You are here

Home

CBS51388_002233-T1, CBS51388_002233-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002233-T1
Unique NameCBS51388_002233-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:3097944..3098404-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002233-T1 ID=CBS51388_002233-T1|Name=CBS51388_002233-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=461bp|location=Sequence derived from alignment at An02:3097944..3098404- (Aspergillus niger CBS 513.88)
ATGGCTGCATCCCAAGAGAGAAACTGGGACTTGTGCGGTCGAGAACAGTT
ATTCCTAGATCGGAGGAGACGTTGGCGAAGCTGAGGAGCTGTGCGGTCTA
TCGCGATGGGAGTGAGGAGCCGGTTGCGTGGGCGTTCCTCGGTACGGATG
GGACCTTGGCGACGTTGCATGTGGAAGAGGAGGTTAGGGGGTTGGGGTTG
GCTGGGGTGGTGGGGAGGGAGGTGATGAGGAGGGGCATTGAGGAGGATAT
GAGCCTGAATGATGGGTGGATGCACTCGAATGCGGCGGAGGATAATTTGG
CCAGTAGGAGGGTTATGGAGAAGTTGGGGGGGAGGGTGGGGTGGATGGTT
TGTTGGTGTGTTTTGGAGGTGTAGATTACACATGTTTGTTTGTATATATT
TGTTTAGGATTGTTAATATACGTATAGAATAGACCATTCTCAGCGCAAGG
AGATGCTATGA
back to top

Coding sequence (CDS) from alignment at An02:3097944..3098404-

>CBS51388_002233-T1 ID=CBS51388_002233-T1|Name=CBS51388_002233-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=918bp|location=Sequence derived from alignment at An02:3097944..3098404- (Aspergillus niger CBS 513.88)
ACCATTCTCAGCGCAAGGAGATGCTATGAATCGGAGGAGACGTTGGCGAA
GCTGAGGAGCTGTGCGGTCTATCGCGATGGGAGTGAGGAGCCGGTTGCGT
GGGCGTTCCTCGGTACGGATGGGACCTTGGCGACGTTGCATGTGGAAGAG
GAGGTTAGGGGGTTGGGGTTGGCTGGGGTGGTGGGGAGGGAGGTGATGAG
GAGGGGCATTGAGGAGGATATGAGCCTGAATGATGGGTGGATGCACTCGA
ATGCGGCGGAGGATAATTTGGCCAATGGCTGCATCCCAAGAGAGAAACTG
GGACTTACCATTCTCAGCGCAAGGAGATGCTATGAATCGGAGGAGACGTT
GGCGAAGCTGAGGAGCTGTGCGGTCTATCGCGATGGGAGTGAGGAGCCGG
TTGCGTGGGCGTTCCTCGGTACGGATGGGACCTTGGCGACGTTGCATGTG
GAAGAGGAGGTTAGGGGGTTGGGGTTGGCTGGGGTGGTGGGGAGGGAGGT
GATGAGGAGGGGCATTGAGGAGGATATGAGCCTGAATGATGGGTGGATGC
ACTCGAATGCGGCGGAGGATAATTTGGCCAATGGCTGCATCCCAAGAGAG
AAACTGGGACTTACCATTCTCAGCGCAAGGAGATGCTATGAATCGGAGGA
GACGTTGGCGAAGCTGAGGAGCTGTGCGGTCTATCGCGATGGGAGTGAGG
AGCCGGTTGCGTGGGCGTTCCTCGGTACGGATGGGACCTTGGCGACGTTG
CATGTGGAAGAGGAGGTTAGGGGGTTGGGGTTGGCTGGGGTGGTGGGGAG
GGAGGTGATGAGGAGGGGCATTGAGGAGGATATGAGCCTGAATGATGGGT
GGATGCACTCGAATGCGGCGGAGGATAATTTGGCCAATGGCTGCATCCCA
AGAGAGAAACTGGGACTT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002233CBS51388_002233Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002233-T1CBS51388_002233-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002233-T1.cdsCBS51388_002233-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002233-T1.exon3CBS51388_002233-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_002233-T1.exon2CBS51388_002233-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002233-T1.exon1CBS51388_002233-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR016181
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:3097944..3098404 -
Powered by Drupal