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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:1239103..1241217- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001651-T1 ID=CBS51388_001651-T1|Name=CBS51388_001651-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2115bp|location=Sequence derived from alignment at An02:1239103..1241217- (Aspergillus niger CBS 513.88)
ATGCCATACACTGCGCCGTTGAAGACGTCGCCTTCTGCGCAGCACATTGA
ACACTCTGAACTCACTCCACAATCCTGTCCTAGCTCCCCCACCGCTGTCG
TCTCTCATCCTCAACGCCAGCATTTGCCTCGTTCGTATTCTTCCACCTCT
TATGTGCGAAGGCACCGACGAAGCCCTTCGAGTAGCAAGGTGTTTGTCTT
TCCAGAGCCCGAAGGTCGTTTCAAAGTGGATCATGTCAGCGACCCGCATG
CCAGTATTCGAACGTCGCCACCTCCCATAAGTGATGCTGTCATCCCTCCT
GGGGCTTTGATCTCACCACCTGAATCTGCCAACAATTCAAGTGATGAAGA
GGCGGCGTACCCATCCCAGGACGGGCTCCAGCTGAAGAGATTGGAGGCTG
CAGTGAGGTCCATTGAACAGAGACGAGTATCGTCACCGGAGAGGCAGTCG
TCGGAGGTTCAGCCCTCATCGAGCATGGCAGCCATTGCTGGTGGCCCAGT
CCAACCTCCACGACCCCCCCTCTCCAGAGAGGCTCGCAAAATATCCCACT
CTCGATCGGTTACAGAAACCTCAATTGACCGTAGGCAGGAGGAGGCTTTG
ACTAGCTCTCCAGAAGAAAGTGACAGAGATGATGAGCCCCCGGTCAGGCA
TCCCATGGTCCGCAAGAAGTCTGGGGAACTGGTGAGGCCAGCCCTTCGCC
CACCTTCGGCTCGGCGGCGCCCATCTAGCATGCCGGGGACTCCAACTTAC
GCAAAGGCTGTTCACTTCGACGCTCAGCTGGAACATATTCGTCATTTTCT
ACAATTGGATAAGCCTCAAGCCGTGAGTGCCGACACATCACCAGTGGAGG
ACTTTGACACAGCAGAGGAATTTCCGTTCAAGAAGGGTCATCGGGACATG
CCCGCTTTTGAGTGGGAGCTGGGTCTGTCGAACTTCCCCAAAGACAGCTC
CTCTCGGGCTAAGCAACGCGTTCGATTGGAACGCCTGCACTTGTCTTCAG
ATAAAAACACCATGATCGGAGTCGTTGGGGTCGCCAACCTGGCTTTCCAC
AAGCACGTTGCCGCTCGGTTCACTCTTGATAATTGGAAGACTGTTTCTGA
AGTCTCCGCTGAGTACAATGACGACCCTCGACGAAAGCCTATTCTGGATG
GCTATGATAGGTTTGCTTTTAGTATCCGGCTGGATGATCAGGCAAATTTG
GAGAGGAAAACCATGTTTATCTGCATTCGCTACAATGTTGCTGGAGAGGA
GTATTGGGACAACAACAACTCAGAAAACTACCAAGTCAATTTTCGCAGAG
TACCAAAAGAAATGCCCCAGGCCCAGGCTCCACCCACGCGTCCTCGTACA
AATTTGCCGAGGAGCAGGAGCTTTGCTGGATCTATCAGCCGCCCACACTC
AATGCCGCCTTCATTTGATGCGTTGTCTGAGATGGACAAGTACATTTCGT
TTGGCAACCCACCAACAAATGGCAAGAAGGAGCATTTGGCTGATGATGAT
CCGCATGACGTTGAATTGGTTGCTCCGATCCGTCGCGATAAGCAAAACCA
CCAGGTGTTTGGGAATCGCTACGATTTCGAAGCCTCATTGACGGCAGCTA
TGCGGACCAAGCCTACTCACGATCGCACGACATTGACAGCTCGAGCAAAG
TCGAAACTTCCGTCGCATGGTAGTCATAGCCATTCGTCGGAACGGAGAAC
AAGCCAGAGGGAGGAGAACGCGCCTTTGCCTAGCAGAGGTAGCCAGCAGC
CGGGGTCCCCAGACCACCATAAACCCTCTACCATCGTTTCTGGCAAGCCG
CATCGCGAGTCGTCGGTGTACAAAGAGTTGGTTGATAAATACTGCTTCTT
CGGATCCGGATCGATGAATTACCCAAATGGTGCAGTTGGTCCTGTCACGG
CAAGTCCGGACTATGAGACCCGGTCGGGCTCTAGTAGCAGTTCCAGCTCG
GTGTCTCCATGCTCATCTCCTCGGATGGATGCGGTTTATGGTGGCGATTC
TCGACACTCTCCTGCCGCCCCATCGTCACCGAACCATATCGGATATGGAT
ACCTTCAGCCTATGCAGAACAGTTTTATGAAGGATACGCAGACACCTGCT
ATCATCCAAGGATGA back to topCoding sequence (CDS) from alignment at An02:1239103..1241217- >CBS51388_001651-T1 ID=CBS51388_001651-T1|Name=CBS51388_001651-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2115bp|location=Sequence derived from alignment at An02:1239103..1241217- (Aspergillus niger CBS 513.88)
ATGCCATACACTGCGCCGTTGAAGACGTCGCCTTCTGCGCAGCACATTGA
ACACTCTGAACTCACTCCACAATCCTGTCCTAGCTCCCCCACCGCTGTCG
TCTCTCATCCTCAACGCCAGCATTTGCCTCGTTCGTATTCTTCCACCTCT
TATGTGCGAAGGCACCGACGAAGCCCTTCGAGTAGCAAGGTGTTTGTCTT
TCCAGAGCCCGAAGGTCGTTTCAAAGTGGATCATGTCAGCGACCCGCATG
CCAGTATTCGAACGTCGCCACCTCCCATAAGTGATGCTGTCATCCCTCCT
GGGGCTTTGATCTCACCACCTGAATCTGCCAACAATTCAAGTGATGAAGA
GGCGGCGTACCCATCCCAGGACGGGCTCCAGCTGAAGAGATTGGAGGCTG
CAGTGAGGTCCATTGAACAGAGACGAGTATCGTCACCGGAGAGGCAGTCG
TCGGAGGTTCAGCCCTCATCGAGCATGGCAGCCATTGCTGGTGGCCCAGT
CCAACCTCCACGACCCCCCCTCTCCAGAGAGGCTCGCAAAATATCCCACT
CTCGATCGGTTACAGAAACCTCAATTGACCGTAGGCAGGAGGAGGCTTTG
ACTAGCTCTCCAGAAGAAAGTGACAGAGATGATGAGCCCCCGGTCAGGCA
TCCCATGGTCCGCAAGAAGTCTGGGGAACTGGTGAGGCCAGCCCTTCGCC
CACCTTCGGCTCGGCGGCGCCCATCTAGCATGCCGGGGACTCCAACTTAC
GCAAAGGCTGTTCACTTCGACGCTCAGCTGGAACATATTCGTCATTTTCT
ACAATTGGATAAGCCTCAAGCCGTGAGTGCCGACACATCACCAGTGGAGG
ACTTTGACACAGCAGAGGAATTTCCGTTCAAGAAGGGTCATCGGGACATG
CCCGCTTTTGAGTGGGAGCTGGGTCTGTCGAACTTCCCCAAAGACAGCTC
CTCTCGGGCTAAGCAACGCGTTCGATTGGAACGCCTGCACTTGTCTTCAG
ATAAAAACACCATGATCGGAGTCGTTGGGGTCGCCAACCTGGCTTTCCAC
AAGCACGTTGCCGCTCGGTTCACTCTTGATAATTGGAAGACTGTTTCTGA
AGTCTCCGCTGAGTACAATGACGACCCTCGACGAAAGCCTATTCTGGATG
GCTATGATAGGTTTGCTTTTAGTATCCGGCTGGATGATCAGGCAAATTTG
GAGAGGAAAACCATGTTTATCTGCATTCGCTACAATGTTGCTGGAGAGGA
GTATTGGGACAACAACAACTCAGAAAACTACCAAGTCAATTTTCGCAGAG
TACCAAAAGAAATGCCCCAGGCCCAGGCTCCACCCACGCGTCCTCGTACA
AATTTGCCGAGGAGCAGGAGCTTTGCTGGATCTATCAGCCGCCCACACTC
AATGCCGCCTTCATTTGATGCGTTGTCTGAGATGGACAAGTACATTTCGT
TTGGCAACCCACCAACAAATGGCAAGAAGGAGCATTTGGCTGATGATGAT
CCGCATGACGTTGAATTGGTTGCTCCGATCCGTCGCGATAAGCAAAACCA
CCAGGTGTTTGGGAATCGCTACGATTTCGAAGCCTCATTGACGGCAGCTA
TGCGGACCAAGCCTACTCACGATCGCACGACATTGACAGCTCGAGCAAAG
TCGAAACTTCCGTCGCATGGTAGTCATAGCCATTCGTCGGAACGGAGAAC
AAGCCAGAGGGAGGAGAACGCGCCTTTGCCTAGCAGAGGTAGCCAGCAGC
CGGGGTCCCCAGACCACCATAAACCCTCTACCATCGTTTCTGGCAAGCCG
CATCGCGAGTCGTCGGTGTACAAAGAGTTGGTTGATAAATACTGCTTCTT
CGGATCCGGATCGATGAATTACCCAAATGGTGCAGTTGGTCCTGTCACGG
CAAGTCCGGACTATGAGACCCGGTCGGGCTCTAGTAGCAGTTCCAGCTCG
GTGTCTCCATGCTCATCTCCTCGGATGGATGCGGTTTATGGTGGCGATTC
TCGACACTCTCCTGCCGCCCCATCGTCACCGAACCATATCGGATATGGAT
ACCTTCAGCCTATGCAGAACAGTTTTATGAAGGATACGCAGACACCTGCT
ATCATCCAAGGATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:CBM21 |
| DBxref | InterPro:IPR038175 |
| DBxref | InterPro:IPR005036 |
| DBxref | PFAM:PF03370 |
| DBxref | PFAM:PF16760 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:1239103..1241217 - |
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