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CBS51388_002199-T1, CBS51388_002199-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002199-T1
Unique NameCBS51388_002199-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:3003262..3004519-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002199-T1 ID=CBS51388_002199-T1|Name=CBS51388_002199-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1258bp|location=Sequence derived from alignment at An02:3003262..3004519- (Aspergillus niger CBS 513.88)
ATGCGGCCTATTTTGCTCTCCGGCCATGTGCGTTTCGCCTATACCCACCC
CCGAACGCGATGATGGTCGCCCAGGAGCTAGGAACATGATATGAAAATCG
GGAAATAAAAGGGAATAAGGACGGGTCGCTGATTGATTTTTTGCTTAATA
GGAACGGTCTCTGAACCAAATCAAGTTCAACCGCGATGGCGATCTTATCT
TCTCCGTGGCTAAGGATAAAATTGTGTGCGCCTGGTGGTCGGCCAACGGC
GAGCGACTCGGTACCTACAATGGACACCAGGGTGCTATCTGGACGGTCGA
TGTGAGCCCGAACACTCAGATTCTGGCAACCGGTTCGGCAGACAACACCG
TGCGACTATGGAACGTGAAGACCGGCGAGTGCATCAAGGTGTGGGACTTC
CCTACGGCCGTCAAGCGGGTTCGAGTTCACCCCCCGATGGAAGCAGACTG
TTGGCCTGTGACGGAGAAGCGTATGGGGTTTCTTGGGTACCATTGCGGTG
TTGGATATCAACTACGGCGAGAACTTGACGGAGCAGGCTGAGGAGCCTAG
CTTGCGCATCACCTGCACAGAGAGCAAGGCAACGGTTGCGGGCTGGAGTT
ACATGGGCAAGTACATCATTGCTGGTCACGAAGACGGCAGTGTCAGCCAG
TACGATGGAAAGGTGCGGAGAAATGCTTGTGTTTTGTTATGCATTTGGGG
CTAGATGCTAACTGGGTGATGACAGACCGGTGAGCAGCTGGAGAACGTCC
AGGCCCACGAGTTCGACCACCAGATCAACGACATCCAGTTCTCCGCCGAC
CGCACCTACTTCATCACTGCCTCCAAGGACAAGTCCGCCAAGGTACATAA
GCCTGCTACTATGCATGTCAAACGATTTTAAATGCTAACTCAACCCAGCT
CATGTCTACCCGTAACCTCGCCATCCTCAAAACCTATGTTGCCGACACTC
CCCTGAACAGCGCCACCATTACGCCCAAGAAGGACTACGTGATCCTGGGA
GGTGGTCAGGCCGCCATGGATGTCACCACGACCTCGGCCCGCCAGGGTAA
GTTCGAGGCTCGTTTCTACCACAAGGTCTTCGAGGACGAGATCGGTCGTG
TCCGTGGTCATTTCGGTCCCCTCAACACGGTTCACATCCACCCCGCCGGT
ACTGCCTACGCCTCTGGAGGTGAGGACGGTTACGTCCGTGTGCACCACTT
CGACAAGCCCTACTTCGACTTCATGTACGAGGTCGAGCGCGAGCAGCTGA
GGAAGTGA
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Coding sequence (CDS) from alignment at An02:3003262..3004519-

>CBS51388_002199-T1 ID=CBS51388_002199-T1|Name=CBS51388_002199-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4695bp|location=Sequence derived from alignment at An02:3003262..3004519- (Aspergillus niger CBS 513.88)
CTCATGTCTACCCGTAACCTCGCCATCCTCAAAACCTATGTTGCCGACAC
TCCCCTGAACAGCGCCACCATTACGCCCAAGAAGGACTACGTGATCCTGG
GAGGTGGTCAGGCCGCCATGGATGTCACCACGACCTCGGCCCGCCAGGGT
AAGTTCGAGGCTCGTTTCTACCACAAGGTCTTCGAGGACGAGATCGGTCG
TGTCCGTGGTCATTTCGGTCCCCTCAACACGGTTCACATCCACCCCGCCG
GTACTGCCTACGCCTCTGGAGGTGAGGACGGTTACGTCCGTGTGCACCAC
TTCGACAAGCCCTACTTCGACTTCATGTACGAGGTCGAGCGCGAGCAGCT
GAGGAAGTGAACCGGTGAGCAGCTGGAGAACGTCCAGGCCCACGAGTTCG
ACCACCAGATCAACGACATCCAGTTCTCCGCCGACCGCACCTACTTCATC
ACTGCCTCCAAGGACAAGTCCGCCAAGAAGCGTATGGGGTTTCTTGGGTA
CCATTGCGGTGTTGGATATCAACTACGGCGAGAACTTGACGGAGCAGGCT
GAGGAGCCTAGCTTGCGCATCACCTGCACAGAGAGCAAGGCAACGGTTGC
GGGCTGGAGTTACATGGGCAAGTACATCATTGCTGGTCACGAAGACGGCA
GTGTCAGCCAGTACGATGGAAAGGAACGGTCTCTGAACCAAATCAAGTTC
AACCGCGATGGCGATCTTATCTTCTCCGTGGCTAAGGATAAAATTGTGTG
CGCCTGGTGGTCGGCCAACGGCGAGCGACTCGGTACCTACAATGGACACC
AGGGTGCTATCTGGACGGTCGATGTGAGCCCGAACACTCAGATTCTGGCA
ACCGGTTCGGCAGACAACACCGTGCGACTATGGAACGTGAAGACCGGCGA
GTGCATCAAGGTATGCGGCCTATTTTGCTCTCCGGCCATCTCATGTCTAC
CCGTAACCTCGCCATCCTCAAAACCTATGTTGCCGACACTCCCCTGAACA
GCGCCACCATTACGCCCAAGAAGGACTACGTGATCCTGGGAGGTGGTCAG
GCCGCCATGGATGTCACCACGACCTCGGCCCGCCAGGGTAAGTTCGAGGC
TCGTTTCTACCACAAGGTCTTCGAGGACGAGATCGGTCGTGTCCGTGGTC
ATTTCGGTCCCCTCAACACGGTTCACATCCACCCCGCCGGTACTGCCTAC
GCCTCTGGAGGTGAGGACGGTTACGTCCGTGTGCACCACTTCGACAAGCC
CTACTTCGACTTCATGTACGAGGTCGAGCGCGAGCAGCTGAGGAAGTGAA
CCGGTGAGCAGCTGGAGAACGTCCAGGCCCACGAGTTCGACCACCAGATC
AACGACATCCAGTTCTCCGCCGACCGCACCTACTTCATCACTGCCTCCAA
GGACAAGTCCGCCAAGAAGCGTATGGGGTTTCTTGGGTACCATTGCGGTG
TTGGATATCAACTACGGCGAGAACTTGACGGAGCAGGCTGAGGAGCCTAG
CTTGCGCATCACCTGCACAGAGAGCAAGGCAACGGTTGCGGGCTGGAGTT
ACATGGGCAAGTACATCATTGCTGGTCACGAAGACGGCAGTGTCAGCCAG
TACGATGGAAAGGAACGGTCTCTGAACCAAATCAAGTTCAACCGCGATGG
CGATCTTATCTTCTCCGTGGCTAAGGATAAAATTGTGTGCGCCTGGTGGT
CGGCCAACGGCGAGCGACTCGGTACCTACAATGGACACCAGGGTGCTATC
TGGACGGTCGATGTGAGCCCGAACACTCAGATTCTGGCAACCGGTTCGGC
AGACAACACCGTGCGACTATGGAACGTGAAGACCGGCGAGTGCATCAAGG
TATGCGGCCTATTTTGCTCTCCGGCCATCTCATGTCTACCCGTAACCTCG
CCATCCTCAAAACCTATGTTGCCGACACTCCCCTGAACAGCGCCACCATT
ACGCCCAAGAAGGACTACGTGATCCTGGGAGGTGGTCAGGCCGCCATGGA
TGTCACCACGACCTCGGCCCGCCAGGGTAAGTTCGAGGCTCGTTTCTACC
ACAAGGTCTTCGAGGACGAGATCGGTCGTGTCCGTGGTCATTTCGGTCCC
CTCAACACGGTTCACATCCACCCCGCCGGTACTGCCTACGCCTCTGGAGG
TGAGGACGGTTACGTCCGTGTGCACCACTTCGACAAGCCCTACTTCGACT
TCATGTACGAGGTCGAGCGCGAGCAGCTGAGGAAGTGAACCGGTGAGCAG
CTGGAGAACGTCCAGGCCCACGAGTTCGACCACCAGATCAACGACATCCA
GTTCTCCGCCGACCGCACCTACTTCATCACTGCCTCCAAGGACAAGTCCG
CCAAGAAGCGTATGGGGTTTCTTGGGTACCATTGCGGTGTTGGATATCAA
CTACGGCGAGAACTTGACGGAGCAGGCTGAGGAGCCTAGCTTGCGCATCA
CCTGCACAGAGAGCAAGGCAACGGTTGCGGGCTGGAGTTACATGGGCAAG
TACATCATTGCTGGTCACGAAGACGGCAGTGTCAGCCAGTACGATGGAAA
GGAACGGTCTCTGAACCAAATCAAGTTCAACCGCGATGGCGATCTTATCT
TCTCCGTGGCTAAGGATAAAATTGTGTGCGCCTGGTGGTCGGCCAACGGC
GAGCGACTCGGTACCTACAATGGACACCAGGGTGCTATCTGGACGGTCGA
TGTGAGCCCGAACACTCAGATTCTGGCAACCGGTTCGGCAGACAACACCG
TGCGACTATGGAACGTGAAGACCGGCGAGTGCATCAAGGTATGCGGCCTA
TTTTGCTCTCCGGCCATCTCATGTCTACCCGTAACCTCGCCATCCTCAAA
ACCTATGTTGCCGACACTCCCCTGAACAGCGCCACCATTACGCCCAAGAA
GGACTACGTGATCCTGGGAGGTGGTCAGGCCGCCATGGATGTCACCACGA
CCTCGGCCCGCCAGGGTAAGTTCGAGGCTCGTTTCTACCACAAGGTCTTC
GAGGACGAGATCGGTCGTGTCCGTGGTCATTTCGGTCCCCTCAACACGGT
TCACATCCACCCCGCCGGTACTGCCTACGCCTCTGGAGGTGAGGACGGTT
ACGTCCGTGTGCACCACTTCGACAAGCCCTACTTCGACTTCATGTACGAG
GTCGAGCGCGAGCAGCTGAGGAAGTGAACCGGTGAGCAGCTGGAGAACGT
CCAGGCCCACGAGTTCGACCACCAGATCAACGACATCCAGTTCTCCGCCG
ACCGCACCTACTTCATCACTGCCTCCAAGGACAAGTCCGCCAAGAAGCGT
ATGGGGTTTCTTGGGTACCATTGCGGTGTTGGATATCAACTACGGCGAGA
ACTTGACGGAGCAGGCTGAGGAGCCTAGCTTGCGCATCACCTGCACAGAG
AGCAAGGCAACGGTTGCGGGCTGGAGTTACATGGGCAAGTACATCATTGC
TGGTCACGAAGACGGCAGTGTCAGCCAGTACGATGGAAAGGAACGGTCTC
TGAACCAAATCAAGTTCAACCGCGATGGCGATCTTATCTTCTCCGTGGCT
AAGGATAAAATTGTGTGCGCCTGGTGGTCGGCCAACGGCGAGCGACTCGG
TACCTACAATGGACACCAGGGTGCTATCTGGACGGTCGATGTGAGCCCGA
ACACTCAGATTCTGGCAACCGGTTCGGCAGACAACACCGTGCGACTATGG
AACGTGAAGACCGGCGAGTGCATCAAGGTATGCGGCCTATTTTGCTCTCC
GGCCATCTCATGTCTACCCGTAACCTCGCCATCCTCAAAACCTATGTTGC
CGACACTCCCCTGAACAGCGCCACCATTACGCCCAAGAAGGACTACGTGA
TCCTGGGAGGTGGTCAGGCCGCCATGGATGTCACCACGACCTCGGCCCGC
CAGGGTAAGTTCGAGGCTCGTTTCTACCACAAGGTCTTCGAGGACGAGAT
CGGTCGTGTCCGTGGTCATTTCGGTCCCCTCAACACGGTTCACATCCACC
CCGCCGGTACTGCCTACGCCTCTGGAGGTGAGGACGGTTACGTCCGTGTG
CACCACTTCGACAAGCCCTACTTCGACTTCATGTACGAGGTCGAGCGCGA
GCAGCTGAGGAAGTGAACCGGTGAGCAGCTGGAGAACGTCCAGGCCCACG
AGTTCGACCACCAGATCAACGACATCCAGTTCTCCGCCGACCGCACCTAC
TTCATCACTGCCTCCAAGGACAAGTCCGCCAAGAAGCGTATGGGGTTTCT
TGGGTACCATTGCGGTGTTGGATATCAACTACGGCGAGAACTTGACGGAG
CAGGCTGAGGAGCCTAGCTTGCGCATCACCTGCACAGAGAGCAAGGCAAC
GGTTGCGGGCTGGAGTTACATGGGCAAGTACATCATTGCTGGTCACGAAG
ACGGCAGTGTCAGCCAGTACGATGGAAAGGAACGGTCTCTGAACCAAATC
AAGTTCAACCGCGATGGCGATCTTATCTTCTCCGTGGCTAAGGATAAAAT
TGTGTGCGCCTGGTGGTCGGCCAACGGCGAGCGACTCGGTACCTACAATG
GACACCAGGGTGCTATCTGGACGGTCGATGTGAGCCCGAACACTCAGATT
CTGGCAACCGGTTCGGCAGACAACACCGTGCGACTATGGAACGTGAAGAC
CGGCGAGTGCATCAAGGTATGCGGCCTATTTTGCTCTCCGGCCAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIF34CBS51388_002199Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002199-T1CBS51388_002199-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002199-T1.cdsCBS51388_002199-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002199-T1.exon5CBS51388_002199-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_002199-T1.exon4CBS51388_002199-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_002199-T1.exon3CBS51388_002199-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_002199-T1.exon2CBS51388_002199-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002199-T1.exon1CBS51388_002199-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09262W7C
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR027525
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producttranslation initiation factor eIF3 subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:3003262..3004519 -
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