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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:633926..635263+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001442-T1 ID=CBS51388_001442-T1|Name=CBS51388_001442-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1338bp|location=Sequence derived from alignment at An02:633926..635263+ (Aspergillus niger CBS 513.88)
ATGGCATCTGTTCCTGCAGCGTCTGTCTTTTCTTTGCCCCTAGCCCCATG
GCAACAACCTTCTAGTGTGCGCGTGGCTCAGTACGAGCCTAGGAAGCGCA
AGAAGGATCTCAACGACTGGGGGGACGATGATGACGATGTTGATGGCGAC
ACAACAGATGCGGCATCAGAGGCAGCTGCTTCTGGTCCGTCCCTCATCCT
CTCCCCGGATGAAGCCCACCAATATCGCATTGCTGGCCTTTCCTTTGACC
AAGAACTGCCCGGGGGCAATTTCCCACATGCCCCGGTTAAAGATCAACCG
ACCCGTCGGCAGACACGAAATCAGGTCCTGAAAGAATTGACGTCATTGTC
GTCTCCCATTTATCCTCCCCAGTCTGCAGCTCATCAAGGGAATCTTCGTC
TTCAGCATCTGGCTGTGCTATCCTCCATCTTGCACCGTTGCCTACTTCAG
AAAGACTTCGTTCGAGCGGGCAGGGCCTGGGGGTTAATCCTCCGTGAAGA
AGTTGGGGGCACCCCAATCGACGTTCGCACTGAAGGGAGATGGGGCATTG
GCGCAGAAATCCTGCTCCGACGTGACTGTCAGGTCTCGGACATGACTCCT
GATAATGCGCAGGAAAGTGAGGCAGAGCCGTCTGAGGCACCGTTTTCCAA
ATTATTATTCACAAGGCAGGGGTTTGAAAAGGCCAAACAGTATTACGAGA
CGCTCATCATTCAGCATCCATACCGAAAAGCTGCACCTGACGCTATAAGC
TCTCTACACTTCTATCCTGCCATGTTTGGACTATGGGTGTATGTCACCCA
AGAGGAGAGCAACGTTTCTCGACAAAAATTATGGGACGCCCATGGTGCTT
CCCCTGATGACTCGGAAGAAGAAGATTCTGCGCCCGATATGCAACACCAT
TCTAGCTCACGACAGAATACGCATGCGATGGTTGCCAGTGTTAGGAAGAG
TGAACTGGAACAGGCCCAGAAGATCGCAGCTAGGATGGATGAGATTCTCG
GATCCCCTCCGTACTCCGACTCCCCGGAGTTGCTGGAGCTCCGCGGAATG
ATATCTCTCTGGATCGCTGATCTCTTCGTCTCATCACTGCCATATGCGCG
GACAGAGGGAGATCTGGATGGTTACGATTCGGATGAGACCGGTTCGTCAT
CCGCGGAAGATCTCCAAGACTCACTTCAAGAGCGGCGAGAACGCCGTCTT
GCAGTTGAGAGGAAGGAATATGAGGTCCAAAAATCGCAGGATTACTTTGA
AAAAGCCAAACATCGTGGCAAGGGAGTCACCTCTACGTTTGGAGACCTGC
ATATAGATGATGATGCTTCATTTGGGTATGCGGATTAA back to topCoding sequence (CDS) from alignment at An02:633926..635263+ >CBS51388_001442-T1 ID=CBS51388_001442-T1|Name=CBS51388_001442-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1338bp|location=Sequence derived from alignment at An02:633926..635263+ (Aspergillus niger CBS 513.88)
ATGGCATCTGTTCCTGCAGCGTCTGTCTTTTCTTTGCCCCTAGCCCCATG
GCAACAACCTTCTAGTGTGCGCGTGGCTCAGTACGAGCCTAGGAAGCGCA
AGAAGGATCTCAACGACTGGGGGGACGATGATGACGATGTTGATGGCGAC
ACAACAGATGCGGCATCAGAGGCAGCTGCTTCTGGTCCGTCCCTCATCCT
CTCCCCGGATGAAGCCCACCAATATCGCATTGCTGGCCTTTCCTTTGACC
AAGAACTGCCCGGGGGCAATTTCCCACATGCCCCGGTTAAAGATCAACCG
ACCCGTCGGCAGACACGAAATCAGGTCCTGAAAGAATTGACGTCATTGTC
GTCTCCCATTTATCCTCCCCAGTCTGCAGCTCATCAAGGGAATCTTCGTC
TTCAGCATCTGGCTGTGCTATCCTCCATCTTGCACCGTTGCCTACTTCAG
AAAGACTTCGTTCGAGCGGGCAGGGCCTGGGGGTTAATCCTCCGTGAAGA
AGTTGGGGGCACCCCAATCGACGTTCGCACTGAAGGGAGATGGGGCATTG
GCGCAGAAATCCTGCTCCGACGTGACTGTCAGGTCTCGGACATGACTCCT
GATAATGCGCAGGAAAGTGAGGCAGAGCCGTCTGAGGCACCGTTTTCCAA
ATTATTATTCACAAGGCAGGGGTTTGAAAAGGCCAAACAGTATTACGAGA
CGCTCATCATTCAGCATCCATACCGAAAAGCTGCACCTGACGCTATAAGC
TCTCTACACTTCTATCCTGCCATGTTTGGACTATGGGTGTATGTCACCCA
AGAGGAGAGCAACGTTTCTCGACAAAAATTATGGGACGCCCATGGTGCTT
CCCCTGATGACTCGGAAGAAGAAGATTCTGCGCCCGATATGCAACACCAT
TCTAGCTCACGACAGAATACGCATGCGATGGTTGCCAGTGTTAGGAAGAG
TGAACTGGAACAGGCCCAGAAGATCGCAGCTAGGATGGATGAGATTCTCG
GATCCCCTCCGTACTCCGACTCCCCGGAGTTGCTGGAGCTCCGCGGAATG
ATATCTCTCTGGATCGCTGATCTCTTCGTCTCATCACTGCCATATGCGCG
GACAGAGGGAGATCTGGATGGTTACGATTCGGATGAGACCGGTTCGTCAT
CCGCGGAAGATCTCCAAGACTCACTTCAAGAGCGGCGAGAACGCCGTCTT
GCAGTTGAGAGGAAGGAATATGAGGTCCAAAAATCGCAGGATTACTTTGA
AAAAGCCAAACATCGTGGCAAGGGAGTCACCTCTACGTTTGGAGACCTGC
ATATAGATGATGATGCTTCATTTGGGTATGCGGATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0001181 | RNA polymerase I general transcription initiation factor activity |
| GO:0001164 | RNA polymerase I core promoter sequence-specific DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006361 | transcription initiation from RNA polymerase I promoter |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007224 |
| DBxref | PFAM:PF04090 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:633926..635263 + |
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