You are here

Home

CBS51388_001378-T1, CBS51388_001378-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001378-T1
Unique NameCBS51388_001378-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:405180..406062-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001378-T1 ID=CBS51388_001378-T1|Name=CBS51388_001378-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=883bp|location=Sequence derived from alignment at An02:405180..406062- (Aspergillus niger CBS 513.88)
ATGTTTCAGAGAACCTTCCTCAGACAGGCCCAGCGGTCTCTCCGCTCTGT
GCGCCCTACCTCCATCAACACCTCCGCCTTCCGTCGCACGCCGCAGCTCC
CCCAGTCTGTCCGCGCGATTGCTCCTCAGTCTGCCTACCGGTTTTACTCT
ACCGAGAACAAGGCTGAGAACGGCGAGAAGAAGGAAGGTGAAGCTGCCCA
GGAGGCTGAGGACCCTGTCCGCAAGGAGCTTGAAGAGAAGAAGAAGGAGG
TCGTTGAGCTGAAGGTAAACCTTCCCATCTCAACAGGAGCGCCCGGCTCA
ACATTTACTACGCCAACCACGGTGGTAAATGGTACCTTGCAGATTGTCTA
ACTCTTTGAATAGGATAAGCTCCTTCGCTCGAAGGCCGACTTCCTCAACC
TGCAGGAGCGCACCAAGCGTGACATGGAGAACTCTCGTAACTTCGCTATT
CAGCGCTTTGCTGGCGACCTTCTCGAGTCCATTGACAACTTCGACCGTGC
CCTCCTTGCTGTGCCCAAGGACAAGCTTGATGCTCCTCAGACTGAGGAAA
ACAAGGACCTGTTGGAGCTCGTCTCCGGTCTGAAGATGACTCAGAACGTC
CTTCTGAACACCTTGAAGAAGCACGGTCTTGAGCGCTTTGACCCTAGCGA
GCCCACTGAGGAGGGCAAGACCCAGAAGTTCGACCCCAACCTTCACGAGG
CCACCTTCATGGCCAAGGTTGAGGGCAAGGAAGATGGTGACATCATGTAC
ACCCAGAGCACCGGTTTCCGCCTTAACGGCCGCGTTCTTCGCGTAAGTGA
TTGATATAATGACCTGTATACGTCGTAAAACATGCTAACTCATCTTTCTA
TAGGCTGCCAAGGTCGGTGTCGTTAAGAACTAG
back to top

Coding sequence (CDS) from alignment at An02:405180..406062-

>CBS51388_001378-T1 ID=CBS51388_001378-T1|Name=CBS51388_001378-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2169bp|location=Sequence derived from alignment at An02:405180..406062- (Aspergillus niger CBS 513.88)
GCTGCCAAGGTCGGTGTCGTTAAGAACTAGGATAAGCTCCTTCGCTCGAA
GGCCGACTTCCTCAACCTGCAGGAGCGCACCAAGCGTGACATGGAGAACT
CTCGTAACTTCGCTATTCAGCGCTTTGCTGGCGACCTTCTCGAGTCCATT
GACAACTTCGACCGTGCCCTCCTTGCTGTGCCCAAGGACAAGCTTGATGC
TCCTCAGACTGAGGAAAACAAGGACCTGTTGGAGCTCGTCTCCGGTCTGA
AGATGACTCAGAACGTCCTTCTGAACACCTTGAAGAAGCACGGTCTTGAG
CGCTTTGACCCTAGCGAGCCCACTGAGGAGGGCAAGACCCAGAAGTTCGA
CCCCAACCTTCACGAGGCCACCTTCATGGCCAAGGTTGAGGGCAAGGAAG
ATGGTGACATCATGTACACCCAGAGCACCGGTTTCCGCCTTAACGGCCGC
GTTCTTCGCATGTTTCAGAGAACCTTCCTCAGACAGGCCCAGCGGTCTCT
CCGCTCTGTGCGCCCTACCTCCATCAACACCTCCGCCTTCCGTCGCACGC
CGCAGCTCCCCCAGTCTGTCCGCGCGATTGCTCCTCAGTCTGCCTACCGG
TTTTACTCTACCGAGAACAAGGCTGAGAACGGCGAGAAGAAGGAAGGTGA
AGCTGCCCAGGAGGCTGAGGACCCTGTCCGCAAGGAGCTTGAAGAGAAGA
AGAAGGAGGTCGTTGAGCTGAAGGCTGCCAAGGTCGGTGTCGTTAAGAAC
TAGGATAAGCTCCTTCGCTCGAAGGCCGACTTCCTCAACCTGCAGGAGCG
CACCAAGCGTGACATGGAGAACTCTCGTAACTTCGCTATTCAGCGCTTTG
CTGGCGACCTTCTCGAGTCCATTGACAACTTCGACCGTGCCCTCCTTGCT
GTGCCCAAGGACAAGCTTGATGCTCCTCAGACTGAGGAAAACAAGGACCT
GTTGGAGCTCGTCTCCGGTCTGAAGATGACTCAGAACGTCCTTCTGAACA
CCTTGAAGAAGCACGGTCTTGAGCGCTTTGACCCTAGCGAGCCCACTGAG
GAGGGCAAGACCCAGAAGTTCGACCCCAACCTTCACGAGGCCACCTTCAT
GGCCAAGGTTGAGGGCAAGGAAGATGGTGACATCATGTACACCCAGAGCA
CCGGTTTCCGCCTTAACGGCCGCGTTCTTCGCATGTTTCAGAGAACCTTC
CTCAGACAGGCCCAGCGGTCTCTCCGCTCTGTGCGCCCTACCTCCATCAA
CACCTCCGCCTTCCGTCGCACGCCGCAGCTCCCCCAGTCTGTCCGCGCGA
TTGCTCCTCAGTCTGCCTACCGGTTTTACTCTACCGAGAACAAGGCTGAG
AACGGCGAGAAGAAGGAAGGTGAAGCTGCCCAGGAGGCTGAGGACCCTGT
CCGCAAGGAGCTTGAAGAGAAGAAGAAGGAGGTCGTTGAGCTGAAGGCTG
CCAAGGTCGGTGTCGTTAAGAACTAGGATAAGCTCCTTCGCTCGAAGGCC
GACTTCCTCAACCTGCAGGAGCGCACCAAGCGTGACATGGAGAACTCTCG
TAACTTCGCTATTCAGCGCTTTGCTGGCGACCTTCTCGAGTCCATTGACA
ACTTCGACCGTGCCCTCCTTGCTGTGCCCAAGGACAAGCTTGATGCTCCT
CAGACTGAGGAAAACAAGGACCTGTTGGAGCTCGTCTCCGGTCTGAAGAT
GACTCAGAACGTCCTTCTGAACACCTTGAAGAAGCACGGTCTTGAGCGCT
TTGACCCTAGCGAGCCCACTGAGGAGGGCAAGACCCAGAAGTTCGACCCC
AACCTTCACGAGGCCACCTTCATGGCCAAGGTTGAGGGCAAGGAAGATGG
TGACATCATGTACACCCAGAGCACCGGTTTCCGCCTTAACGGCCGCGTTC
TTCGCATGTTTCAGAGAACCTTCCTCAGACAGGCCCAGCGGTCTCTCCGC
TCTGTGCGCCCTACCTCCATCAACACCTCCGCCTTCCGTCGCACGCCGCA
GCTCCCCCAGTCTGTCCGCGCGATTGCTCCTCAGTCTGCCTACCGGTTTT
ACTCTACCGAGAACAAGGCTGAGAACGGCGAGAAGAAGGAAGGTGAAGCT
GCCCAGGAGGCTGAGGACCCTGTCCGCAAGGAGCTTGAAGAGAAGAAGAA
GGAGGTCGTTGAGCTGAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: Molecular Function
TermDefinition
GO:0051087chaperone binding
GO:0000774adenyl-nucleotide exchange factor activity
GO:0042803protein homodimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001378CBS51388_001378Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001378-T1CBS51388_001378-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001378-T1.cdsCBS51388_001378-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001378-T1.exon3CBS51388_001378-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_001378-T1.exon2CBS51388_001378-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001378-T1.exon1CBS51388_001378-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09264IDN
DBxrefInterPro:IPR009012
DBxrefInterPro:IPR013805
DBxrefInterPro:IPR000740
DBxrefPFAM:PF01025
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:405180..406062 -
Powered by Drupal