|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:78510..79461+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002437-T1 ID=CBS51388_002437-T1|Name=CBS51388_002437-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=952bp|location=Sequence derived from alignment at An03:78510..79461+ (Aspergillus niger CBS 513.88)
ATGGCGAACCGCGAAACGTTTGCGCTCATCACCGGGTGTAGCAGTGGCAT
TGGCAAAGAACTTGCAGTGGCCTTTGCGAACAGAGGAGTCACCGTACTGG
GCACAGCACGCCGCACGCAGTCACTCGACGAACTCACGAGCAAATACAGC
AACATCAAAGCTCTAGCGCTTGACTTGAGTGACCCAGAAATCATTACAAA
GCTAAAGGATAGTGTCTTGGATTACACAGACGGATACTTGGACTACCTGG
TCAATAATGCGGGGACGCACTACGCCGGGACAGCGATGGACCTAGAGATG
GATGAGGTGGTCGCTATCTTTCAAGTGAACGTGTTTGCCGTCATGCGCCT
GTGCCAGATTTTCCTGCCTCTTCTCCGCCAGTCGCCACGAGGGCGTATTG
TGCAGATTGAGAGTGTCACGTGGAATATCCCGGTTGTGTGGCAGGGCGCA
TACAATGCTTCTAAGGCGGCGCTCAGCCAATATTCACGGACACTTCGTCT
GGTGAGCACACGTTCCGTTGTGGATTACTTGGAAGCCATCATGCTAAAAT
TTCATAGAGGTGAAACCATTGGGGGTCGAGGTGATCGAAATCGTCACGGG
ATTTGTGCAGAGCAACATCCTGCACCACGGCCTCCACGCGCCCGAGGACT
CGGTGTATCTACCCATCAAAGGCATTATTGAAAACATCAAGTATCAGGGC
AACGCGAATGGAATGCCGGCGCACGTGTATGCGGCGTCGATCACCGACAA
GCTGCTGCGACGACAGGTCGATCCGGAAATCTGGGAGGGGAAGATGGCGC
GTCTGCTGCGCTTGATTTTCATGTTGCCTTTGCGGCTGCTGGTAGGCCAT
CCGTCTGAAACTTACCTGGACAAACGACTGATTGTTCCTCAGAATCATCT
CCTGTACCGCAGATTCAAGCTGGGCTCGTTGAGGGAATCAATTGGTCGGT
GA back to topCoding sequence (CDS) from alignment at An03:78510..79461+ >CBS51388_002437-T1 ID=CBS51388_002437-T1|Name=CBS51388_002437-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1788bp|location=Sequence derived from alignment at An03:78510..79461+ (Aspergillus niger CBS 513.88)
ATGGCGAACCGCGAAACGTTTGCGCTCATCACCGGGTGTAGCAGTGGCAT
TGGCAAAGAACTTGCAGTGGCCTTTGCGAACAGAGGAGTCACCGTACTGG
GCACAGCACGCCGCACGCAGTCACTCGACGAACTCACGAGCAAATACAGC
AACATCAAAGCTCTAGCGCTTGACTTGAGTGACCCAGAAATCATTACAAA
GCTAAAGGATAGTGTCTTGGATTACACAGACGGATACTTGGACTACCTGG
TCAATAATGCGGGGACGCACTACGCCGGGACAGCGATGGACCTAGAGATG
GATGAGGTGGTCGCTATCTTTCAAGTGAACGTGTTTGCCGTCATGCGCCT
GTGCCAGATTTTCCTGCCTCTTCTCCGCCAGTCGCCACGAGGGCGTATTG
TGCAGATTGAGAGTGTCACGTGGAATATCCCGGTTGTGTGGCAGGGCGCA
TACAATGCTTCTAAGGCGGCGCTCAGCCAATATTCACGGACACTTCGTCT
GGTGAAACCATTGGGGGTCGAGGTGATCGAAATCGTCACGGGATTTGTGC
AGAGCAACATCCTGCACCACGGCCTCCACGCGCCCGAGGACTCGGTGTAT
CTACCCATCAAAGGCATTATTGAAAACATCAAGTATCAGGGCAACGCGAA
TGGAATGCCGGCGCACGTGTATGCGGCGTCGATCACCGACAAGCTGCTGC
GACGACAGGTCGATCCGGAAATCTGGGAGGGGAAGATGGCGCGTCTGCTG
CGCTTGATTTTCATGTTGCCTTTGCGGCTGCTGGTAGGCCATCCGTCTGA
AACTTACCTGGACAAACGACTGATTGTTCCTCAGAATCATCTCCTGTACC
GCAGATTCAAGCTGGGCTCGTTGAGGGAATCAATTGGTCGGTGAATGGCG
AACCGCGAAACGTTTGCGCTCATCACCGGGTGTAGCAGTGGCATTGGCAA
AGAACTTGCAGTGGCCTTTGCGAACAGAGGAGTCACCGTACTGGGCACAG
CACGCCGCACGCAGTCACTCGACGAACTCACGAGCAAATACAGCAACATC
AAAGCTCTAGCGCTTGACTTGAGTGACCCAGAAATCATTACAAAGCTAAA
GGATAGTGTCTTGGATTACACAGACGGATACTTGGACTACCTGGTCAATA
ATGCGGGGACGCACTACGCCGGGACAGCGATGGACCTAGAGATGGATGAG
GTGGTCGCTATCTTTCAAGTGAACGTGTTTGCCGTCATGCGCCTGTGCCA
GATTTTCCTGCCTCTTCTCCGCCAGTCGCCACGAGGGCGTATTGTGCAGA
TTGAGAGTGTCACGTGGAATATCCCGGTTGTGTGGCAGGGCGCATACAAT
GCTTCTAAGGCGGCGCTCAGCCAATATTCACGGACACTTCGTCTGGTGAA
ACCATTGGGGGTCGAGGTGATCGAAATCGTCACGGGATTTGTGCAGAGCA
ACATCCTGCACCACGGCCTCCACGCGCCCGAGGACTCGGTGTATCTACCC
ATCAAAGGCATTATTGAAAACATCAAGTATCAGGGCAACGCGAATGGAAT
GCCGGCGCACGTGTATGCGGCGTCGATCACCGACAAGCTGCTGCGACGAC
AGGTCGATCCGGAAATCTGGGAGGGGAAGATGGCGCGTCTGCTGCGCTTG
ATTTTCATGTTGCCTTTGCGGCTGCTGGTAGGCCATCCGTCTGAAACTTA
CCTGGACAAACGACTGATTGTTCCTCAGAATCATCTCCTGTACCGCAGAT
TCAAGCTGGGCTCGTTGAGGGAATCAATTGGTCGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:78510..79461 + |
|
