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CBS51388_001578-T1, CBS51388_001578-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001578-T1
Unique NameCBS51388_001578-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:1040377..1041214+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001578-T1 ID=CBS51388_001578-T1|Name=CBS51388_001578-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=838bp|location=Sequence derived from alignment at An02:1040377..1041214+ (Aspergillus niger CBS 513.88)
ATGGGTCCGCAGCTGAAGATGTTCTCGGGGCCTCAGATGGCCTTCCTCCG
GCCGTCGTGTGAGATTCCCGCAAGCCTCCCCAAGAAAAGTTTTTTATATC
CTGACTTCGATGCCGTACAGTAGGTCTGTCGACGCCATTCACGGCTTTCC
CTCTATCGCGATGCTTCTCGACGACTTCGCCTGCCCTCGATTGGCTTACC
CCTAAGTTCGCCGAGAGATCCAAGTCCCCTAAGGGTCGTCCGCATGTCGC
AACTGGTGGTTCTTCCCGCGGTACTACCGTCGTCTGGGGTGATTATGGCT
TGCGGATGAAGGACCACGACCGTCGGTTGCCCGCTGCCTCGTTGAAAATT
GCGGAGGATACGATTAAGAGACGTCTGAGGGGTATGAACTACACATTGTA
CAAGCGCGTGAGCGCAAACATCGGTGTCTACACCAAGGGCAACGAACAAC
GTATGGGTAAGGGTAAGGGAAAGTTCGACTACTGGACGGCGAAGGTTGGC
GTGAGCAGAATTGTCTTTGAGCTCAAGGGTGATCTGCACGAAAAGGTCGC
CAGGGAGGCCTTCCGTCTGGCCGGCCACAAGCTGCCCGGTACGTTACATC
CACCTGATGATATTCTCCAATTATCAACATACGGTAAACTAATTATACAA
CGGCTGCAGGCCTCTGGGAATTCGTGAAGAAGGGTGACCCGCCGGTCGTT
GGACTGACGAAACTTGGCAACGGAGTGACTCTGGAGAGCCTCAAACGCGC
ACGCAGAAGCCCGGCCCTCGGTACTCAGGACCTACCGAACCCCCCGACCT
CGACCTCGTCCTCCTCCAGTCCCTCTGCTCCCCAATAA
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Coding sequence (CDS) from alignment at An02:1040377..1041214+

>CBS51388_001578-T1 ID=CBS51388_001578-T1|Name=CBS51388_001578-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2115bp|location=Sequence derived from alignment at An02:1040377..1041214+ (Aspergillus niger CBS 513.88)
ATGGGTCCGCAGCTGAAGATGTTCTCGGGGCCTCAGATGGCCTTCCTCCG
GCCGTCGTTAGGTCTGTCGACGCCATTCACGGCTTTCCCTCTATCGCGAT
GCTTCTCGACGACTTCGCCTGCCCTCGATTGGCTTACCCCTAAGTTCGCC
GAGAGATCCAAGTCCCCTAAGGGTCGTCCGCATGTCGCAACTGGTGGTTC
TTCCCGCGGTACTACCGTCGTCTGGGGTGATTATGGCTTGCGGATGAAGG
ACCACGACCGTCGGTTGCCCGCTGCCTCGTTGAAAATTGCGGAGGATACG
ATTAAGAGACGTCTGAGGGGTATGAACTACACATTGTACAAGCGCGTGAG
CGCAAACATCGGTGTCTACACCAAGGGCAACGAACAACGTATGGGTAAGG
GTAAGGGAAAGTTCGACTACTGGACGGCGAAGGTTGGCGTGAGCAGAATT
GTCTTTGAGCTCAAGGGTGATCTGCACGAAAAGGTCGCCAGGGAGGCCTT
CCGTCTGGCCGGCCACAAGCTGCCCGGCCTCTGGGAATTCGTGAAGAAGG
GTGACCCGCCGGTCGTTGGACTGACGAAACTTGGCAACGGAGTGACTCTG
GAGAGCCTCAAACGCGCACGCAGAAGCCCGGCCCTCGGTACTCAGGACCT
ACCGAACCCCCCGACCTCGACCTCGTCCTCCTCCAGTCCCTCTGCTCCCC
AATAAATGGGTCCGCAGCTGAAGATGTTCTCGGGGCCTCAGATGGCCTTC
CTCCGGCCGTCGTTAGGTCTGTCGACGCCATTCACGGCTTTCCCTCTATC
GCGATGCTTCTCGACGACTTCGCCTGCCCTCGATTGGCTTACCCCTAAGT
TCGCCGAGAGATCCAAGTCCCCTAAGGGTCGTCCGCATGTCGCAACTGGT
GGTTCTTCCCGCGGTACTACCGTCGTCTGGGGTGATTATGGCTTGCGGAT
GAAGGACCACGACCGTCGGTTGCCCGCTGCCTCGTTGAAAATTGCGGAGG
ATACGATTAAGAGACGTCTGAGGGGTATGAACTACACATTGTACAAGCGC
GTGAGCGCAAACATCGGTGTCTACACCAAGGGCAACGAACAACGTATGGG
TAAGGGTAAGGGAAAGTTCGACTACTGGACGGCGAAGGTTGGCGTGAGCA
GAATTGTCTTTGAGCTCAAGGGTGATCTGCACGAAAAGGTCGCCAGGGAG
GCCTTCCGTCTGGCCGGCCACAAGCTGCCCGGCCTCTGGGAATTCGTGAA
GAAGGGTGACCCGCCGGTCGTTGGACTGACGAAACTTGGCAACGGAGTGA
CTCTGGAGAGCCTCAAACGCGCACGCAGAAGCCCGGCCCTCGGTACTCAG
GACCTACCGAACCCCCCGACCTCGACCTCGTCCTCCTCCAGTCCCTCTGC
TCCCCAATAAATGGGTCCGCAGCTGAAGATGTTCTCGGGGCCTCAGATGG
CCTTCCTCCGGCCGTCGTTAGGTCTGTCGACGCCATTCACGGCTTTCCCT
CTATCGCGATGCTTCTCGACGACTTCGCCTGCCCTCGATTGGCTTACCCC
TAAGTTCGCCGAGAGATCCAAGTCCCCTAAGGGTCGTCCGCATGTCGCAA
CTGGTGGTTCTTCCCGCGGTACTACCGTCGTCTGGGGTGATTATGGCTTG
CGGATGAAGGACCACGACCGTCGGTTGCCCGCTGCCTCGTTGAAAATTGC
GGAGGATACGATTAAGAGACGTCTGAGGGGTATGAACTACACATTGTACA
AGCGCGTGAGCGCAAACATCGGTGTCTACACCAAGGGCAACGAACAACGT
ATGGGTAAGGGTAAGGGAAAGTTCGACTACTGGACGGCGAAGGTTGGCGT
GAGCAGAATTGTCTTTGAGCTCAAGGGTGATCTGCACGAAAAGGTCGCCA
GGGAGGCCTTCCGTCTGGCCGGCCACAAGCTGCCCGGCCTCTGGGAATTC
GTGAAGAAGGGTGACCCGCCGGTCGTTGGACTGACGAAACTTGGCAACGG
AGTGACTCTGGAGAGCCTCAAACGCGCACGCAGAAGCCCGGCCCTCGGTA
CTCAGGACCTACCGAACCCCCCGACCTCGACCTCGTCCTCCTCCAGTCCC
TCTGCTCCCCAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0019843rRNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001578CBS51388_001578Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001578-T1.exon1CBS51388_001578-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_001578-T1.exon2CBS51388_001578-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001578-T1.exon3CBS51388_001578-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001578-T1.cdsCBS51388_001578-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001578-T1CBS51388_001578-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264T3S
DBxrefInterPro:IPR020798
DBxrefInterPro:IPR036920
DBxrefInterPro:IPR016180
DBxrefInterPro:IPR000114
DBxrefPFAM:PF00252
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:1040377..1041214 +
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