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CBS51388_002325-T1, CBS51388_002325-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002325-T1
Unique NameCBS51388_002325-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:3360436..3361161+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002325-T1 ID=CBS51388_002325-T1|Name=CBS51388_002325-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=726bp|location=Sequence derived from alignment at An02:3360436..3361161+ (Aspergillus niger CBS 513.88)
ATGTTCGCCATCCAACCAGCCCAGAACTCGTCCAACGAGACACCAACCGA
TAAATTCACTCCGAACATCCTGCCCTGTCGCATCCACCACGATGGCCCCG
TTGAAACTCTAGGCCGCTACTGGAATCCCACCTCTGATGAGAAAGGTATA
CACTGACTGCTTCGCATCCGGCAATTCGCTACCCACGCTCATTTTTCACA
GATCAGAACCTGCAAACAGCCTACTTCCGCGGCCGCAAGCTAAGGGGCCG
CCGAGTCGCGATTCCCGAAGGCTACGAGGGTGAGACTTGCCCGGCCACAT
CAATCCTTGAATGGTTCGCTAACAAATCGATTTAGGTGTCATTGCAATCC
CCACAGACCGTACGATGCCTACTACCCGTACAAGCGCCGACGTTGAGGTC
GAGGAAATCACACCAGAAGAACCTGTGAAGGTCCTTGAGAAGCAAGGCAC
ATTTGATGAATATGTTGTCTGGGGACATGAGTTTGTGCCTGCGGCAGATG
AGACCTTCGTTAAGGGAGTGGAGGAGTGGATCAAGCTTGCTGAAGTGGTA
GGTCGATCATTTTCCATAGGTCGTCCTCAGGCTAATGCAGTGTAGATGCA
TACGACTCCTGACAGTGAAAAGCAGCCGTCTACTTGAGGCAAGGCCTACA
GTGAACAATATCATTTCAGTACGAGGACTGCAAACTCTGCGTCCGCATAG
GACTGCGTTCTCTCGTCACTGGATAG
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Coding sequence (CDS) from alignment at An02:3360436..3361161+

>CBS51388_002325-T1 ID=CBS51388_002325-T1|Name=CBS51388_002325-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1968bp|location=Sequence derived from alignment at An02:3360436..3361161+ (Aspergillus niger CBS 513.88)
ATGTTCGCCATCCAACCAGCCCAGAACTCGTCCAACGAGACACCAACCGA
TAAATTCACTCCGAACATCCTGCCCTGTCGCATCCACCACGATGGCCCCG
TTGAAACTCTAGGCCGCTACTGGAATCCCACCTCTGATGAGAAAGATCAG
AACCTGCAAACAGCCTACTTCCGCGGCCGCAAGCTAAGGGGCCGCCGAGT
CGCGATTCCCGAAGGCTACGAGGGTGTCATTGCAATCCCCACAGACCGTA
CGATGCCTACTACCCGTACAAGCGCCGACGTTGAGGTCGAGGAAATCACA
CCAGAAGAACCTGTGAAGGTCCTTGAGAAGCAAGGCACATTTGATGAATA
TGTTGTCTGGGGACATGAGTTTGTGCCTGCGGCAGATGAGACCTTCGTTA
AGGGAGTGGAGGAGTGGATCAAGCTTGCTGAAGTGTACGAGGACTGCAAA
CTCTGCGTCCGCATAGGACTGCGTTCTCTCGTCACTGGATAGATGTTCGC
CATCCAACCAGCCCAGAACTCGTCCAACGAGACACCAACCGATAAATTCA
CTCCGAACATCCTGCCCTGTCGCATCCACCACGATGGCCCCGTTGAAACT
CTAGGCCGCTACTGGAATCCCACCTCTGATGAGAAAGATCAGAACCTGCA
AACAGCCTACTTCCGCGGCCGCAAGCTAAGGGGCCGCCGAGTCGCGATTC
CCGAAGGCTACGAGGGTGTCATTGCAATCCCCACAGACCGTACGATGCCT
ACTACCCGTACAAGCGCCGACGTTGAGGTCGAGGAAATCACACCAGAAGA
ACCTGTGAAGGTCCTTGAGAAGCAAGGCACATTTGATGAATATGTTGTCT
GGGGACATGAGTTTGTGCCTGCGGCAGATGAGACCTTCGTTAAGGGAGTG
GAGGAGTGGATCAAGCTTGCTGAAGTGTACGAGGACTGCAAACTCTGCGT
CCGCATAGGACTGCGTTCTCTCGTCACTGGATAGATGTTCGCCATCCAAC
CAGCCCAGAACTCGTCCAACGAGACACCAACCGATAAATTCACTCCGAAC
ATCCTGCCCTGTCGCATCCACCACGATGGCCCCGTTGAAACTCTAGGCCG
CTACTGGAATCCCACCTCTGATGAGAAAGATCAGAACCTGCAAACAGCCT
ACTTCCGCGGCCGCAAGCTAAGGGGCCGCCGAGTCGCGATTCCCGAAGGC
TACGAGGGTGTCATTGCAATCCCCACAGACCGTACGATGCCTACTACCCG
TACAAGCGCCGACGTTGAGGTCGAGGAAATCACACCAGAAGAACCTGTGA
AGGTCCTTGAGAAGCAAGGCACATTTGATGAATATGTTGTCTGGGGACAT
GAGTTTGTGCCTGCGGCAGATGAGACCTTCGTTAAGGGAGTGGAGGAGTG
GATCAAGCTTGCTGAAGTGTACGAGGACTGCAAACTCTGCGTCCGCATAG
GACTGCGTTCTCTCGTCACTGGATAGATGTTCGCCATCCAACCAGCCCAG
AACTCGTCCAACGAGACACCAACCGATAAATTCACTCCGAACATCCTGCC
CTGTCGCATCCACCACGATGGCCCCGTTGAAACTCTAGGCCGCTACTGGA
ATCCCACCTCTGATGAGAAAGATCAGAACCTGCAAACAGCCTACTTCCGC
GGCCGCAAGCTAAGGGGCCGCCGAGTCGCGATTCCCGAAGGCTACGAGGG
TGTCATTGCAATCCCCACAGACCGTACGATGCCTACTACCCGTACAAGCG
CCGACGTTGAGGTCGAGGAAATCACACCAGAAGAACCTGTGAAGGTCCTT
GAGAAGCAAGGCACATTTGATGAATATGTTGTCTGGGGACATGAGTTTGT
GCCTGCGGCAGATGAGACCTTCGTTAAGGGAGTGGAGGAGTGGATCAAGC
TTGCTGAAGTGTACGAGGACTGCAAACTCTGCGTCCGCATAGGACTGCGT
TCTCTCGTCACTGGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0032299ribonuclease H2 complex
Vocabulary: Biological Process
TermDefinition
GO:0006401RNA catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002325CBS51388_002325Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002325-T1.exon1CBS51388_002325-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_002325-T1.exon2CBS51388_002325-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002325-T1.exon3CBS51388_002325-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_002325-T1.exon4CBS51388_002325-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002325-T1.cdsCBS51388_002325-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002325-T1CBS51388_002325-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013924
DBxrefPFAM:PF08615
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:3360436..3361161 +
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