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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2831162..2833036+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002138-T1 ID=CBS51388_002138-T1|Name=CBS51388_002138-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1875bp|location=Sequence derived from alignment at An02:2831162..2833036+ (Aspergillus niger CBS 513.88)
ATGATGATGCAAATACTTGGGACCCTGCTGACCCTAGCAGCTCTGGCCAT
TGCACACGATGGGCCTGATCTCAATCTCTTTGACTATGATCAGCGTGGGC
CTCTCTTGGGAACTTGGTTCGGTATACCCGGGCAAAATGCAACGTTCGAC
TACGTCGTTATAGGCGGAGGCACCGCCGGGTTGACTATTGCCAGTCGGCT
GGTCAAGAGCGGATATCTCAGTGTGGCTGTTGTTGAGGCTGGCGGTTTCT
ACGAATTCGACAACGGTGACCTCTCTGTGGTCCCAGAATACGCAACCTTC
TTCGCCGGGCCAGATCCCAGTGACTACCAGCCATTAATTGATTGGGGCTT
TCAGACTCAACCCCAGGAGAGCTTGGGTAATCGAACCCTCCATTATGCGC
GCGGGAAAACGCTAGGGGGTAGCTCAGGACGAAACTGCATGTACTACCAG
CGTCCCACCATGGGCAGCTTACATACGTGGGCGAAAGAGGTGGATGACAA
GAGCTATGAATTCCTCAATATGCTGCCCTACTATAAAAAGTCTGTGCATT
TCACTCCCCCGGACGAGAGGCTTTTCATCAACTCGACCAACATACAAAAC
CCAGAAGCTTTCAGCTTGTCTGGTGGACCTTTAGAGGTCTCGTCGGGTAA
CTTCGTCGATGGCTTTGGAACCTGGTTCCGCAAAGCACTCATTGCTCTGG
GGTTAAAACAGACTGAGTTCAATAGCGGCAGTCTGTTGGGTTCTGGCTAT
TCAACCCTGACTATTAATCCAATCAATGCACATCGGTCTTCATCGGAAAC
AAGCTTTTTGCAATGGACGCTCGGTTGTGGCCTAGGCCCTGTGATATATC
ATAAGACGCTTGCGCAGAAGATATTGTTTGATAATCATCGAGTCGCAACT
GGCGTCCAGGTTGAAACGGCTGGGACTTTTGGCGTTGCACCGCTTAACTT
TACCCTCAGTGCTCAGAAGGGGGTTATATTGTCGGCAGGAGCCATTCAGT
CTCCTCATTTACTGATGGTATCAGGAATTGGTCCGCATGACCAACTTTTC
CGGTTCAACATCAGCTGCGTCAGTCATCTTCCAGGCGTCGGCCATAATCT
ACAGGATCATGTCTCCGCCGGAACGACGCATCGTGTGGATGTTCCAACTG
TAGCCACGTTAGCTGATGATGATACTCTGGTGGAGTCCAATGTCAAGCAA
TACATCGTGAACGCCACCGGTCCACTGTCCATCCCGGGTCCAGGTTACTT
CGGGTGGGAGAAACTACCAAAACCTTTCCGTTGGCGCCTCTCCAATGAAT
CCATCCAAGCACTCTCCACGTTACCGGAAGACTGGCCAGAAATCGTATAT
ACTGTCGGTTGCTCTTCCAAACCCGCTAATGCGACTGCTGGTCAAATATA
TGCTACCATCAACTTCGTCGGCATTGCACCTTTCTCCCGCGGTAACATAT
CGCTAGCAGGTCCAAATATGACAACCCCTCCCATCATTAACCCTCAATGG
TTGACAAACCCCACGGACGTGGAGCTAATGGTAGGCGCGTTCAATCGGAG
CCGTCAGATTTGGGCAAAATTGGCCGACCTAGGCGTCGCTGATCCGGTAG
AGATTTCACCGGGAAACAATGTGACGACATATGAGCAGATACTTGACTTT
ATCCGCAGATCCTTGACAACGATTTCACACGCATCTTCAACATGCAAGAT
GGGACGGAAAGACGACCCAATGGCGGTCGTGGATAGCTCGGCGCGGGTGT
ACGGAGTCCAGAGATTACGGGTTGTTGATGCGAGCAGTTTTCCATTCCTA
CCTCCAGGGGCTCCTCAGTCAACAGTTTATGCTTTTGCAGAGAAGATCGC
CGAGGAGATACTGTACGGGTTGTGA back to topCoding sequence (CDS) from alignment at An02:2831162..2833036+ >CBS51388_002138-T1 ID=CBS51388_002138-T1|Name=CBS51388_002138-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1875bp|location=Sequence derived from alignment at An02:2831162..2833036+ (Aspergillus niger CBS 513.88)
ATGATGATGCAAATACTTGGGACCCTGCTGACCCTAGCAGCTCTGGCCAT
TGCACACGATGGGCCTGATCTCAATCTCTTTGACTATGATCAGCGTGGGC
CTCTCTTGGGAACTTGGTTCGGTATACCCGGGCAAAATGCAACGTTCGAC
TACGTCGTTATAGGCGGAGGCACCGCCGGGTTGACTATTGCCAGTCGGCT
GGTCAAGAGCGGATATCTCAGTGTGGCTGTTGTTGAGGCTGGCGGTTTCT
ACGAATTCGACAACGGTGACCTCTCTGTGGTCCCAGAATACGCAACCTTC
TTCGCCGGGCCAGATCCCAGTGACTACCAGCCATTAATTGATTGGGGCTT
TCAGACTCAACCCCAGGAGAGCTTGGGTAATCGAACCCTCCATTATGCGC
GCGGGAAAACGCTAGGGGGTAGCTCAGGACGAAACTGCATGTACTACCAG
CGTCCCACCATGGGCAGCTTACATACGTGGGCGAAAGAGGTGGATGACAA
GAGCTATGAATTCCTCAATATGCTGCCCTACTATAAAAAGTCTGTGCATT
TCACTCCCCCGGACGAGAGGCTTTTCATCAACTCGACCAACATACAAAAC
CCAGAAGCTTTCAGCTTGTCTGGTGGACCTTTAGAGGTCTCGTCGGGTAA
CTTCGTCGATGGCTTTGGAACCTGGTTCCGCAAAGCACTCATTGCTCTGG
GGTTAAAACAGACTGAGTTCAATAGCGGCAGTCTGTTGGGTTCTGGCTAT
TCAACCCTGACTATTAATCCAATCAATGCACATCGGTCTTCATCGGAAAC
AAGCTTTTTGCAATGGACGCTCGGTTGTGGCCTAGGCCCTGTGATATATC
ATAAGACGCTTGCGCAGAAGATATTGTTTGATAATCATCGAGTCGCAACT
GGCGTCCAGGTTGAAACGGCTGGGACTTTTGGCGTTGCACCGCTTAACTT
TACCCTCAGTGCTCAGAAGGGGGTTATATTGTCGGCAGGAGCCATTCAGT
CTCCTCATTTACTGATGGTATCAGGAATTGGTCCGCATGACCAACTTTTC
CGGTTCAACATCAGCTGCGTCAGTCATCTTCCAGGCGTCGGCCATAATCT
ACAGGATCATGTCTCCGCCGGAACGACGCATCGTGTGGATGTTCCAACTG
TAGCCACGTTAGCTGATGATGATACTCTGGTGGAGTCCAATGTCAAGCAA
TACATCGTGAACGCCACCGGTCCACTGTCCATCCCGGGTCCAGGTTACTT
CGGGTGGGAGAAACTACCAAAACCTTTCCGTTGGCGCCTCTCCAATGAAT
CCATCCAAGCACTCTCCACGTTACCGGAAGACTGGCCAGAAATCGTATAT
ACTGTCGGTTGCTCTTCCAAACCCGCTAATGCGACTGCTGGTCAAATATA
TGCTACCATCAACTTCGTCGGCATTGCACCTTTCTCCCGCGGTAACATAT
CGCTAGCAGGTCCAAATATGACAACCCCTCCCATCATTAACCCTCAATGG
TTGACAAACCCCACGGACGTGGAGCTAATGGTAGGCGCGTTCAATCGGAG
CCGTCAGATTTGGGCAAAATTGGCCGACCTAGGCGTCGCTGATCCGGTAG
AGATTTCACCGGGAAACAATGTGACGACATATGAGCAGATACTTGACTTT
ATCCGCAGATCCTTGACAACGATTTCACACGCATCTTCAACATGCAAGAT
GGGACGGAAAGACGACCCAATGGCGGTCGTGGATAGCTCGGCGCGGGTGT
ACGGAGTCCAGAGATTACGGGTTGTTGATGCGAGCAGTTTTCCATTCCTA
CCTCCAGGGGCTCCTCAGTCAACAGTTTATGCTTTTGCAGAGAAGATCGC
CGAGGAGATACTGTACGGGTTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | CAZy:AA3_3 |
| Note | CAZy:AA3_2 |
| Note | CAZy:AA3 |
| DBxref | InterPro:IPR007867 |
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR012132 |
| DBxref | InterPro:IPR000172 |
| DBxref | PFAM:PF00732 |
| DBxref | PFAM:PF05199 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2831162..2833036 + |
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