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CBS51388_001315-T1, CBS51388_001315-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001315-T1
Unique NameCBS51388_001315-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:224059..225148-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001315-T1 ID=CBS51388_001315-T1|Name=CBS51388_001315-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1090bp|location=Sequence derived from alignment at An02:224059..225148- (Aspergillus niger CBS 513.88)
ATGGCTACAGTTCCACAACTGATCACTCGCCAGGTTCAACTCCAATACTT
CTTGGGTGACCTGCGCTCTGCAGGTGTTACTCTGTCAATAGCCACACGGC
TTCTATATGCACTGGGTGCTCATATATTACCCACTAAGGCCACCCCCTCT
CGCGCCCCTGTCTATGATAAGAGCGACATCAGATGCCACCTGCGAGATCT
ATTCTGGCTCTGCTATTCATTCGACAAGGATATATGCATCAGGACAGGCC
AACCACCATCTTTAAACGACACGCACTGCGACTTGAGTCTGCCCGATGAT
TATGTGCAGCTGCAAAACATCAACCTCCAGCACGACATGCCTCCTGTCAA
TGACAACACTATTCCTCTCTATCCTTGGGATCTTCGTTTGTCTATGCTAA
AATCCAGAATATATGAGGGCCTTTATTCAGCAGTCTCTCTCTATCAGAGT
GCATCTCAGTTGCTATCGAGTATCCGAGCTCTAGATGAAACATTAGAGCA
ATGGAGGGTGTCCCTTCCCTCGGATTTTCGGCCCACGCTGTATTTTTCTG
ACGACACACACATCAGTGCCAATGTGAATACCCAGGCGGTGATGCTCAGG
TTAGCATACTATCACTGCGTCACCTCAATCCACCAAGCAGCAAACCGCTA
TCGCAACTCAGCCTTGGACCCCGCAGGTACATGGCTGAGCGGCATAACTT
CTAGCATTAATCTGTCTATCACTGCCAGTCGGTCAACGCTGTCTTATCTC
AAGAGAGTGCTGCCCATTATAAAGGGGAAATGTTTCTGGTACGTCATCAG
AGAACATACATCATGCTGGAAGGATCTGACCTCTCCTGAATTATAGGATC
ATACTATTCTACGCTATCACCGCAGTGTTGACTCTCTTTTGCGATACCAT
CTCTGACCCGCATGGCCCTGATGTACATCACAATGTCGAGCTATTGCAAG
ATGTTCCTGGGTTAATCCATCGCGTCCCTGTCCGACACCTAGCACTTGGG
GAACTCACTCACCTGCAGTATTTGAACGGATTTACTACGGAGCTTGCTGC
CATTTGTGTGCGCGCCACATCGAAGGCGCGAAGGGGATAG
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Coding sequence (CDS) from alignment at An02:224059..225148-

>CBS51388_001315-T1 ID=CBS51388_001315-T1|Name=CBS51388_001315-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2064bp|location=Sequence derived from alignment at An02:224059..225148- (Aspergillus niger CBS 513.88)
GATCATACTATTCTACGCTATCACCGCAGTGTTGACTCTCTTTTGCGATA
CCATCTCTGACCCGCATGGCCCTGATGTACATCACAATGTCGAGCTATTG
CAAGATGTTCCTGGGTTAATCCATCGCGTCCCTGTCCGACACCTAGCACT
TGGGGAACTCACTCACCTGCAGTATTTGAACGGATTTACTACGGAGCTTG
CTGCCATTTGTGTGCGCGCCACATCGAAGGCGCGAAGGGGATAGATGGCT
ACAGTTCCACAACTGATCACTCGCCAGGTTCAACTCCAATACTTCTTGGG
TGACCTGCGCTCTGCAGGTGTTACTCTGTCAATAGCCACACGGCTTCTAT
ATGCACTGGGTGCTCATATATTACCCACTAAGGCCACCCCCTCTCGCGCC
CCTGTCTATGATAAGAGCGACATCAGATGCCACCTGCGAGATCTATTCTG
GCTCTGCTATTCATTCGACAAGGATATATGCATCAGGACAGGCCAACCAC
CATCTTTAAACGACACGCACTGCGACTTGAGTCTGCCCGATGATTATGTG
CAGCTGCAAAACATCAACCTCCAGCACGACATGCCTCCTGTCAATGACAA
CACTATTCCTCTCTATCCTTGGGATCTTCGTTTGTCTATGCTAAAATCCA
GAATATATGAGGGCCTTTATTCAGCAGTCTCTCTCTATCAGAGTGCATCT
CAGTTGCTATCGAGTATCCGAGCTCTAGATGAAACATTAGAGCAATGGAG
GGTGTCCCTTCCCTCGGATTTTCGGCCCACGCTGTATTTTTCTGACGACA
CACACATCAGTGCCAATGTGAATACCCAGGCGGTGATGCTCAGGTTAGCA
TACTATCACTGCGTCACCTCAATCCACCAAGCAGCAAACCGCTATCGCAA
CTCAGCCTTGGACCCCGCAGGTACATGGCTGAGCGGCATAACTTCTAGCA
TTAATCTGTCTATCACTGCCAGTCGGTCAACGCTGTCTTATCTCAAGAGA
GTGCTGCCCATTATAAAGGGGAAATGTTTCTGGATCATACTATTCTACGC
TATCACCGCAGTGTTGACTCTCTTTTGCGATACCATCTCTGACCCGCATG
GCCCTGATGTACATCACAATGTCGAGCTATTGCAAGATGTTCCTGGGTTA
ATCCATCGCGTCCCTGTCCGACACCTAGCACTTGGGGAACTCACTCACCT
GCAGTATTTGAACGGATTTACTACGGAGCTTGCTGCCATTTGTGTGCGCG
CCACATCGAAGGCGCGAAGGGGATAGATGGCTACAGTTCCACAACTGATC
ACTCGCCAGGTTCAACTCCAATACTTCTTGGGTGACCTGCGCTCTGCAGG
TGTTACTCTGTCAATAGCCACACGGCTTCTATATGCACTGGGTGCTCATA
TATTACCCACTAAGGCCACCCCCTCTCGCGCCCCTGTCTATGATAAGAGC
GACATCAGATGCCACCTGCGAGATCTATTCTGGCTCTGCTATTCATTCGA
CAAGGATATATGCATCAGGACAGGCCAACCACCATCTTTAAACGACACGC
ACTGCGACTTGAGTCTGCCCGATGATTATGTGCAGCTGCAAAACATCAAC
CTCCAGCACGACATGCCTCCTGTCAATGACAACACTATTCCTCTCTATCC
TTGGGATCTTCGTTTGTCTATGCTAAAATCCAGAATATATGAGGGCCTTT
ATTCAGCAGTCTCTCTCTATCAGAGTGCATCTCAGTTGCTATCGAGTATC
CGAGCTCTAGATGAAACATTAGAGCAATGGAGGGTGTCCCTTCCCTCGGA
TTTTCGGCCCACGCTGTATTTTTCTGACGACACACACATCAGTGCCAATG
TGAATACCCAGGCGGTGATGCTCAGGTTAGCATACTATCACTGCGTCACC
TCAATCCACCAAGCAGCAAACCGCTATCGCAACTCAGCCTTGGACCCCGC
AGGTACATGGCTGAGCGGCATAACTTCTAGCATTAATCTGTCTATCACTG
CCAGTCGGTCAACGCTGTCTTATCTCAAGAGAGTGCTGCCCATTATAAAG
GGGAAATGTTTCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001315CBS51388_001315Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001315-T1CBS51388_001315-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001315-T1.cdsCBS51388_001315-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001315-T1.exon2CBS51388_001315-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001315-T1.exon1CBS51388_001315-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:224059..225148 -
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