGCCGCCTCGCGTGCTCAAGTCGCATGGCAAGGACTCCCCCAACGT
GACCTGGCTGGATGTAGTCGAGTTTGCCAAGAACAAACCTGAGCAGTTCA
ACCTGGAAAAGTCGCGCAACGGGGTGCGAGTGTGCCAATTCTATACCAAG
CAGTGTCGGGTGGAGATCAGCGAGGAGGACTTTGTGTTGATCGCCTCGGG
GATGCCCCAGAAGATGATCCCCCCGCAGCCGATCATTGAGGATGAGGAGA
AGGAATTGGGCGCATTGGAGATTCTGGAGAAGAACCTCCAGCAGATCATC
CAGATGGCCGACCAGGGTATGACCTTTGACATGATTTTTTGTATTACAGT
CTAAAACTAATCATCGTTGCTAGTGTCTGCCCGCGCCCGACAACTGAACC
ACCGTTTGAAAAACCGCCGAACGGCGATTGTCACTCGGCGGGAGAACGAC
ATGTCGCTCCACTCGCAGCGACAGCAACAACAACAACAGCAGCAACAACA
TCGTTCCATCAGCCCTGCCTGGCGCGATGCCAATGGCCATGCCCAGAATC
CAAATGGCAGTACCCCTGCTAGCGCCCAGTCTCCCTCCACTGGTTTTGTT
GCCGTGAATGCCGGCCGGCCCGGCGGCGGAGAAGCCACTGTGGAGGAGAA
TGCGCTGTCATCGCAGTTTATGTTCTCGCATTCCAATACGGACAACGTTA
CTATCATCAACGGCACCTCGATCAAAGGCGCCTCGCCGACGACCCGCGCC
GAGCTCATGAAAAAGTTCTTCACAACTCAGGATCGGCAGGCGCGCAGCAT
TGAAGAGGGACCCGGCTCCAATAGCCGGCAGTCTTCCCGGCCGCGGCCGC
GAGCGTCGGATGCGGCGGACTACAATCTGTACACTCCGGCACCGACTACG
GTTGCTATTCCCAATACACCGTCGTCGCTTCTGCCTCCGCCCAAGTCCCA
CCACCACGAAAAGGATGACGGCGGCCCGCACAAGATGGAGATGGTGGCGC
GCATGGAAGAACTACAGCGGGGCGAGCGCATCTTGCCGCCCTGCGATCGC
TGTCGTCGGCTACACATGGATTGTCTGAAGAACCTGACCGCCTGCATGGG
GTGCACCAAGAAACACGCCAAGTGTTCCTGGAAGGACGTGAAGGAGGACG
AGCTACGTGAGACGCGCGTCGACCGCACGTCCCGGGAGCGAGCGGAGGAG
CCGCCTTCGTCCAAGGAGGCCTCTGCGACCCATCCACTGCCCACTCCTGT
GGCAGCACCACCGTCGTCGACGGCAGCCCCCACCCCGGTGTCTGGGCCAC
TGTTGCCCGAGACGGAGCCGCGACCTCGCGAGCGCGAGATTGCGTCCGAG
TACAGCGTGCGCCGCGAGTCTGCGCCGACGGGCGGACCGATTGCGGGGAT
GGCGCTGGCCAAGGAGACGTCACCGCGGCGAGCCATGAGCGAGATGCATG
GGAGCAGCGGGATGAGCCACGAGCGGCGGGTCAGCCTGCATCGGCACGCG
GAGGCGGACGACGATGATCCGGATGCCAACCAGCGGCTGATGCAGGCGAT
TCTGGATACGGTGGACCACCACACGCGGGTGGCGGCGGCGGTGAAGGAGG
GGCATGAAGTGAGCAACGAGCGGGAGCGGGAGCGCGAGCAGGAACGAGAG
CGGGAGCGGAAGTTGGTGCGGGCGTAG back to topCoding sequence (CDS) from alignment at An01:2904020..2905996- >CBS51388_000994-T1 ID=CBS51388_000994-T1|Name=CBS51388_000994-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3840bp|location=Sequence derived from alignment at An01:2904020..2905996- (Aspergillus niger CBS 513.88)
TGTCTGCCCGCGCCCGACAACTGAACCACCGTTTGAAAAACCGCCGAACG
GCGATTGTCACTCGGCGGGAGAACGACATGTCGCTCCACTCGCAGCGACA
GCAACAACAACAACAGCAGCAACAACATCGTTCCATCAGCCCTGCCTGGC
GCGATGCCAATGGCCATGCCCAGAATCCAAATGGCAGTACCCCTGCTAGC
GCCCAGTCTCCCTCCACTGGTTTTGTTGCCGTGAATGCCGGCCGGCCCGG
CGGCGGAGAAGCCACTGTGGAGGAGAATGCGCTGTCATCGCAGTTTATGT
TCTCGCATTCCAATACGGACAACGTTACTATCATCAACGGCACCTCGATC
AAAGGCGCCTCGCCGACGACCCGCGCCGAGCTCATGAAAAAGTTCTTCAC
AACTCAGGATCGGCAGGCGCGCAGCATTGAAGAGGGACCCGGCTCCAATA
GCCGGCAGTCTTCCCGGCCGCGGCCGCGAGCGTCGGATGCGGCGGACTAC
AATCTGTACACTCCGGCACCGACTACGGTTGCTATTCCCAATACACCGTC
GTCGCTTCTGCCTCCGCCCAAGTCCCACCACCACGAAAAGGATGACGGCG
GCCCGCACAAGATGGAGATGGTGGCGCGCATGGAAGAACTACAGCGGGGC
GAGCGCATCTTGCCGCCCTGCGATCGCTGTCGTCGGCTACACATGGATTG
TCTGAAGAACCTGACCGCCTGCATGGGGTGCACCAAGAAACACGCCAAGT
GTTCCTGGAAGGACGTGAAGGAGGACGAGCTACGTGAGACGCGCGTCGAC
CGCACGTCCCGGGAGCGAGCGGAGGAGCCGCCTTCGTCCAAGGAGGCCTC
TGCGACCCATCCACTGCCCACTCCTGTGGCAGCACCACCGTCGTCGACGG
CAGCCCCCACCCCGGTGTCTGGGCCACTGTTGCCCGAGACGGAGCCGCGA
CCTCGCGAGCGCGAGATTGCGTCCGAGTACAGCGTGCGCCGCGAGTCTGC
GCCGACGGGCGGACCGATTGCGGGGATGGCGCTGGCCAAGGAGACGTCAC
CGCGGCGAGCCATGAGCGAGATGCATGGGAGCAGCGGGATGAGCCACGAG
CGGCGGGTCAGCCTGCATCGGCACGCGGAGGCGGACGACGATGATCCGGA
TGCCAACCAGCGGCTGATGCAGGCGATTCTGGATACGGTGGACCACCACA
CGCGGGTGGCGGCGGCGGTGAAGGAGGGGCATGAAGTGAGCAACGAGCGG
GAGCGGGAGCGCGAGCAGGAACGAGAGCGGGAGCGGAAGTTGGTGCGGGC
GTAGATGGAGTCCAGAACCGCGACGGCTGAGCCGTCGAGTAAACGACCGC
GCTCACCTTCCGGCGATTTCCCTCCTATCGCATCCAAGGTTCCCAAAACC
CATTCCAATCACCTGCAGATCAACTACCTCGCCCGCCAATACCCTGACAA
CCTTCCTCTCGTCTCCGTCGATGATACCATGCCCGCCATTGTGCATCTCA
TTGGTGAGTACGACGGCGTCTTACATCGTCACGAAAGCATCGCTGGGAAC
TTGGGCGCCTGTCCGCTGGGGCCCATCTTGATCAAGCGCTTTGAGCGCTT
GTTCGATGGGCCGCCTCGCGTGCTCAAGTCGCATGGCAAGGACTCCCCCA
ACGTGACCTGGCTGGATGTAGTCGAGTTTGCCAAGAACAAACCTGAGCAG
TTCAACCTGGAAAAGTCGCGCAACGGGGTGCGAGTGTGCCAATTCTATAC
CAAGCAGTGTCGGGTGGAGATCAGCGAGGAGGACTTTGTGTTGATCGCCT
CGGGGATGCCCCAGAAGATGATCCCCCCGCAGCCGATCATTGAGGATGAG
GAGAAGGAATTGGGCGCATTGGAGATTCTGGAGAAGAACCTCCAGCAGAT
CATCCAGATGGCCGACCAGGTGTCTGCCCGCGCCCGACAACTGAACCACC
GTTTGAAAAACCGCCGAACGGCGATTGTCACTCGGCGGGAGAACGACATG
TCGCTCCACTCGCAGCGACAGCAACAACAACAACAGCAGCAACAACATCG
TTCCATCAGCCCTGCCTGGCGCGATGCCAATGGCCATGCCCAGAATCCAA
ATGGCAGTACCCCTGCTAGCGCCCAGTCTCCCTCCACTGGTTTTGTTGCC
GTGAATGCCGGCCGGCCCGGCGGCGGAGAAGCCACTGTGGAGGAGAATGC
GCTGTCATCGCAGTTTATGTTCTCGCATTCCAATACGGACAACGTTACTA
TCATCAACGGCACCTCGATCAAAGGCGCCTCGCCGACGACCCGCGCCGAG
CTCATGAAAAAGTTCTTCACAACTCAGGATCGGCAGGCGCGCAGCATTGA
AGAGGGACCCGGCTCCAATAGCCGGCAGTCTTCCCGGCCGCGGCCGCGAG
CGTCGGATGCGGCGGACTACAATCTGTACACTCCGGCACCGACTACGGTT
GCTATTCCCAATACACCGTCGTCGCTTCTGCCTCCGCCCAAGTCCCACCA
CCACGAAAAGGATGACGGCGGCCCGCACAAGATGGAGATGGTGGCGCGCA
TGGAAGAACTACAGCGGGGCGAGCGCATCTTGCCGCCCTGCGATCGCTGT
CGTCGGCTACACATGGATTGTCTGAAGAACCTGACCGCCTGCATGGGGTG
CACCAAGAAACACGCCAAGTGTTCCTGGAAGGACGTGAAGGAGGACGAGC
TACGTGAGACGCGCGTCGACCGCACGTCCCGGGAGCGAGCGGAGGAGCCG
CCTTCGTCCAAGGAGGCCTCTGCGACCCATCCACTGCCCACTCCTGTGGC
AGCACCACCGTCGTCGACGGCAGCCCCCACCCCGGTGTCTGGGCCACTGT
TGCCCGAGACGGAGCCGCGACCTCGCGAGCGCGAGATTGCGTCCGAGTAC
AGCGTGCGCCGCGAGTCTGCGCCGACGGGCGGACCGATTGCGGGGATGGC
GCTGGCCAAGGAGACGTCACCGCGGCGAGCCATGAGCGAGATGCATGGGA
GCAGCGGGATGAGCCACGAGCGGCGGGTCAGCCTGCATCGGCACGCGGAG
GCGGACGACGATGATCCGGATGCCAACCAGCGGCTGATGCAGGCGATTCT
GGATACGGTGGACCACCACACGCGGGTGGCGGCGGCGGTGAAGGAGGGGC
ATGAAGTGAGCAACGAGCGGGAGCGGGAGCGCGAGCAGGAACGAGAGCGG
GAGCGGAAGTTGGTGCGGGCGTAGATGGAGTCCAGAACCGCGACGGCTGA
GCCGTCGAGTAAACGACCGCGCTCACCTTCCGGCGATTTCCCTCCTATCG
CATCCAAGGTTCCCAAAACCCATTCCAATCACCTGCAGATCAACTACCTC
GCCCGCCAATACCCTGACAACCTTCCTCTCGTCTCCGTCGATGATACCAT
GCCCGCCATTGTGCATCTCATTGGTGAGTACGACGGCGTCTTACATCGTC
ACGAAAGCATCGCTGGGAACTTGGGCGCCTGTCCGCTGGGGCCCATCTTG
ATCAAGCGCTTTGAGCGCTTGTTCGATGGGCCGCCTCGCGTGCTCAAGTC
GCATGGCAAGGACTCCCCCAACGTGACCTGGCTGGATGTAGTCGAGTTTG
CCAAGAACAAACCTGAGCAGTTCAACCTGGAAAAGTCGCGCAACGGGGTG
CGAGTGTGCCAATTCTATACCAAGCAGTGTCGGGTGGAGATCAGCGAGGA
GGACTTTGTGTTGATCGCCTCGGGGATGCCCCAGAAGATGATCCCCCCGC
AGCCGATCATTGAGGATGAGGAGAAGGAATTGGGCGCATTGGAGATTCTG
GAGAAGAACCTCCAGCAGATCATCCAGATGGCCGACCAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001138 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:2904020..2905996 - |
|
