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CBS51388_001645-T1, CBS51388_001645-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001645-T1
Unique NameCBS51388_001645-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:1227464..1228690-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001645-T1 ID=CBS51388_001645-T1|Name=CBS51388_001645-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1227bp|location=Sequence derived from alignment at An02:1227464..1228690- (Aspergillus niger CBS 513.88)
ATGATCCGAGCGCATCAACGTTTATCGCGTCCTGATGTGCTCGGTCATTT
CTCATCTCGCATCAACTCCATAGACTTCCGTCGCAGACCCGTCGCTCATA
TCACAATGGCTGAGACGACAAATGATACAGCTGCAACTGCAGCTGCAGCT
GCGGACCCCCAACCGCCGGTTGTCACATTCAAAAAGCGCGGCGCAAAGGC
GAGTCAGAACATCCGCAAAAGACCAGCACCGCCTCCCGTATCGCAAGACG
ACGATTCTTCCGACTTTTCCTCCTCTGAAGACGAATCGGGTCACAGAATA
AAGCGCAGAAAGAACAAGGGTGCTGGGGTTGTCTCTGCTTCATCTGCGAC
TACCAAGCCTGTCGATCGGGAACCTGCGGCCACCGCCACCGGGGATGGCA
AAGTCCAGCTTGCGGATACGAACGACGCCACAAAACACGTCGACTGGTTT
GACGAGGATTCTAAGGATGCGCGCTCATCGAAACCGCAATCTGCCTCGAA
TGAGCCGCAGATGCCGGATGGCACATATAGGGGACTGGCGAACCAGACGT
CATTCATCAAGAAGAATCCGAATGCGCCGAACAGGTCATTCGGACCGATC
AAGGCAGCGACCAATATCCGTACTATAACAGTGACGGACTACTCTCCAGA
TGTGTGCAAGGACTACAAGCAGACTGGATTCTGTGGTTTCGGTGATAATT
GGTGAGTGCCGTCGCCCCTTTCACCCGACATACACATTTGCCACTCAATA
GGGAGCAGCTTATCTAATTGAAGCATACGCTAACTATTATTGTACAGTAA
ATTCCTTCACGATCGAAGCGACTACAAACAAGGATGGGAACTGGATCGAG
AGTGGGAGACCGTCACCAAGGGCAAACAATTGAAGGGAACAGTGGTTGCG
AGTGCCGATCGGACAACGACGGAGAATAAAGACGACGATGAAGAGGCCAT
GCTGGAAGACATCCCGTTTGCCTGTTTTATCTGCAAGGGGCCATACAGGG
AGCCGATCGTCACGAAATGCGGTCACTACTTCTGCGAGCAGTGTGCTCTG
CAAAGATACAGGAAGGACCCAAGCTGCGCAGCCTGTGGATCCGCCACGAA
TGGATTATTCAGTTCGGCCAAGAGATTGAAAAAGCTGCTAGAGCGCAAGA
GGGAACTTGCGGCGAAGAGGAGACAAGAGGCTATCGAAGCTGGTGAGGAA
GTGAGTGACGAGGAAGACGAAGAATGA
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Coding sequence (CDS) from alignment at An02:1227464..1228690-

>CBS51388_001645-T1 ID=CBS51388_001645-T1|Name=CBS51388_001645-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2262bp|location=Sequence derived from alignment at An02:1227464..1228690- (Aspergillus niger CBS 513.88)
TAAATTCCTTCACGATCGAAGCGACTACAAACAAGGATGGGAACTGGATC
GAGAGTGGGAGACCGTCACCAAGGGCAAACAATTGAAGGGAACAGTGGTT
GCGAGTGCCGATCGGACAACGACGGAGAATAAAGACGACGATGAAGAGGC
CATGCTGGAAGACATCCCGTTTGCCTGTTTTATCTGCAAGGGGCCATACA
GGGAGCCGATCGTCACGAAATGCGGTCACTACTTCTGCGAGCAGTGTGCT
CTGCAAAGATACAGGAAGGACCCAAGCTGCGCAGCCTGTGGATCCGCCAC
GAATGGATTATTCAGTTCGGCCAAGAGATTGAAAAAGCTGCTAGAGCGCA
AGAGGGAACTTGCGGCGAAGAGGAGACAAGAGGCTATCGAAGCTGGTGAG
GAAGTGAGTGACGAGGAAGACGAAGAATGAATGATCCGAGCGCATCAACG
TTTATCGCGTCCTGATGTGCTCGGTCATTTCTCATCTCGCATCAACTCCA
TAGACTTCCGTCGCAGACCCGTCGCTCATATCACAATGGCTGAGACGACA
AATGATACAGCTGCAACTGCAGCTGCAGCTGCGGACCCCCAACCGCCGGT
TGTCACATTCAAAAAGCGCGGCGCAAAGGCGAGTCAGAACATCCGCAAAA
GACCAGCACCGCCTCCCGTATCGCAAGACGACGATTCTTCCGACTTTTCC
TCCTCTGAAGACGAATCGGGTCACAGAATAAAGCGCAGAAAGAACAAGGG
TGCTGGGGTTGTCTCTGCTTCATCTGCGACTACCAAGCCTGTCGATCGGG
AACCTGCGGCCACCGCCACCGGGGATGGCAAAGTCCAGCTTGCGGATACG
AACGACGCCACAAAACACGTCGACTGGTTTGACGAGGATTCTAAGGATGC
GCGCTCATCGAAACCGCAATCTGCCTCGAATGAGCCGCAGATGCCGGATG
GCACATATAGGGGACTGGCGAACCAGACGTCATTCATCAAGAAGAATCCG
AATGCGCCGAACAGGTCATTCGGACCGATCAAGGCAGCGACCAATATCCG
TACTATAACAGTGACGGACTACTCTCCAGATGTGTGCAAGGACTACAAGC
AGACTGGATTCTGTGGTTTCGGTGATAATTGTAAATTCCTTCACGATCGA
AGCGACTACAAACAAGGATGGGAACTGGATCGAGAGTGGGAGACCGTCAC
CAAGGGCAAACAATTGAAGGGAACAGTGGTTGCGAGTGCCGATCGGACAA
CGACGGAGAATAAAGACGACGATGAAGAGGCCATGCTGGAAGACATCCCG
TTTGCCTGTTTTATCTGCAAGGGGCCATACAGGGAGCCGATCGTCACGAA
ATGCGGTCACTACTTCTGCGAGCAGTGTGCTCTGCAAAGATACAGGAAGG
ACCCAAGCTGCGCAGCCTGTGGATCCGCCACGAATGGATTATTCAGTTCG
GCCAAGAGATTGAAAAAGCTGCTAGAGCGCAAGAGGGAACTTGCGGCGAA
GAGGAGACAAGAGGCTATCGAAGCTGGTGAGGAAGTGAGTGACGAGGAAG
ACGAAGAATGAATGATCCGAGCGCATCAACGTTTATCGCGTCCTGATGTG
CTCGGTCATTTCTCATCTCGCATCAACTCCATAGACTTCCGTCGCAGACC
CGTCGCTCATATCACAATGGCTGAGACGACAAATGATACAGCTGCAACTG
CAGCTGCAGCTGCGGACCCCCAACCGCCGGTTGTCACATTCAAAAAGCGC
GGCGCAAAGGCGAGTCAGAACATCCGCAAAAGACCAGCACCGCCTCCCGT
ATCGCAAGACGACGATTCTTCCGACTTTTCCTCCTCTGAAGACGAATCGG
GTCACAGAATAAAGCGCAGAAAGAACAAGGGTGCTGGGGTTGTCTCTGCT
TCATCTGCGACTACCAAGCCTGTCGATCGGGAACCTGCGGCCACCGCCAC
CGGGGATGGCAAAGTCCAGCTTGCGGATACGAACGACGCCACAAAACACG
TCGACTGGTTTGACGAGGATTCTAAGGATGCGCGCTCATCGAAACCGCAA
TCTGCCTCGAATGAGCCGCAGATGCCGGATGGCACATATAGGGGACTGGC
GAACCAGACGTCATTCATCAAGAAGAATCCGAATGCGCCGAACAGGTCAT
TCGGACCGATCAAGGCAGCGACCAATATCCGTACTATAACAGTGACGGAC
TACTCTCCAGATGTGTGCAAGGACTACAAGCAGACTGGATTCTGTGGTTT
CGGTGATAATTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CWC24CBS51388_001645Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001645-T1CBS51388_001645-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001645-T1.cdsCBS51388_001645-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001645-T1.exon2CBS51388_001645-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001645-T1.exon1CBS51388_001645-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036855
DBxrefInterPro:IPR017907
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR001841
DBxrefInterPro:IPR000571
DBxrefPFAM:PF13445
DBxrefPFAM:PF00642
DBxrefPFAM:PF13920
DBxrefPFAM:PF13923
DBxrefPFAM:PF00097
ProductRNA-splicing factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:1227464..1228690 -
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