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CBS51388_001200-T1, CBS51388_001200-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001200-T1
Unique NameCBS51388_001200-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:3561999..3564405-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001200-T1 ID=CBS51388_001200-T1|Name=CBS51388_001200-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2407bp|location=Sequence derived from alignment at An01:3561999..3564405- (Aspergillus niger CBS 513.88)
ATGACGGCCAGCGAGGAAGCCTCCTCCCCCGCCACGCGCGCGCGAAAGAT
CCGAAAGGTGACCCGCGCCTGCGATGCTTGCAAGGCCAAAAAGAAGGCTT
GTACGGGCAACATCCCCTGTGGTCCCTGCTCCCGCCGTCACTTGGCATGC
ACCTACGACTCCGCCTACAATCGAGGTGTGGCGCTCAGCCCTCCTCCCTC
AACATTGCGTCCCAAGAACCATCGTCCACTGCGGGAGCCCGACAGGTCAT
GTAGCAATCCAGATCCGGCCTCAGATGTGATCCAGCCACTGCAGTCGCCC
CCTGCACTTCGTTCAGCCATCGAGTATGTACGGCCAGGCTTGCAGATCAG
CCCTGCATCGGGGCCAGGCATACTCCCCGAGTCTGCTATTGTCGATGCAT
CTGTTCGACGAGGCTCAGTAGACGGGACAGGTCAGTACTGGGGTCCAAGC
TCAGCACATTCATTTCTGGGCAGGGTAGTGGAGGACTTGCATGCCACTCC
CTCCAAATCCATTGCTCCTGCACCAGAGCCCGATGCCTCAGCAACGGTCT
CCATCTTTTCCCACGGTGATCGTGTGGTCCCGGAGGTTCGGCTATCAGAT
TTTGTCTGGCCAGACCAAACCAAGGCCAAAAGTCTGATCCGCCGATATTT
CGAGTTTGCAGCACCGACCTACCGCGTGCTCCATCAGCCTACGCTCCATG
CCATGGTACAACGCCTGTACCAGGAGGGCTCGGAGGGCTATCGGATCGGT
AGCCAGCTCGATGTAGCATCCCAGGCCGTCGTGCTCTTGCTTCTGAGTAC
TGCAGCCATGTTCCGAGTCGACGAAGACGGGCGCATGAGAGACGCCGACG
ACGATGGCTGGCGCAAGAGCGAGCTTTACTACGCACAAGCGGAGCATCTG
CTGTCGCTCGAGACGGGTGCCCCTACTCTGGCATCGGTGCAAGCTCGTTT
CCTGATGGTGCTGTATCTGCTGAGCTCCTCTCGAGCCCAGAAGGCGTGGT
TCGTGTTTGGCACAACAGTCCAGCTGATGATGGCCCTTGGTTTGCACAAT
CGACGGGCGAGGAGGCTCCATGAAGAAGAAGAGGATCTGGTGCAGCAGGA
GTGTCAACGGCGCCTTGTCTGGTGCTCTTACACCCTGGACAAGTATCTCA
GCGTGATCCTTGGTCGACCACGATTGTGGCATGACGAAGACTTGGATGAA
GATCTTCCCACACGCGTCAATGACGAGGACCTGACGATGCGGGAAAGGCG
ATTGACCAGACGTGATTGTGTGATGGACGCGCCGGTCTTTCATGCGGTAT
TGGCACAAATTCTCACCCAGGCAGCCAAAAAACCCTACGTTCTCGCGGGT
CTCTCCGATCAGATGGAGATTGAGACCATCCGAGGCCTGTGTGGTGAGGT
CGCGAAATGGCAAGCGGAACTGCCTCCTTTTCTTTCGGGGGTCATCCAGC
CCAGTAGTTTGGTTCCGGTGTTTCGGCGCCAGCTGACTGTTTTGCAGCTG
GCTCGTTATCATGCCTTGATGTTCATCACGCGACCTCTCTTATTGCGGGA
TTATGGGCAAATGTGGCCTGAGCACCGAAGCAGTTACCGATACCACCTGC
ATCTGTGTCTCACCGCAGCGCGAGAAGCAATCGAATCGATCCTTGGATTT
GTGCGCGAGGATGAATTGTTTCCAGCATTTTGGTACTCACAGTACATCGC
ATTCAATGCTTTGTCCATCATCTATCTATACCTGATCCAGGTCAGACGCA
ACCGTCTGCCATCTGCGAGTCTCGACTTCGTCGCGAGCCCGGAATACGCC
TTGCACACGGATTTGGACGAATCCATGTTGTATAGACTGTCTGAGACGGC
AGTGACACACCTCGCCGACGCAACAGCTCGCAACGCTCCTTCTTGGAAAT
ACAGTGTCATTTTGCAGGGTCTGCGACACGAGCTGGCCCGCCTTGGGCCC
CCAATATTGGAAAATGACGACGCTCACGCTACAGAACCGATTGCGTTATC
CCGTCCAGTTCCCGAATCGATTCCTCGTCCGACCGAACATGGAGGTGAGA
CGGGTCGCCATGAACAGCAGGCAGGGCCCGCCGCAGTCGGAGATTATAAC
CTTGATCCGAACGGGCTGCCGCCCATATTCGCGGGGCTGGACCCCGCTGT
TGATCCAGGGTTGCTCGATCCGAGGACCCAGTCCCTCTTGGACACTTTCG
TTATGGGCGAAAACGTGGTGCTTGACTTCTGGCCACAATTGGAAAGTCTA
CCTATCAGTAAGTCTTATCATGCCGGCGTCGATGAAGGCCATCAATAAGT
GCTAATTGACCCAGCATATCCCGGTTGATATTGGATGTGATACAGGAGCC
GAAGTGCGACTGGGCTCCGACACCGTCAACTACGGGACTTGTGTACACCT
ATCATAA
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Coding sequence (CDS) from alignment at An01:3561999..3564405-

>CBS51388_001200-T1 ID=CBS51388_001200-T1|Name=CBS51388_001200-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4638bp|location=Sequence derived from alignment at An01:3561999..3564405- (Aspergillus niger CBS 513.88)
GAGCCGAAGTGCGACTGGGCTCCGACACCGTCAACTACGGGACTTGTGTA
CACCTATCATAAATGACGGCCAGCGAGGAAGCCTCCTCCCCCGCCACGCG
CGCGCGAAAGATCCGAAAGGTGACCCGCGCCTGCGATGCTTGCAAGGCCA
AAAAGAAGGCTTGTACGGGCAACATCCCCTGTGGTCCCTGCTCCCGCCGT
CACTTGGCATGCACCTACGACTCCGCCTACAATCGAGGTGTGGCGCTCAG
CCCTCCTCCCTCAACATTGCGTCCCAAGAACCATCGTCCACTGCGGGAGC
CCGACAGGTCATGTAGCAATCCAGATCCGGCCTCAGATGTGATCCAGCCA
CTGCAGTCGCCCCCTGCACTTCGTTCAGCCATCGAGTATGTACGGCCAGG
CTTGCAGATCAGCCCTGCATCGGGGCCAGGCATACTCCCCGAGTCTGCTA
TTGTCGATGCATCTGTTCGACGAGGCTCAGTAGACGGGACAGGTCAGTAC
TGGGGTCCAAGCTCAGCACATTCATTTCTGGGCAGGGTAGTGGAGGACTT
GCATGCCACTCCCTCCAAATCCATTGCTCCTGCACCAGAGCCCGATGCCT
CAGCAACGGTCTCCATCTTTTCCCACGGTGATCGTGTGGTCCCGGAGGTT
CGGCTATCAGATTTTGTCTGGCCAGACCAAACCAAGGCCAAAAGTCTGAT
CCGCCGATATTTCGAGTTTGCAGCACCGACCTACCGCGTGCTCCATCAGC
CTACGCTCCATGCCATGGTACAACGCCTGTACCAGGAGGGCTCGGAGGGC
TATCGGATCGGTAGCCAGCTCGATGTAGCATCCCAGGCCGTCGTGCTCTT
GCTTCTGAGTACTGCAGCCATGTTCCGAGTCGACGAAGACGGGCGCATGA
GAGACGCCGACGACGATGGCTGGCGCAAGAGCGAGCTTTACTACGCACAA
GCGGAGCATCTGCTGTCGCTCGAGACGGGTGCCCCTACTCTGGCATCGGT
GCAAGCTCGTTTCCTGATGGTGCTGTATCTGCTGAGCTCCTCTCGAGCCC
AGAAGGCGTGGTTCGTGTTTGGCACAACAGTCCAGCTGATGATGGCCCTT
GGTTTGCACAATCGACGGGCGAGGAGGCTCCATGAAGAAGAAGAGGATCT
GGTGCAGCAGGAGTGTCAACGGCGCCTTGTCTGGTGCTCTTACACCCTGG
ACAAGTATCTCAGCGTGATCCTTGGTCGACCACGATTGTGGCATGACGAA
GACTTGGATGAAGATCTTCCCACACGCGTCAATGACGAGGACCTGACGAT
GCGGGAAAGGCGATTGACCAGACGTGATTGTGTGATGGACGCGCCGGTCT
TTCATGCGGTATTGGCACAAATTCTCACCCAGGCAGCCAAAAAACCCTAC
GTTCTCGCGGGTCTCTCCGATCAGATGGAGATTGAGACCATCCGAGGCCT
GTGTGGTGAGGTCGCGAAATGGCAAGCGGAACTGCCTCCTTTTCTTTCGG
GGGTCATCCAGCCCAGTAGTTTGGTTCCGGTGTTTCGGCGCCAGCTGACT
GTTTTGCAGCTGGCTCGTTATCATGCCTTGATGTTCATCACGCGACCTCT
CTTATTGCGGGATTATGGGCAAATGTGGCCTGAGCACCGAAGCAGTTACC
GATACCACCTGCATCTGTGTCTCACCGCAGCGCGAGAAGCAATCGAATCG
ATCCTTGGATTTGTGCGCGAGGATGAATTGTTTCCAGCATTTTGGTACTC
ACAGTACATCGCATTCAATGCTTTGTCCATCATCTATCTATACCTGATCC
AGGTCAGACGCAACCGTCTGCCATCTGCGAGTCTCGACTTCGTCGCGAGC
CCGGAATACGCCTTGCACACGGATTTGGACGAATCCATGTTGTATAGACT
GTCTGAGACGGCAGTGACACACCTCGCCGACGCAACAGCTCGCAACGCTC
CTTCTTGGAAATACAGTGTCATTTTGCAGGGTCTGCGACACGAGCTGGCC
CGCCTTGGGCCCCCAATATTGGAAAATGACGACGCTCACGCTACAGAACC
GATTGCGTTATCCCGTCCAGTTCCCGAATCGATTCCTCGTCCGACCGAAC
ATGGAGGTGAGACGGGTCGCCATGAACAGCAGGCAGGGCCCGCCGCAGTC
GGAGATTATAACCTTGATCCGAACGGGCTGCCGCCCATATTCGCGGGGCT
GGACCCCGCTGTTGATCCAGGGTTGCTCGATCCGAGGACCCAGTCCCTCT
TGGACACTTTCGTTATGGGCGAAAACGTGGTGCTTGACTTCTGGCCACAA
TTGGAAAGTCTACCTATCAGAGCCGAAGTGCGACTGGGCTCCGACACCGT
CAACTACGGGACTTGTGTACACCTATCATAAATGACGGCCAGCGAGGAAG
CCTCCTCCCCCGCCACGCGCGCGCGAAAGATCCGAAAGGTGACCCGCGCC
TGCGATGCTTGCAAGGCCAAAAAGAAGGCTTGTACGGGCAACATCCCCTG
TGGTCCCTGCTCCCGCCGTCACTTGGCATGCACCTACGACTCCGCCTACA
ATCGAGGTGTGGCGCTCAGCCCTCCTCCCTCAACATTGCGTCCCAAGAAC
CATCGTCCACTGCGGGAGCCCGACAGGTCATGTAGCAATCCAGATCCGGC
CTCAGATGTGATCCAGCCACTGCAGTCGCCCCCTGCACTTCGTTCAGCCA
TCGAGTATGTACGGCCAGGCTTGCAGATCAGCCCTGCATCGGGGCCAGGC
ATACTCCCCGAGTCTGCTATTGTCGATGCATCTGTTCGACGAGGCTCAGT
AGACGGGACAGGTCAGTACTGGGGTCCAAGCTCAGCACATTCATTTCTGG
GCAGGGTAGTGGAGGACTTGCATGCCACTCCCTCCAAATCCATTGCTCCT
GCACCAGAGCCCGATGCCTCAGCAACGGTCTCCATCTTTTCCCACGGTGA
TCGTGTGGTCCCGGAGGTTCGGCTATCAGATTTTGTCTGGCCAGACCAAA
CCAAGGCCAAAAGTCTGATCCGCCGATATTTCGAGTTTGCAGCACCGACC
TACCGCGTGCTCCATCAGCCTACGCTCCATGCCATGGTACAACGCCTGTA
CCAGGAGGGCTCGGAGGGCTATCGGATCGGTAGCCAGCTCGATGTAGCAT
CCCAGGCCGTCGTGCTCTTGCTTCTGAGTACTGCAGCCATGTTCCGAGTC
GACGAAGACGGGCGCATGAGAGACGCCGACGACGATGGCTGGCGCAAGAG
CGAGCTTTACTACGCACAAGCGGAGCATCTGCTGTCGCTCGAGACGGGTG
CCCCTACTCTGGCATCGGTGCAAGCTCGTTTCCTGATGGTGCTGTATCTG
CTGAGCTCCTCTCGAGCCCAGAAGGCGTGGTTCGTGTTTGGCACAACAGT
CCAGCTGATGATGGCCCTTGGTTTGCACAATCGACGGGCGAGGAGGCTCC
ATGAAGAAGAAGAGGATCTGGTGCAGCAGGAGTGTCAACGGCGCCTTGTC
TGGTGCTCTTACACCCTGGACAAGTATCTCAGCGTGATCCTTGGTCGACC
ACGATTGTGGCATGACGAAGACTTGGATGAAGATCTTCCCACACGCGTCA
ATGACGAGGACCTGACGATGCGGGAAAGGCGATTGACCAGACGTGATTGT
GTGATGGACGCGCCGGTCTTTCATGCGGTATTGGCACAAATTCTCACCCA
GGCAGCCAAAAAACCCTACGTTCTCGCGGGTCTCTCCGATCAGATGGAGA
TTGAGACCATCCGAGGCCTGTGTGGTGAGGTCGCGAAATGGCAAGCGGAA
CTGCCTCCTTTTCTTTCGGGGGTCATCCAGCCCAGTAGTTTGGTTCCGGT
GTTTCGGCGCCAGCTGACTGTTTTGCAGCTGGCTCGTTATCATGCCTTGA
TGTTCATCACGCGACCTCTCTTATTGCGGGATTATGGGCAAATGTGGCCT
GAGCACCGAAGCAGTTACCGATACCACCTGCATCTGTGTCTCACCGCAGC
GCGAGAAGCAATCGAATCGATCCTTGGATTTGTGCGCGAGGATGAATTGT
TTCCAGCATTTTGGTACTCACAGTACATCGCATTCAATGCTTTGTCCATC
ATCTATCTATACCTGATCCAGGTCAGACGCAACCGTCTGCCATCTGCGAG
TCTCGACTTCGTCGCGAGCCCGGAATACGCCTTGCACACGGATTTGGACG
AATCCATGTTGTATAGACTGTCTGAGACGGCAGTGACACACCTCGCCGAC
GCAACAGCTCGCAACGCTCCTTCTTGGAAATACAGTGTCATTTTGCAGGG
TCTGCGACACGAGCTGGCCCGCCTTGGGCCCCCAATATTGGAAAATGACG
ACGCTCACGCTACAGAACCGATTGCGTTATCCCGTCCAGTTCCCGAATCG
ATTCCTCGTCCGACCGAACATGGAGGTGAGACGGGTCGCCATGAACAGCA
GGCAGGGCCCGCCGCAGTCGGAGATTATAACCTTGATCCGAACGGGCTGC
CGCCCATATTCGCGGGGCTGGACCCCGCTGTTGATCCAGGGTTGCTCGAT
CCGAGGACCCAGTCCCTCTTGGACACTTTCGTTATGGGCGAAAACGTGGT
GCTTGACTTCTGGCCACAATTGGAAAGTCTACCTATCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677DNA binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001200CBS51388_001200Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001200-T1CBS51388_001200-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001200-T1.cdsCBS51388_001200-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001200-T1.exon2CBS51388_001200-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001200-T1.exon1CBS51388_001200-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteantiSMASH:Cluster_1.7
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:3561999..3564405 -
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