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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:3375798..3376469+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001134-T1 ID=CBS51388_001134-T1|Name=CBS51388_001134-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=672bp|location=Sequence derived from alignment at An01:3375798..3376469+ (Aspergillus niger CBS 513.88)
ATGGTCAAGACTTCCGTCCTCAACGATGCGCTTAACGCCATCAACAACGC
CGAGAAGAGCGGTCGCCGTCAGGTCCTGATCCGCCCTTCCTCCAAGGTCA
TCATCAAGTTCCTTTCCGTCATGCAGAAGCACGGTACGTTCATGTCTACA
ACATCACCAACATCGTGAAACAAGGAGTTCCGGGCACTTGCAAGGTCGAG
CCGCCAAGGAGGTGATGAAAAATTCGGGTTGATAACTAGGCGACGGTTAT
AGACCAACCACGGCTTTCGCCCTTTAAGTGCCCGAGATATTGACAAGTGT
TGTTTACAACATGGCGGCGATCTTACAAGTTTCCGGAACTCTTTATTTCT
TCTGTGTTTGGTTAACTTTTAAATCACCGCAACAAATTGCTGACTCTTTT
TTCCTTCTTCAGGCTACATTGGCGAGTTCGAGGAGGTTGACGACCACCGC
TCCGGCAAGATCGTCATCCAGCTCAACGGCCGTCTGAACAAGTGCGGTGT
CATCAACCCCCGCTACCCCGTTCAGCTCCGTGACCTCGAGAAGTGGGCCA
CTCAGCTCCTGCCCTCCCGTCAGTTCGGTTACGTTGTCCTGACCACCTCC
GCTGGTATCATGGACCACGAGGAGGCTCGCCGCAAGCACGTTGCCGGCAA
GCTCCTCGGTTTCTTCTACTAA back to topCoding sequence (CDS) from alignment at An01:3375798..3376469+ >CBS51388_001134-T1 ID=CBS51388_001134-T1|Name=CBS51388_001134-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=786bp|location=Sequence derived from alignment at An01:3375798..3376469+ (Aspergillus niger CBS 513.88)
ATGGTCAAGACTTCCGTCCTCAACGATGCGCTTAACGCCATCAACAACGC
CGAGAAGAGCGGTCGCCGTCAGGTCCTGATCCGCCCTTCCTCCAAGGTCA
TCATCAAGTTCCTTTCCGTCATGCAGAAGCACGGCTACATTGGCGAGTTC
GAGGAGGTTGACGACCACCGCTCCGGCAAGATCGTCATCCAGCTCAACGG
CCGTCTGAACAAGTGCGGTGTCATCAACCCCCGCTACCCCGTTCAGCTCC
GTGACCTCGAGAAGTGGGCCACTCAGCTCCTGCCCTCCCGTCAGTTCGGT
TACGTTGTCCTGACCACCTCCGCTGGTATCATGGACCACGAGGAGGCTCG
CCGCAAGCACGTTGCCGGCAAGCTCCTCGGTTTCTTCTACTAAATGGTCA
AGACTTCCGTCCTCAACGATGCGCTTAACGCCATCAACAACGCCGAGAAG
AGCGGTCGCCGTCAGGTCCTGATCCGCCCTTCCTCCAAGGTCATCATCAA
GTTCCTTTCCGTCATGCAGAAGCACGGCTACATTGGCGAGTTCGAGGAGG
TTGACGACCACCGCTCCGGCAAGATCGTCATCCAGCTCAACGGCCGTCTG
AACAAGTGCGGTGTCATCAACCCCCGCTACCCCGTTCAGCTCCGTGACCT
CGAGAAGTGGGCCACTCAGCTCCTGCCCTCCCGTCAGTTCGGTTACGTTG
TCCTGACCACCTCCGCTGGTATCATGGACCACGAGGAGGCTCGCCGCAAG
CACGTTGCCGGCAAGCTCCTCGGTTTCTTCTACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035987 |
| DBxref | InterPro:IPR000630 |
| DBxref | PFAM:PF00410 |
| Product | 40S ribosomal protein S22 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:3375798..3376469 + |
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