|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:3473383..3473872+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002355-T1 ID=CBS51388_002355-T1|Name=CBS51388_002355-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=490bp|location=Sequence derived from alignment at An02:3473383..3473872+ (Aspergillus niger CBS 513.88)
ATGTCTGAGACTTCTGCCGGTATGCACATCCCAGGTCTCGTTTTTCTCAT
GGCCATATACTGACAATTTCTATAGCCTGGCCCCTCGCCGATGAGGCCCT
TACCCAGAACCTCCTGGACCTTGTCCAGCAGGCCGGTCACTACCGCCAGC
TGAAGAAGGGTGCTAACGAGGGTATGTGCTTCCTCAAGAACACTCATTGT
CTGTCTGTCTGCTAACTGTCTTTGCAGCCACCAAGACTCTTAACCGTGGT
ACCTCCGAGCTCGTTATCCTCGCTGCCGACACCTCTCCCCTCGCTATCCT
CCTCCACATCCCCCTCCTTGCTGAGGACAAGAACACCCCTTATGTCTTCG
TGCCCAGCAAGCTTGCTCTCGGCCGTGCTACCGGTGTTTCCCGCCCCGTG
ATTGCGGCCAGTATCACCACCAACGAGGCCAGTGACCTCCAGGGCCAGAT
CAAGACCATCAAGGACAAGGTCGAGAGACTGATGATCTAA back to topCoding sequence (CDS) from alignment at An02:3473383..3473872+ >CBS51388_002355-T1 ID=CBS51388_002355-T1|Name=CBS51388_002355-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1134bp|location=Sequence derived from alignment at An02:3473383..3473872+ (Aspergillus niger CBS 513.88)
ATGTCTGAGACTTCTGCCGCCTGGCCCCTCGCCGATGAGGCCCTTACCCA
GAACCTCCTGGACCTTGTCCAGCAGGCCGGTCACTACCGCCAGCTGAAGA
AGGGTGCTAACGAGGCCACCAAGACTCTTAACCGTGGTACCTCCGAGCTC
GTTATCCTCGCTGCCGACACCTCTCCCCTCGCTATCCTCCTCCACATCCC
CCTCCTTGCTGAGGACAAGAACACCCCTTATGTCTTCGTGCCCAGCAAGC
TTGCTCTCGGCCGTGCTACCGGTGTTTCCCGCCCCGTGATTGCGGCCAGT
ATCACCACCAACGAGGCCAGTGACCTCCAGGGCCAGATCAAGACCATCAA
GGACAAGGTCGAGAGACTGATGATCTAAATGTCTGAGACTTCTGCCGCCT
GGCCCCTCGCCGATGAGGCCCTTACCCAGAACCTCCTGGACCTTGTCCAG
CAGGCCGGTCACTACCGCCAGCTGAAGAAGGGTGCTAACGAGGCCACCAA
GACTCTTAACCGTGGTACCTCCGAGCTCGTTATCCTCGCTGCCGACACCT
CTCCCCTCGCTATCCTCCTCCACATCCCCCTCCTTGCTGAGGACAAGAAC
ACCCCTTATGTCTTCGTGCCCAGCAAGCTTGCTCTCGGCCGTGCTACCGG
TGTTTCCCGCCCCGTGATTGCGGCCAGTATCACCACCAACGAGGCCAGTG
ACCTCCAGGGCCAGATCAAGACCATCAAGGACAAGGTCGAGAGACTGATG
ATCTAAATGTCTGAGACTTCTGCCGCCTGGCCCCTCGCCGATGAGGCCCT
TACCCAGAACCTCCTGGACCTTGTCCAGCAGGCCGGTCACTACCGCCAGC
TGAAGAAGGGTGCTAACGAGGCCACCAAGACTCTTAACCGTGGTACCTCC
GAGCTCGTTATCCTCGCTGCCGACACCTCTCCCCTCGCTATCCTCCTCCA
CATCCCCCTCCTTGCTGAGGACAAGAACACCCCTTATGTCTTCGTGCCCA
GCAAGCTTGCTCTCGGCCGTGCTACCGGTGTTTCCCGCCCCGTGATTGCG
GCCAGTATCACCACCAACGAGGCCAGTGACCTCCAGGGCCAGATCAAGAC
CATCAAGGACAAGGTCGAGAGACTGATGATCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005730 | nucleolus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029064 |
| DBxref | InterPro:IPR004038 |
| DBxref | InterPro:IPR018492 |
| DBxref | InterPro:IPR002415 |
| DBxref | PFAM:PF01248 |
| Product | RNA binding protein snu13 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:3473383..3473872 + |
|
