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CBS51388_002022-T1, CBS51388_002022-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002022-T1
Unique NameCBS51388_002022-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:2461779..2463571+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002022-T1 ID=CBS51388_002022-T1|Name=CBS51388_002022-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1793bp|location=Sequence derived from alignment at An02:2461779..2463571+ (Aspergillus niger CBS 513.88)
ATGACGACCGCTCAAGATATGGAGGAAATATACCGCTCCAACTATCCAAG
CAACCATGTCTCCCGAGTCCTTACAGCCGATCCTACTCAAGGTCAGGTTG
ATCCTTTGGATCTTCCTTACCGTCAGGTGACCGAGAACGCCAACATGGAG
GAATACACGACGGAAACCACCACAGGAGAGATCATCAAGCCAGTCCGGTC
CGCTGCTACAGGGAAAACAGAAGACTGGAAGCTGGTAACCTTCAGTATCG
ACGATCCCGAAAATCCGAAGAATTGGTCCAAAGCCTTCAAATGGTATTGT
ACCATGGTGGTTTCGTTCACATGCTTTGTCGTCGCTTTTGCTAGTAGCGT
CATCACAGCCGATATTGAAGGCCCTGCAGAACAGTTCGGCGTTTCTCGAG
AAGTTAGCCCTTGTTGTTGTTACTGTTTTGTCATCGGCTTTGGTGTTGGT
AAGTCATCTTAGTAATTTTGCTTCGATATGGTCACTGACTGCGCTCAGGT
CCCATGGCTTTTGCTCCCCTGTCTGAAATGGTGGGCCGGCGGATTATATA
CGCATCCACACTTTTCTTAGCTGTCATATTCATTATTCCCTGCGCCGTCG
CTCCAAATATTGGAACCCTCATCGTCTGCAGAGCCATTGATGGGATCGCG
TTCAGTGCTCCAATGACGCTAGTGGGTGGTACTTTGGCGGATCTTTGGAA
GAATGAAGAACGAGGCGTTCCAATGGCAGCATTCTCAGCCAGCCCATTTA
TTGGGCCTGCTATTGGACCACTAGCTGGTGGATTTCTTGCAGATGCTACC
AACTGGAAATGGCTTTACTGGTTGCAGTTGATCCTTGCATTTGTTGCTTG
GGTGCTGATCACTTTCACGGTTCCGGAGACATATGCGCCAACTCTCCTTA
AGAGGAGAGCGAAGAAACTGAGAAAGCAAGAAGACGACCCTAGCTACGTA
ACAGAGACGGAACTAGATTCTCGACCTATGGGGGAGAAGTTGCGAGTTTT
CCTCTTCCGCCCGTTCCAGCTTTTGTTTCTGGAACCGATTGTTCTGTTCA
TCGCGCTTTACATGTCGGTTCTATACGGTTTACTATACATGTTCTTCGTT
GCGTAAGTGGTGTGCTATCTGATACTATTACTATCTTGCTAACTGCAGTG
TCAGCTATCCTGTGGTATATCAATCTGGGAAAGGATGGAGTGCCGGCTCA
ACTGGCCTAATGTTCATCCCACTCGCCATTGGCGTACTTATGAGTGCGGC
TTGTGCGCCTTTTGTCAATAAACACTACCTATCTCTTTATGCTAAGTACG
GAGGAAAGCCCCCAGCTGAAGCTCGATTGATTCCGATGATGGCTTCTTGT
TGGTTTATACCCATCGGTCTGTTCATTTTCGCTTGGACCTCATATCCCAC
TATCCATTGGATTGGACCTGCAATTGGAGGTTGGCCTGTTGGATTTGGCT
TCATCTTCTTGTATAATTCGGCCAACAATTATCTGGGTATGTTCATCCTT
ATAGGTCATTGGGCGTTTCCGCTGACATTGTTCTAGTGGATACGTATCAG
CATCAAGCCGCTTCTGCACTTGCCGCAAAGACATTCCTTCGTTCAATGTG
GGGTGCATCTACTGTACTCTTTACTGAGCAGATGTACGATCGCCTTGGGT
ACCAATGGGCAAGCTCGTTGCTCGCTTTCATTGCCCTAGCTTGCTGTGCG
ATCCCGTATGTCTTCTACTTCAAGGGGGCATCCATTCGACGATTTTCGCG
TTATGCCTTCAGCGACGACGAAGAGAATGGTGAGAAGAGCTAA
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Coding sequence (CDS) from alignment at An02:2461779..2463571+

>CBS51388_002022-T1 ID=CBS51388_002022-T1|Name=CBS51388_002022-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5652bp|location=Sequence derived from alignment at An02:2461779..2463571+ (Aspergillus niger CBS 513.88)
ATGACGACCGCTCAAGATATGGAGGAAATATACCGCTCCAACTATCCAAG
CAACCATGTCTCCCGAGTCCTTACAGCCGATCCTACTCAAGGTCAGGTTG
ATCCTTTGGATCTTCCTTACCGTCAGGTGACCGAGAACGCCAACATGGAG
GAATACACGACGGAAACCACCACAGGAGAGATCATCAAGCCAGTCCGGTC
CGCTGCTACAGGGAAAACAGAAGACTGGAAGCTGGTAACCTTCAGTATCG
ACGATCCCGAAAATCCGAAGAATTGGTCCAAAGCCTTCAAATGGTATTGT
ACCATGGTGGTTTCGTTCACATGCTTTGTCGTCGCTTTTGCTAGTAGCGT
CATCACAGCCGATATTGAAGGCCCTGCAGAACAGTTCGGCGTTTCTCGAG
AAGTTAGCCCTTGTTGTTGTTACTGTTTTGTCATCGGCTTTGGTGTTGGT
CCCATGGCTTTTGCTCCCCTGTCTGAAATGGTGGGCCGGCGGATTATATA
CGCATCCACACTTTTCTTAGCTGTCATATTCATTATTCCCTGCGCCGTCG
CTCCAAATATTGGAACCCTCATCGTCTGCAGAGCCATTGATGGGATCGCG
TTCAGTGCTCCAATGACGCTAGTGGGTGGTACTTTGGCGGATCTTTGGAA
GAATGAAGAACGAGGCGTTCCAATGGCAGCATTCTCAGCCAGCCCATTTA
TTGGGCCTGCTATTGGACCACTAGCTGGTGGATTTCTTGCAGATGCTACC
AACTGGAAATGGCTTTACTGGTTGCAGTTGATCCTTGCATTTGTTGCTTG
GGTGCTGATCACTTTCACGGTTCCGGAGACATATGCGCCAACTCTCCTTA
AGAGGAGAGCGAAGAAACTGAGAAAGCAAGAAGACGACCCTAGCTACGTA
ACAGAGACGGAACTAGATTCTCGACCTATGGGGGAGAAGTTGCGAGTTTT
CCTCTTCCGCCCGTTCCAGCTTTTGTTTCTGGAACCGATTGTTCTGTTCA
TCGCGCTTTACATGTCGGTTCTATACGGTTTACTATACATGTTCTTCGTT
GCTGTCAGCTATCCTGTGGTATATCAATCTGGGAAAGGATGGAGTGCCGG
CTCAACTGGCCTAATGTTCATCCCACTCGCCATTGGCGTACTTATGAGTG
CGGCTTTGGATACGTATCAGCATCAAGCCGCTTCTGCACTTGCCGCAAAG
ACATTCCTTCGTTCAATGTGGGGTGCATCTACTGTACTCTTTACTGAGCA
GATGTACGATCGCCTTGGGTACCAATGGGCAAGCTCGTTGCTCGCTTTCA
TTGCCCTAGCTTGCTGTGCGATCCCGTATGTCTTCTACTTCAAGGGGGCA
TCCATTCGACGATTTTCGCGTTATGCCTTCAGCGACGACGAAGAGAATGG
TGAGAAGAGCTAAATGACGACCGCTCAAGATATGGAGGAAATATACCGCT
CCAACTATCCAAGCAACCATGTCTCCCGAGTCCTTACAGCCGATCCTACT
CAAGGTCAGGTTGATCCTTTGGATCTTCCTTACCGTCAGGTGACCGAGAA
CGCCAACATGGAGGAATACACGACGGAAACCACCACAGGAGAGATCATCA
AGCCAGTCCGGTCCGCTGCTACAGGGAAAACAGAAGACTGGAAGCTGGTA
ACCTTCAGTATCGACGATCCCGAAAATCCGAAGAATTGGTCCAAAGCCTT
CAAATGGTATTGTACCATGGTGGTTTCGTTCACATGCTTTGTCGTCGCTT
TTGCTAGTAGCGTCATCACAGCCGATATTGAAGGCCCTGCAGAACAGTTC
GGCGTTTCTCGAGAAGTTAGCCCTTGTTGTTGTTACTGTTTTGTCATCGG
CTTTGGTGTTGGTCCCATGGCTTTTGCTCCCCTGTCTGAAATGGTGGGCC
GGCGGATTATATACGCATCCACACTTTTCTTAGCTGTCATATTCATTATT
CCCTGCGCCGTCGCTCCAAATATTGGAACCCTCATCGTCTGCAGAGCCAT
TGATGGGATCGCGTTCAGTGCTCCAATGACGCTAGTGGGTGGTACTTTGG
CGGATCTTTGGAAGAATGAAGAACGAGGCGTTCCAATGGCAGCATTCTCA
GCCAGCCCATTTATTGGGCCTGCTATTGGACCACTAGCTGGTGGATTTCT
TGCAGATGCTACCAACTGGAAATGGCTTTACTGGTTGCAGTTGATCCTTG
CATTTGTTGCTTGGGTGCTGATCACTTTCACGGTTCCGGAGACATATGCG
CCAACTCTCCTTAAGAGGAGAGCGAAGAAACTGAGAAAGCAAGAAGACGA
CCCTAGCTACGTAACAGAGACGGAACTAGATTCTCGACCTATGGGGGAGA
AGTTGCGAGTTTTCCTCTTCCGCCCGTTCCAGCTTTTGTTTCTGGAACCG
ATTGTTCTGTTCATCGCGCTTTACATGTCGGTTCTATACGGTTTACTATA
CATGTTCTTCGTTGCTGTCAGCTATCCTGTGGTATATCAATCTGGGAAAG
GATGGAGTGCCGGCTCAACTGGCCTAATGTTCATCCCACTCGCCATTGGC
GTACTTATGAGTGCGGCTTTGGATACGTATCAGCATCAAGCCGCTTCTGC
ACTTGCCGCAAAGACATTCCTTCGTTCAATGTGGGGTGCATCTACTGTAC
TCTTTACTGAGCAGATGTACGATCGCCTTGGGTACCAATGGGCAAGCTCG
TTGCTCGCTTTCATTGCCCTAGCTTGCTGTGCGATCCCGTATGTCTTCTA
CTTCAAGGGGGCATCCATTCGACGATTTTCGCGTTATGCCTTCAGCGACG
ACGAAGAGAATGGTGAGAAGAGCTAAATGACGACCGCTCAAGATATGGAG
GAAATATACCGCTCCAACTATCCAAGCAACCATGTCTCCCGAGTCCTTAC
AGCCGATCCTACTCAAGGTCAGGTTGATCCTTTGGATCTTCCTTACCGTC
AGGTGACCGAGAACGCCAACATGGAGGAATACACGACGGAAACCACCACA
GGAGAGATCATCAAGCCAGTCCGGTCCGCTGCTACAGGGAAAACAGAAGA
CTGGAAGCTGGTAACCTTCAGTATCGACGATCCCGAAAATCCGAAGAATT
GGTCCAAAGCCTTCAAATGGTATTGTACCATGGTGGTTTCGTTCACATGC
TTTGTCGTCGCTTTTGCTAGTAGCGTCATCACAGCCGATATTGAAGGCCC
TGCAGAACAGTTCGGCGTTTCTCGAGAAGTTAGCCCTTGTTGTTGTTACT
GTTTTGTCATCGGCTTTGGTGTTGGTCCCATGGCTTTTGCTCCCCTGTCT
GAAATGGTGGGCCGGCGGATTATATACGCATCCACACTTTTCTTAGCTGT
CATATTCATTATTCCCTGCGCCGTCGCTCCAAATATTGGAACCCTCATCG
TCTGCAGAGCCATTGATGGGATCGCGTTCAGTGCTCCAATGACGCTAGTG
GGTGGTACTTTGGCGGATCTTTGGAAGAATGAAGAACGAGGCGTTCCAAT
GGCAGCATTCTCAGCCAGCCCATTTATTGGGCCTGCTATTGGACCACTAG
CTGGTGGATTTCTTGCAGATGCTACCAACTGGAAATGGCTTTACTGGTTG
CAGTTGATCCTTGCATTTGTTGCTTGGGTGCTGATCACTTTCACGGTTCC
GGAGACATATGCGCCAACTCTCCTTAAGAGGAGAGCGAAGAAACTGAGAA
AGCAAGAAGACGACCCTAGCTACGTAACAGAGACGGAACTAGATTCTCGA
CCTATGGGGGAGAAGTTGCGAGTTTTCCTCTTCCGCCCGTTCCAGCTTTT
GTTTCTGGAACCGATTGTTCTGTTCATCGCGCTTTACATGTCGGTTCTAT
ACGGTTTACTATACATGTTCTTCGTTGCTGTCAGCTATCCTGTGGTATAT
CAATCTGGGAAAGGATGGAGTGCCGGCTCAACTGGCCTAATGTTCATCCC
ACTCGCCATTGGCGTACTTATGAGTGCGGCTTTGGATACGTATCAGCATC
AAGCCGCTTCTGCACTTGCCGCAAAGACATTCCTTCGTTCAATGTGGGGT
GCATCTACTGTACTCTTTACTGAGCAGATGTACGATCGCCTTGGGTACCA
ATGGGCAAGCTCGTTGCTCGCTTTCATTGCCCTAGCTTGCTGTGCGATCC
CGTATGTCTTCTACTTCAAGGGGGCATCCATTCGACGATTTTCGCGTTAT
GCCTTCAGCGACGACGAAGAGAATGGTGAGAAGAGCTAAATGACGACCGC
TCAAGATATGGAGGAAATATACCGCTCCAACTATCCAAGCAACCATGTCT
CCCGAGTCCTTACAGCCGATCCTACTCAAGGTCAGGTTGATCCTTTGGAT
CTTCCTTACCGTCAGGTGACCGAGAACGCCAACATGGAGGAATACACGAC
GGAAACCACCACAGGAGAGATCATCAAGCCAGTCCGGTCCGCTGCTACAG
GGAAAACAGAAGACTGGAAGCTGGTAACCTTCAGTATCGACGATCCCGAA
AATCCGAAGAATTGGTCCAAAGCCTTCAAATGGTATTGTACCATGGTGGT
TTCGTTCACATGCTTTGTCGTCGCTTTTGCTAGTAGCGTCATCACAGCCG
ATATTGAAGGCCCTGCAGAACAGTTCGGCGTTTCTCGAGAAGTTAGCCCT
TGTTGTTGTTACTGTTTTGTCATCGGCTTTGGTGTTGGTCCCATGGCTTT
TGCTCCCCTGTCTGAAATGGTGGGCCGGCGGATTATATACGCATCCACAC
TTTTCTTAGCTGTCATATTCATTATTCCCTGCGCCGTCGCTCCAAATATT
GGAACCCTCATCGTCTGCAGAGCCATTGATGGGATCGCGTTCAGTGCTCC
AATGACGCTAGTGGGTGGTACTTTGGCGGATCTTTGGAAGAATGAAGAAC
GAGGCGTTCCAATGGCAGCATTCTCAGCCAGCCCATTTATTGGGCCTGCT
ATTGGACCACTAGCTGGTGGATTTCTTGCAGATGCTACCAACTGGAAATG
GCTTTACTGGTTGCAGTTGATCCTTGCATTTGTTGCTTGGGTGCTGATCA
CTTTCACGGTTCCGGAGACATATGCGCCAACTCTCCTTAAGAGGAGAGCG
AAGAAACTGAGAAAGCAAGAAGACGACCCTAGCTACGTAACAGAGACGGA
ACTAGATTCTCGACCTATGGGGGAGAAGTTGCGAGTTTTCCTCTTCCGCC
CGTTCCAGCTTTTGTTTCTGGAACCGATTGTTCTGTTCATCGCGCTTTAC
ATGTCGGTTCTATACGGTTTACTATACATGTTCTTCGTTGCTGTCAGCTA
TCCTGTGGTATATCAATCTGGGAAAGGATGGAGTGCCGGCTCAACTGGCC
TAATGTTCATCCCACTCGCCATTGGCGTACTTATGAGTGCGGCTTTGGAT
ACGTATCAGCATCAAGCCGCTTCTGCACTTGCCGCAAAGACATTCCTTCG
TTCAATGTGGGGTGCATCTACTGTACTCTTTACTGAGCAGATGTACGATC
GCCTTGGGTACCAATGGGCAAGCTCGTTGCTCGCTTTCATTGCCCTAGCT
TGCTGTGCGATCCCGTATGTCTTCTACTTCAAGGGGGCATCCATTCGACG
ATTTTCGCGTTATGCCTTCAGCGACGACGAAGAGAATGGTGAGAAGAGCT
AA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002022CBS51388_002022Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002022-T1.exon1CBS51388_002022-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_002022-T1.exon2CBS51388_002022-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002022-T1.exon3CBS51388_002022-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_002022-T1.exon4CBS51388_002022-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002022-T1.cdsCBS51388_002022-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002022-T1CBS51388_002022-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:2461779..2463571 +
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