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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:3474760..3475931+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002356-T1 ID=CBS51388_002356-T1|Name=CBS51388_002356-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1172bp|location=Sequence derived from alignment at An02:3474760..3475931+ (Aspergillus niger CBS 513.88)
ATGGCCTTCACATCGCTTGCCGGGCTAGTCATAACAACGGCTATCGCAGT
CCTTAGTAGCGGTGTCGGTGCGTCGGCGGTTGGTAGTCTGACTACTGCCT
CCACCACCTCCATAACGCCGTCACCATCACCATCACCTACTATGCAAACT
GTGCCTTTTCATCTAGCTGGTCCAGATCCCACTGATGGAGACGACACCGG
AGAATGCAGGCTCCTAGGGCCCTTTTCGCTTCTCGTCCAAGCTGCGCTCG
GAGCATTGGCGCTGCTATCACTTGTCTACAAGCGCTGGCGGGAGAGACCT
CAGCGACCAGTGAAGGTGTGGGCGTTTGATGTCTCGAAGCAAGTCTTTGG
GTCCGCAATGCTGCACCTCGCCAATCTGCTCATGTCTATGTTCTCTGCGG
GCCAGCTCGAGATCCGGAGTAAATACAAACCGAATCCATGCTCCTTCTAC
ATATTGAACCTGGGAATCGATGTAAGCTTATCTCTACGCTCCATTATACG
GGGTACGTGCTGACATGGTTCGTTTTCAAGACCACGCTAGGCATCCCGAT
CCTCATTTTCATCCTTCACCTCCTCAACCGCTTAGCTTCGTATACGCCCC
TCGCCAATCCTCCGGAGTCTATCGAGTCTGGCAATTACGGAAGTCCACCG
CGCGCCTCATGGTGGTTCAAGCAATCGGTGATATATTTCATGGGACTGCT
GGGGATGAAGATTTGCGTCTTCTTCCTCATCCAGCTGCTGCCGTTCATCG
TTAAAGTAGGAGATTGGGCTCTCCGATGGACGGAAGGCAACACGGCAGTG
CAGATCATCTTTGTCATGCTGCTTTTCCCCGTCATTATGAATGCGATACA
GTATTACATCATCGACACCTTCATCAAGAAGCCGATAATGCTGGATACTC
TCGAAGAGGCGGAGCATGACACCCACGAACACCGCCATGCGCTCCTGGCG
GGCATTGATGAGGACGCATCGTTCGAGTCGGAGGATGACTCCGTTGGGAA
AGATGATGGCCCGGAAACTGTAAAAGAGGACCTAGTCCGGTTCGAGTCCG
CCGAATACAATCCAGCTCAAGTTGAGCACAGCTCTGCCGCGTCAGCCAGA
TCGGGTAGTAGTCACGGCGAGTATGGCGATTTGTCATCGTCCACCAAGCT
TACGTCCCAACATAAGGACTGA back to topCoding sequence (CDS) from alignment at An02:3474760..3475931+ >CBS51388_002356-T1 ID=CBS51388_002356-T1|Name=CBS51388_002356-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3042bp|location=Sequence derived from alignment at An02:3474760..3475931+ (Aspergillus niger CBS 513.88)
ATGGCCTTCACATCGCTTGCCGGGCTAGTCATAACAACGGCTATCGCAGT
CCTTAGTAGCGGTGTCGCTGGTCCAGATCCCACTGATGGAGACGACACCG
GAGAATGCAGGCTCCTAGGGCCCTTTTCGCTTCTCGTCCAAGCTGCGCTC
GGAGCATTGGCGCTGCTATCACTTGTCTACAAGCGCTGGCGGGAGAGACC
TCAGCGACCAGTGAAGGTGTGGGCGTTTGATGTCTCGAAGCAAGTCTTTG
GGTCCGCAATGCTGCACCTCGCCAATCTGCTCATGTCTATGTTCTCTGCG
GGCCAGCTCGAGATCCGGAGTAAATACAAACCGAATCCATGCTCCTTCTA
CATATTGAACCTGGGAATCGATACCACGCTAGGCATCCCGATCCTCATTT
TCATCCTTCACCTCCTCAACCGCTTAGCTTCGTATACGCCCCTCGCCAAT
CCTCCGGAGTCTATCGAGTCTGGCAATTACGGAAGTCCACCGCGCGCCTC
ATGGTGGTTCAAGCAATCGGTGATATATTTCATGGGACTGCTGGGGATGA
AGATTTGCGTCTTCTTCCTCATCCAGCTGCTGCCGTTCATCGTTAAAGTA
GGAGATTGGGCTCTCCGATGGACGGAAGGCAACACGGCAGTGCAGATCAT
CTTTGTCATGCTGCTTTTCCCCGTCATTATGAATGCGATACAGTATTACA
TCATCGACACCTTCATCAAGAAGCCGATAATGCTGGATACTCTCGAAGAG
GCGGAGCATGACACCCACGAACACCGCCATGCGCTCCTGGCGGGCATTGA
TGAGGACGCATCGTTCGAGTCGGAGGATGACTCCGTTGGGAAAGATGATG
GCCCGGAAACTGTAAAAGAGGACCTAGTCCGGTTCGAGTCCGCCGAATAC
AATCCAGCTCAAGTTGAGCACAGCTCTGCCGCGTCAGCCAGATCGGGTAG
TAGTCACGGCGAGTATGGCGATTTGTCATCGTCCACCAAGCTTACGTCCC
AACATAAGGACTGAATGGCCTTCACATCGCTTGCCGGGCTAGTCATAACA
ACGGCTATCGCAGTCCTTAGTAGCGGTGTCGCTGGTCCAGATCCCACTGA
TGGAGACGACACCGGAGAATGCAGGCTCCTAGGGCCCTTTTCGCTTCTCG
TCCAAGCTGCGCTCGGAGCATTGGCGCTGCTATCACTTGTCTACAAGCGC
TGGCGGGAGAGACCTCAGCGACCAGTGAAGGTGTGGGCGTTTGATGTCTC
GAAGCAAGTCTTTGGGTCCGCAATGCTGCACCTCGCCAATCTGCTCATGT
CTATGTTCTCTGCGGGCCAGCTCGAGATCCGGAGTAAATACAAACCGAAT
CCATGCTCCTTCTACATATTGAACCTGGGAATCGATACCACGCTAGGCAT
CCCGATCCTCATTTTCATCCTTCACCTCCTCAACCGCTTAGCTTCGTATA
CGCCCCTCGCCAATCCTCCGGAGTCTATCGAGTCTGGCAATTACGGAAGT
CCACCGCGCGCCTCATGGTGGTTCAAGCAATCGGTGATATATTTCATGGG
ACTGCTGGGGATGAAGATTTGCGTCTTCTTCCTCATCCAGCTGCTGCCGT
TCATCGTTAAAGTAGGAGATTGGGCTCTCCGATGGACGGAAGGCAACACG
GCAGTGCAGATCATCTTTGTCATGCTGCTTTTCCCCGTCATTATGAATGC
GATACAGTATTACATCATCGACACCTTCATCAAGAAGCCGATAATGCTGG
ATACTCTCGAAGAGGCGGAGCATGACACCCACGAACACCGCCATGCGCTC
CTGGCGGGCATTGATGAGGACGCATCGTTCGAGTCGGAGGATGACTCCGT
TGGGAAAGATGATGGCCCGGAAACTGTAAAAGAGGACCTAGTCCGGTTCG
AGTCCGCCGAATACAATCCAGCTCAAGTTGAGCACAGCTCTGCCGCGTCA
GCCAGATCGGGTAGTAGTCACGGCGAGTATGGCGATTTGTCATCGTCCAC
CAAGCTTACGTCCCAACATAAGGACTGAATGGCCTTCACATCGCTTGCCG
GGCTAGTCATAACAACGGCTATCGCAGTCCTTAGTAGCGGTGTCGCTGGT
CCAGATCCCACTGATGGAGACGACACCGGAGAATGCAGGCTCCTAGGGCC
CTTTTCGCTTCTCGTCCAAGCTGCGCTCGGAGCATTGGCGCTGCTATCAC
TTGTCTACAAGCGCTGGCGGGAGAGACCTCAGCGACCAGTGAAGGTGTGG
GCGTTTGATGTCTCGAAGCAAGTCTTTGGGTCCGCAATGCTGCACCTCGC
CAATCTGCTCATGTCTATGTTCTCTGCGGGCCAGCTCGAGATCCGGAGTA
AATACAAACCGAATCCATGCTCCTTCTACATATTGAACCTGGGAATCGAT
ACCACGCTAGGCATCCCGATCCTCATTTTCATCCTTCACCTCCTCAACCG
CTTAGCTTCGTATACGCCCCTCGCCAATCCTCCGGAGTCTATCGAGTCTG
GCAATTACGGAAGTCCACCGCGCGCCTCATGGTGGTTCAAGCAATCGGTG
ATATATTTCATGGGACTGCTGGGGATGAAGATTTGCGTCTTCTTCCTCAT
CCAGCTGCTGCCGTTCATCGTTAAAGTAGGAGATTGGGCTCTCCGATGGA
CGGAAGGCAACACGGCAGTGCAGATCATCTTTGTCATGCTGCTTTTCCCC
GTCATTATGAATGCGATACAGTATTACATCATCGACACCTTCATCAAGAA
GCCGATAATGCTGGATACTCTCGAAGAGGCGGAGCATGACACCCACGAAC
ACCGCCATGCGCTCCTGGCGGGCATTGATGAGGACGCATCGTTCGAGTCG
GAGGATGACTCCGTTGGGAAAGATGATGGCCCGGAAACTGTAAAAGAGGA
CCTAGTCCGGTTCGAGTCCGCCGAATACAATCCAGCTCAAGTTGAGCACA
GCTCTGCCGCGTCAGCCAGATCGGGTAGTAGTCACGGCGAGTATGGCGAT
TTGTCATCGTCCACCAAGCTTACGTCCCAACATAAGGACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-30) |
| DBxref | InterPro:IPR022127 |
| DBxref | PFAM:PF12400 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:3474760..3475931 + |
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