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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:3536051..3538027+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002377-T1 ID=CBS51388_002377-T1|Name=CBS51388_002377-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1977bp|location=Sequence derived from alignment at An02:3536051..3538027+ (Aspergillus niger CBS 513.88)
ATGTCTATTATAAATGGTCTGCTAGCACCCCTTACCCGCTTGCTTTACTA
TCACCACTGCTAACAAGACCACCTAGAGTCCATCTGGGCTGCCAGCCCCT
CCACCACCAGGGGTCAGCCCACTCAGCTTTCTGCGGACGCCAAGGGCGAA
CGGATTGCATATGCGGTATGGAATTAAATTTTCTGGCATCCATGCAAATA
AAATATTCGTCAATGCTTACTGTTCCTTTCTCGAAATCTTCAGGCAATCA
AATCGGTTTTCCTCCGCTCGATTGACAACCCCGCCATCGCCAGGCAGTAC
ACCGAACATAAGACGCAGACCACTGTTGCCCGCTTCTCACCCTCGGGCTT
CTATGTTGCCAGTGGTGATGCCAGTGGTATAGTGAGAGTCTGGGACTGTG
TTGGAGAGGGTATCACCAAGGGCGAATACAGCATTGTGAATGGCCGGATC
AATGATCTTGCCTGGGATGGCGATTCCCAGCGCATCATTGCCGTCGGTGA
TGGAAAGCAGCGCTACGGCCACTGCATTACTTGGGATAGTGGTAATACTG
TCGGAGAGATCTATGGCCACACCCAACAGATCAATTCCGTTTCGATCAGG
CAGCAAAGGCCATTGCGGGCCGCTGCTGCCGGTGACGACAAGAACCTAGT
CTTCTACCACGGTGCACCATTCAAGTTCAACACGGGAATCCGGGATAAGC
ACACCAACTATATCTATGGAGTCGGCTTCAGCCCGGACGGCTCGACATTG
GTCAGTGTTGGCGCGGACCGCAAGATCTGGCTGTACGATGGCAAGACGGG
AGAAGTCAGAGGCCAGATTGGCGAAGGAGAGCACAACGGCAGCATTTTCG
GCCTTTCGTGGTCTAAGGACTCGCGGAAGTTTGCGACAGCCAGCGCAGAC
AAGACTGTCAAGATTTGGGACGTGGAAGCGGGCAAGGTTACCCAGAGTTG
GAATATGGGAGAGGAAGGAGCTGCGAATGTTAAGGACCAGCAGGTCGGAG
TGGTCTGGCCTCAGGGAAGAAGCGATGGCCTGCTGATCAGTCTTTCGTTG
AGCGGCGACCTTAATTACCTAGTTGAAGGCACCCCGAAGCCCAGACAGGT
CGTCCAGGGACACCAGAAGAACATCACGTCCTTGACCCAGTCTCGCTCTG
GCAGCGATGCTGAGACCCTGTGGACTGGAAGTTTTGACGGCCGGGTCTGC
AGCTGGGATGTTCCCACTGGGGCTGCGGAAGAAATGGAAGGTGACAGCCA
CACGACCTATATTGCAGGTCTCGCGCCTACACAGGAAGGCAATGGTCGGA
TCTACAGCGTCGCCTGGGACGACACCATTCGCTCCGTGGATATAGGTGCC
AAGACCTATACCGGAATCTCTTCTAAGCTGTCGGGACAGCCCAAGGGCGT
TGCAGCCGCAAATGACTTGGTGTTAGTGGGAGCGTCGGAGAGCGTTGAGA
TCTACAAGGACGGACAGAAGACTGGCGACTTCAAGCCTGATTTCCCCGTC
ACTGCGGTTGCGGCTCATGGCAACGTTGCAGCTGTCGGAGGTGAAAATGC
GACCGTACAGATCTTGGATATTGCGGCCTCGAGCCTTTCCCCCAAGACTA
CCATCAAGGCTACGCGGAATGCGGTGTCTGCCTTGTCTTTCTCATCCGAC
GGATCTCTCCTGGCCGTGGGCGACTCTCGGGGTCGCATCCTTGTTTACAA
GGTCGCAGACGGTAGCCTTGTTACGGATCGTTGGACGGCGCACACCTCTC
GAATTACTTCACTTGCCTGGAACGAAGACAATGACCACCTGACCAGCGGG
TCATTGGATACCAACATCTTCGTCTGGAGCTTGTCCAAGCCCGGCGACTG
GCTTCAGGTGTCTAACGCTCACAAAGAAGGCGTGAACGGTGTTGCCTGGA
TCGCCGGGGGATCTAAGATTGCCTCAGCCGGTGCTGATGCGGCAGTTAAG
GTGTGGAAAGTGGAAGGTCTCAATTAG back to topCoding sequence (CDS) from alignment at An02:3536051..3538027+ >CBS51388_002377-T1 ID=CBS51388_002377-T1|Name=CBS51388_002377-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5517bp|location=Sequence derived from alignment at An02:3536051..3538027+ (Aspergillus niger CBS 513.88)
ATGTCTATTATAAATGAGTCCATCTGGGCTGCCAGCCCCTCCACCACCAG
GGGTCAGCCCACTCAGCTTTCTGCGGACGCCAAGGGCGAACGGATTGCAT
ATGCGGCAATCAAATCGGTTTTCCTCCGCTCGATTGACAACCCCGCCATC
GCCAGGCAGTACACCGAACATAAGACGCAGACCACTGTTGCCCGCTTCTC
ACCCTCGGGCTTCTATGTTGCCAGTGGTGATGCCAGTGGTATAGTGAGAG
TCTGGGACTGTGTTGGAGAGGGTATCACCAAGGGCGAATACAGCATTGTG
AATGGCCGGATCAATGATCTTGCCTGGGATGGCGATTCCCAGCGCATCAT
TGCCGTCGGTGATGGAAAGCAGCGCTACGGCCACTGCATTACTTGGGATA
GTGGTAATACTGTCGGAGAGATCTATGGCCACACCCAACAGATCAATTCC
GTTTCGATCAGGCAGCAAAGGCCATTGCGGGCCGCTGCTGCCGGTGACGA
CAAGAACCTAGTCTTCTACCACGGTGCACCATTCAAGTTCAACACGGGAA
TCCGGGATAAGCACACCAACTATATCTATGGAGTCGGCTTCAGCCCGGAC
GGCTCGACATTGGTCAGTGTTGGCGCGGACCGCAAGATCTGGCTGTACGA
TGGCAAGACGGGAGAAGTCAGAGGCCAGATTGGCGAAGGAGAGCACAACG
GCAGCATTTTCGGCCTTTCGTGGTCTAAGGACTCGCGGAAGTTTGCGACA
GCCAGCGCAGACAAGACTGTCAAGATTTGGGACGTGGAAGCGGGCAAGGT
TACCCAGAGTTGGAATATGGGAGAGGAAGGAGCTGCGAATGTTAAGGACC
AGCAGGTCGGAGTGGTCTGGCCTCAGGGAAGAAGCGATGGCCTGCTGATC
AGTCTTTCGTTGAGCGGCGACCTTAATTACCTAGTTGAAGGCACCCCGAA
GCCCAGACAGGTCGTCCAGGGACACCAGAAGAACATCACGTCCTTGACCC
AGTCTCGCTCTGGCAGCGATGCTGAGACCCTGTGGACTGGAAGTTTTGAC
GGCCGGGTCTGCAGCTGGGATGTTCCCACTGGGGCTGCGGAAGAAATGGA
AGGTGACAGCCACACGACCTATATTGCAGGTCTCGCGCCTACACAGGAAG
GCAATGGTCGGATCTACAGCGTCGCCTGGGACGACACCATTCGCTCCGTG
GATATAGGTGCCAAGACCTATACCGGAATCTCTTCTAAGCTGTCGGGACA
GCCCAAGGGCGTTGCAGCCGCAAATGACTTGGTGTTAGTGGGAGCGTCGG
AGAGCGTTGAGATCTACAAGGACGGACAGAAGACTGGCGACTTCAAGCCT
GATTTCCCCGTCACTGCGGTTGCGGCTCATGGCAACGTTGCAGCTGTCGG
AGGTGAAAATGCGACCGTACAGATCTTGGATATTGCGGCCTCGAGCCTTT
CCCCCAAGACTACCATCAAGGCTACGCGGAATGCGGTGTCTGCCTTGTCT
TTCTCATCCGACGGATCTCTCCTGGCCGTGGGCGACTCTCGGGGTCGCAT
CCTTGTTTACAAGGTCGCAGACGGTAGCCTTGTTACGGATCGTTGGACGG
CGCACACCTCTCGAATTACTTCACTTGCCTGGAACGAAGACAATGACCAC
CTGACCAGCGGGTCATTGGATACCAACATCTTCGTCTGGAGCTTGTCCAA
GCCCGGCGACTGGCTTCAGGTGTCTAACGCTCACAAAGAAGGCGTGAACG
GTGTTGCCTGGATCGCCGGGGGATCTAAGATTGCCTCAGCCGGTGCTGAT
GCGGCAGTTAAGGTGTGGAAAGTGGAAGGTCTCAATTAGATGTCTATTAT
AAATGAGTCCATCTGGGCTGCCAGCCCCTCCACCACCAGGGGTCAGCCCA
CTCAGCTTTCTGCGGACGCCAAGGGCGAACGGATTGCATATGCGGCAATC
AAATCGGTTTTCCTCCGCTCGATTGACAACCCCGCCATCGCCAGGCAGTA
CACCGAACATAAGACGCAGACCACTGTTGCCCGCTTCTCACCCTCGGGCT
TCTATGTTGCCAGTGGTGATGCCAGTGGTATAGTGAGAGTCTGGGACTGT
GTTGGAGAGGGTATCACCAAGGGCGAATACAGCATTGTGAATGGCCGGAT
CAATGATCTTGCCTGGGATGGCGATTCCCAGCGCATCATTGCCGTCGGTG
ATGGAAAGCAGCGCTACGGCCACTGCATTACTTGGGATAGTGGTAATACT
GTCGGAGAGATCTATGGCCACACCCAACAGATCAATTCCGTTTCGATCAG
GCAGCAAAGGCCATTGCGGGCCGCTGCTGCCGGTGACGACAAGAACCTAG
TCTTCTACCACGGTGCACCATTCAAGTTCAACACGGGAATCCGGGATAAG
CACACCAACTATATCTATGGAGTCGGCTTCAGCCCGGACGGCTCGACATT
GGTCAGTGTTGGCGCGGACCGCAAGATCTGGCTGTACGATGGCAAGACGG
GAGAAGTCAGAGGCCAGATTGGCGAAGGAGAGCACAACGGCAGCATTTTC
GGCCTTTCGTGGTCTAAGGACTCGCGGAAGTTTGCGACAGCCAGCGCAGA
CAAGACTGTCAAGATTTGGGACGTGGAAGCGGGCAAGGTTACCCAGAGTT
GGAATATGGGAGAGGAAGGAGCTGCGAATGTTAAGGACCAGCAGGTCGGA
GTGGTCTGGCCTCAGGGAAGAAGCGATGGCCTGCTGATCAGTCTTTCGTT
GAGCGGCGACCTTAATTACCTAGTTGAAGGCACCCCGAAGCCCAGACAGG
TCGTCCAGGGACACCAGAAGAACATCACGTCCTTGACCCAGTCTCGCTCT
GGCAGCGATGCTGAGACCCTGTGGACTGGAAGTTTTGACGGCCGGGTCTG
CAGCTGGGATGTTCCCACTGGGGCTGCGGAAGAAATGGAAGGTGACAGCC
ACACGACCTATATTGCAGGTCTCGCGCCTACACAGGAAGGCAATGGTCGG
ATCTACAGCGTCGCCTGGGACGACACCATTCGCTCCGTGGATATAGGTGC
CAAGACCTATACCGGAATCTCTTCTAAGCTGTCGGGACAGCCCAAGGGCG
TTGCAGCCGCAAATGACTTGGTGTTAGTGGGAGCGTCGGAGAGCGTTGAG
ATCTACAAGGACGGACAGAAGACTGGCGACTTCAAGCCTGATTTCCCCGT
CACTGCGGTTGCGGCTCATGGCAACGTTGCAGCTGTCGGAGGTGAAAATG
CGACCGTACAGATCTTGGATATTGCGGCCTCGAGCCTTTCCCCCAAGACT
ACCATCAAGGCTACGCGGAATGCGGTGTCTGCCTTGTCTTTCTCATCCGA
CGGATCTCTCCTGGCCGTGGGCGACTCTCGGGGTCGCATCCTTGTTTACA
AGGTCGCAGACGGTAGCCTTGTTACGGATCGTTGGACGGCGCACACCTCT
CGAATTACTTCACTTGCCTGGAACGAAGACAATGACCACCTGACCAGCGG
GTCATTGGATACCAACATCTTCGTCTGGAGCTTGTCCAAGCCCGGCGACT
GGCTTCAGGTGTCTAACGCTCACAAAGAAGGCGTGAACGGTGTTGCCTGG
ATCGCCGGGGGATCTAAGATTGCCTCAGCCGGTGCTGATGCGGCAGTTAA
GGTGTGGAAAGTGGAAGGTCTCAATTAGATGTCTATTATAAATGAGTCCA
TCTGGGCTGCCAGCCCCTCCACCACCAGGGGTCAGCCCACTCAGCTTTCT
GCGGACGCCAAGGGCGAACGGATTGCATATGCGGCAATCAAATCGGTTTT
CCTCCGCTCGATTGACAACCCCGCCATCGCCAGGCAGTACACCGAACATA
AGACGCAGACCACTGTTGCCCGCTTCTCACCCTCGGGCTTCTATGTTGCC
AGTGGTGATGCCAGTGGTATAGTGAGAGTCTGGGACTGTGTTGGAGAGGG
TATCACCAAGGGCGAATACAGCATTGTGAATGGCCGGATCAATGATCTTG
CCTGGGATGGCGATTCCCAGCGCATCATTGCCGTCGGTGATGGAAAGCAG
CGCTACGGCCACTGCATTACTTGGGATAGTGGTAATACTGTCGGAGAGAT
CTATGGCCACACCCAACAGATCAATTCCGTTTCGATCAGGCAGCAAAGGC
CATTGCGGGCCGCTGCTGCCGGTGACGACAAGAACCTAGTCTTCTACCAC
GGTGCACCATTCAAGTTCAACACGGGAATCCGGGATAAGCACACCAACTA
TATCTATGGAGTCGGCTTCAGCCCGGACGGCTCGACATTGGTCAGTGTTG
GCGCGGACCGCAAGATCTGGCTGTACGATGGCAAGACGGGAGAAGTCAGA
GGCCAGATTGGCGAAGGAGAGCACAACGGCAGCATTTTCGGCCTTTCGTG
GTCTAAGGACTCGCGGAAGTTTGCGACAGCCAGCGCAGACAAGACTGTCA
AGATTTGGGACGTGGAAGCGGGCAAGGTTACCCAGAGTTGGAATATGGGA
GAGGAAGGAGCTGCGAATGTTAAGGACCAGCAGGTCGGAGTGGTCTGGCC
TCAGGGAAGAAGCGATGGCCTGCTGATCAGTCTTTCGTTGAGCGGCGACC
TTAATTACCTAGTTGAAGGCACCCCGAAGCCCAGACAGGTCGTCCAGGGA
CACCAGAAGAACATCACGTCCTTGACCCAGTCTCGCTCTGGCAGCGATGC
TGAGACCCTGTGGACTGGAAGTTTTGACGGCCGGGTCTGCAGCTGGGATG
TTCCCACTGGGGCTGCGGAAGAAATGGAAGGTGACAGCCACACGACCTAT
ATTGCAGGTCTCGCGCCTACACAGGAAGGCAATGGTCGGATCTACAGCGT
CGCCTGGGACGACACCATTCGCTCCGTGGATATAGGTGCCAAGACCTATA
CCGGAATCTCTTCTAAGCTGTCGGGACAGCCCAAGGGCGTTGCAGCCGCA
AATGACTTGGTGTTAGTGGGAGCGTCGGAGAGCGTTGAGATCTACAAGGA
CGGACAGAAGACTGGCGACTTCAAGCCTGATTTCCCCGTCACTGCGGTTG
CGGCTCATGGCAACGTTGCAGCTGTCGGAGGTGAAAATGCGACCGTACAG
ATCTTGGATATTGCGGCCTCGAGCCTTTCCCCCAAGACTACCATCAAGGC
TACGCGGAATGCGGTGTCTGCCTTGTCTTTCTCATCCGACGGATCTCTCC
TGGCCGTGGGCGACTCTCGGGGTCGCATCCTTGTTTACAAGGTCGCAGAC
GGTAGCCTTGTTACGGATCGTTGGACGGCGCACACCTCTCGAATTACTTC
ACTTGCCTGGAACGAAGACAATGACCACCTGACCAGCGGGTCATTGGATA
CCAACATCTTCGTCTGGAGCTTGTCCAAGCCCGGCGACTGGCTTCAGGTG
TCTAACGCTCACAAAGAAGGCGTGAACGGTGTTGCCTGGATCGCCGGGGG
ATCTAAGATTGCCTCAGCCGGTGCTGATGCGGCAGTTAAGGTGTGGAAAG
TGGAAGGTCTCAATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092619L1 |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR024977 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF12894 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:3536051..3538027 + |
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