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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:423387..425233- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002569-T1 ID=CBS51388_002569-T1|Name=CBS51388_002569-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1847bp|location=Sequence derived from alignment at An03:423387..425233- (Aspergillus niger CBS 513.88)
ATGCCTCGTAAGAGGCCGCAAGATGAACTCAATGGTGATGTGCTGCAGCA
AGAGGCGCAAGCTACCGGCCCCAATGACCAGAAATCTGAAGAGGGGATTG
TGGATACACCTATCCCTCTGCTCACGTGGCGTTCTTTCTTAATGGGCATT
TTCGTGTCAATGGGTGGTTTCCTCTTCGGCTACGACACTGGCCAAATTTC
AGGCTTCTTGGAGATGCCGAACTTTCTCCAAAGATACGGACAACAGCAAG
CTGACGGAACATACTATTTCTCCAATGCCCGTTCGGGTCTGATTGTCGCG
CTGGTAAGATACGCATGGACAGCTTGACACTAGATCAATCTTGCTGATAA
GCGCAGCTATCAATCGGTACCTTGATTGGCGCCCTTATTGCAGCTCCCAT
CGCAGATCGCGTTGGCCGGAAATGGTCCATCAGCGGCTGGAGTGCCATGG
TGTGTGTCGGTATCACCATACAAATATCTTCCCCTTTCGGAAAGTGGTAC
CAGGTGGCCATGGGTCGTTGGGTCGCTGGTCTCGGCGTTGGGGCTCTATC
ATTGCTTGTTCCCATGTACCAAGCAGAAACTGGACCAAGGCACATTCGTG
GATCTCTTGTTAGGTATGCCTACAAACCTGTACTGTTCTTGATTGGAAGC
TAACGTCAACAGCACTTATCAGCTTTTCATCACCCTTGGAATCTTCGTCG
CCAATTGTATCAACTTCGGAACAGAAGCTCGAAATGATACAGGCTCCTGG
CGTATTCCCATGGGCATCACCTACATTTGGGCCATGATCCTGGGCTTCGG
AATTGCACTATTCCCCGAAAGTGCCCGGTACGACTATAGACATGGAAGGG
AGGCGAAAGCAGCTCGTACCCTATCGAGAATGTACGGGATTCCTGAAAAC
CACCGTATGCTGAAGCTCGAGATCGGCGAGATCAGGCAGAAGTTCGTGGA
AGAACAGGAACGCGGAGAGATAACCTGGTCTCATCTTTTACATGCACCCC
GCATGAAGTATCGCGTCGCAGTGGGAGTCGCCCTTCAAGCACTGCAACAA
TTAACGGGAGCGAATTACTTTTTCTACTACGGGACGACGATCTTTCGAGG
CGCCGGGATTTCAAATTCCTACGTAACACAAATGATTCTTGGCGGTGTGA
ATTTCGGAACGACATTCCTAGGGCTGTACCTGATCGAGAACTACGGTCGT
CGCCGATCCCTGATAACAGGAGCATTGTGGATGTTTGTTTGTTTCATGGT
TTTCGCCTCGGTGGGCCATTTCTCTCTAGACCATGAAAACCCAGAACGGA
CACACACAGCTGGTGTGGTCATGGTTGTTTTCGCCTGCCTTTTCATTCTC
GGTATGTCAGCCGTTGCACGTCCCCATTCTAATCCAAATACGTAGTCCCA
CTTGCTAACCGCCACAAAGGTTTCGCATCAACATGGGGTCCCATGGTGTG
GACCATTATCGCAGAGCTGTATCCCTCCGAATTCCGTGCCCGCGCCATGT
CTCTCGCCACAGCATCCAATTGGCTCTGGAACTTCCTTCTCGCCTTTTTC
ACCCCCTTCATCACCAGTGCCATTGACTTCCGCCTCGGCTACGTCTTTGC
CGGCTGCCTCTTCCTTGCGGCGGGCCTGGTTTACGTGGCAGTCATCGAAG
GTCGTGGCCGTACATTGGAAGAGATCGATACCATGTACGTTATGAAGGTG
CCGCCCTGGAAGAGCTCCAAGTATGTATTTCCGGACATCGATCCATATGA
TCGTCGCGGTTCGATTTTATCGAAAGCAGGGGCTTCTCATATTCCCCAGG
TGAGCGGTGGAAACGAGACTCTCAGCCCCCACACAACTGAGGTGTAA back to topCoding sequence (CDS) from alignment at An03:423387..425233- >CBS51388_002569-T1 ID=CBS51388_002569-T1|Name=CBS51388_002569-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6708bp|location=Sequence derived from alignment at An03:423387..425233- (Aspergillus niger CBS 513.88)
GTTTCGCATCAACATGGGGTCCCATGGTGTGGACCATTATCGCAGAGCTG
TATCCCTCCGAATTCCGTGCCCGCGCCATGTCTCTCGCCACAGCATCCAA
TTGGCTCTGGAACTTCCTTCTCGCCTTTTTCACCCCCTTCATCACCAGTG
CCATTGACTTCCGCCTCGGCTACGTCTTTGCCGGCTGCCTCTTCCTTGCG
GCGGGCCTGGTTTACGTGGCAGTCATCGAAGGTCGTGGCCGTACATTGGA
AGAGATCGATACCATGTACGTTATGAAGGTGCCGCCCTGGAAGAGCTCCA
AGTATGTATTTCCGGACATCGATCCATATGATCGTCGCGGTTCGATTTTA
TCGAAAGCAGGGGCTTCTCATATTCCCCAGGTGAGCGGTGGAAACGAGAC
TCTCAGCCCCCACACAACTGAGGTGTAACACTTATCAGCTTTTCATCACC
CTTGGAATCTTCGTCGCCAATTGTATCAACTTCGGAACAGAAGCTCGAAA
TGATACAGGCTCCTGGCGTATTCCCATGGGCATCACCTACATTTGGGCCA
TGATCCTGGGCTTCGGAATTGCACTATTCCCCGAAAGTGCCCGGTACGAC
TATAGACATGGAAGGGAGGCGAAAGCAGCTCGTACCCTATCGAGAATGTA
CGGGATTCCTGAAAACCACCGTATGCTGAAGCTCGAGATCGGCGAGATCA
GGCAGAAGTTCGTGGAAGAACAGGAACGCGGAGAGATAACCTGGTCTCAT
CTTTTACATGCACCCCGCATGAAGTATCGCGTCGCAGTGGGAGTCGCCCT
TCAAGCACTGCAACAATTAACGGGAGCGAATTACTTTTTCTACTACGGGA
CGACGATCTTTCGAGGCGCCGGGATTTCAAATTCCTACGTAACACAAATG
ATTCTTGGCGGTGTGAATTTCGGAACGACATTCCTAGGGCTGTACCTGAT
CGAGAACTACGGTCGTCGCCGATCCCTGATAACAGGAGCATTGTGGATGT
TTGTTTGTTTCATGGTTTTCGCCTCGGTGGGCCATTTCTCTCTAGACCAT
GAAAACCCAGAACGGACACACACAGCTGGTGTGGTCATGGTTGTTTTCGC
CTGCCTTTTCATTCTCGCTATCAATCGGTACCTTGATTGGCGCCCTTATT
GCAGCTCCCATCGCAGATCGCGTTGGCCGGAAATGGTCCATCAGCGGCTG
GAGTGCCATGGTGTGTGTCGGTATCACCATACAAATATCTTCCCCTTTCG
GAAAGTGGTACCAGGTGGCCATGGGTCGTTGGGTCGCTGGTCTCGGCGTT
GGGGCTCTATCATTGCTTGTTCCCATGTACCAAGCAGAAACTGGACCAAG
GCACATTCGTGGATCTCTTGTTAGATGCCTCGTAAGAGGCCGCAAGATGA
ACTCAATGGTGATGTGCTGCAGCAAGAGGCGCAAGCTACCGGCCCCAATG
ACCAGAAATCTGAAGAGGGGATTGTGGATACACCTATCCCTCTGCTCACG
TGGCGTTCTTTCTTAATGGGCATTTTCGTGTCAATGGGTGGTTTCCTCTT
CGGCTACGACACTGGCCAAATTTCAGGCTTCTTGGAGATGCCGAACTTTC
TCCAAAGATACGGACAACAGCAAGCTGACGGAACATACTATTTCTCCAAT
GCCCGTTCGGGTCTGATTGTCGCGCTGGTTTCGCATCAACATGGGGTCCC
ATGGTGTGGACCATTATCGCAGAGCTGTATCCCTCCGAATTCCGTGCCCG
CGCCATGTCTCTCGCCACAGCATCCAATTGGCTCTGGAACTTCCTTCTCG
CCTTTTTCACCCCCTTCATCACCAGTGCCATTGACTTCCGCCTCGGCTAC
GTCTTTGCCGGCTGCCTCTTCCTTGCGGCGGGCCTGGTTTACGTGGCAGT
CATCGAAGGTCGTGGCCGTACATTGGAAGAGATCGATACCATGTACGTTA
TGAAGGTGCCGCCCTGGAAGAGCTCCAAGTATGTATTTCCGGACATCGAT
CCATATGATCGTCGCGGTTCGATTTTATCGAAAGCAGGGGCTTCTCATAT
TCCCCAGGTGAGCGGTGGAAACGAGACTCTCAGCCCCCACACAACTGAGG
TGTAACACTTATCAGCTTTTCATCACCCTTGGAATCTTCGTCGCCAATTG
TATCAACTTCGGAACAGAAGCTCGAAATGATACAGGCTCCTGGCGTATTC
CCATGGGCATCACCTACATTTGGGCCATGATCCTGGGCTTCGGAATTGCA
CTATTCCCCGAAAGTGCCCGGTACGACTATAGACATGGAAGGGAGGCGAA
AGCAGCTCGTACCCTATCGAGAATGTACGGGATTCCTGAAAACCACCGTA
TGCTGAAGCTCGAGATCGGCGAGATCAGGCAGAAGTTCGTGGAAGAACAG
GAACGCGGAGAGATAACCTGGTCTCATCTTTTACATGCACCCCGCATGAA
GTATCGCGTCGCAGTGGGAGTCGCCCTTCAAGCACTGCAACAATTAACGG
GAGCGAATTACTTTTTCTACTACGGGACGACGATCTTTCGAGGCGCCGGG
ATTTCAAATTCCTACGTAACACAAATGATTCTTGGCGGTGTGAATTTCGG
AACGACATTCCTAGGGCTGTACCTGATCGAGAACTACGGTCGTCGCCGAT
CCCTGATAACAGGAGCATTGTGGATGTTTGTTTGTTTCATGGTTTTCGCC
TCGGTGGGCCATTTCTCTCTAGACCATGAAAACCCAGAACGGACACACAC
AGCTGGTGTGGTCATGGTTGTTTTCGCCTGCCTTTTCATTCTCGCTATCA
ATCGGTACCTTGATTGGCGCCCTTATTGCAGCTCCCATCGCAGATCGCGT
TGGCCGGAAATGGTCCATCAGCGGCTGGAGTGCCATGGTGTGTGTCGGTA
TCACCATACAAATATCTTCCCCTTTCGGAAAGTGGTACCAGGTGGCCATG
GGTCGTTGGGTCGCTGGTCTCGGCGTTGGGGCTCTATCATTGCTTGTTCC
CATGTACCAAGCAGAAACTGGACCAAGGCACATTCGTGGATCTCTTGTTA
GATGCCTCGTAAGAGGCCGCAAGATGAACTCAATGGTGATGTGCTGCAGC
AAGAGGCGCAAGCTACCGGCCCCAATGACCAGAAATCTGAAGAGGGGATT
GTGGATACACCTATCCCTCTGCTCACGTGGCGTTCTTTCTTAATGGGCAT
TTTCGTGTCAATGGGTGGTTTCCTCTTCGGCTACGACACTGGCCAAATTT
CAGGCTTCTTGGAGATGCCGAACTTTCTCCAAAGATACGGACAACAGCAA
GCTGACGGAACATACTATTTCTCCAATGCCCGTTCGGGTCTGATTGTCGC
GCTGGTTTCGCATCAACATGGGGTCCCATGGTGTGGACCATTATCGCAGA
GCTGTATCCCTCCGAATTCCGTGCCCGCGCCATGTCTCTCGCCACAGCAT
CCAATTGGCTCTGGAACTTCCTTCTCGCCTTTTTCACCCCCTTCATCACC
AGTGCCATTGACTTCCGCCTCGGCTACGTCTTTGCCGGCTGCCTCTTCCT
TGCGGCGGGCCTGGTTTACGTGGCAGTCATCGAAGGTCGTGGCCGTACAT
TGGAAGAGATCGATACCATGTACGTTATGAAGGTGCCGCCCTGGAAGAGC
TCCAAGTATGTATTTCCGGACATCGATCCATATGATCGTCGCGGTTCGAT
TTTATCGAAAGCAGGGGCTTCTCATATTCCCCAGGTGAGCGGTGGAAACG
AGACTCTCAGCCCCCACACAACTGAGGTGTAACACTTATCAGCTTTTCAT
CACCCTTGGAATCTTCGTCGCCAATTGTATCAACTTCGGAACAGAAGCTC
GAAATGATACAGGCTCCTGGCGTATTCCCATGGGCATCACCTACATTTGG
GCCATGATCCTGGGCTTCGGAATTGCACTATTCCCCGAAAGTGCCCGGTA
CGACTATAGACATGGAAGGGAGGCGAAAGCAGCTCGTACCCTATCGAGAA
TGTACGGGATTCCTGAAAACCACCGTATGCTGAAGCTCGAGATCGGCGAG
ATCAGGCAGAAGTTCGTGGAAGAACAGGAACGCGGAGAGATAACCTGGTC
TCATCTTTTACATGCACCCCGCATGAAGTATCGCGTCGCAGTGGGAGTCG
CCCTTCAAGCACTGCAACAATTAACGGGAGCGAATTACTTTTTCTACTAC
GGGACGACGATCTTTCGAGGCGCCGGGATTTCAAATTCCTACGTAACACA
AATGATTCTTGGCGGTGTGAATTTCGGAACGACATTCCTAGGGCTGTACC
TGATCGAGAACTACGGTCGTCGCCGATCCCTGATAACAGGAGCATTGTGG
ATGTTTGTTTGTTTCATGGTTTTCGCCTCGGTGGGCCATTTCTCTCTAGA
CCATGAAAACCCAGAACGGACACACACAGCTGGTGTGGTCATGGTTGTTT
TCGCCTGCCTTTTCATTCTCGCTATCAATCGGTACCTTGATTGGCGCCCT
TATTGCAGCTCCCATCGCAGATCGCGTTGGCCGGAAATGGTCCATCAGCG
GCTGGAGTGCCATGGTGTGTGTCGGTATCACCATACAAATATCTTCCCCT
TTCGGAAAGTGGTACCAGGTGGCCATGGGTCGTTGGGTCGCTGGTCTCGG
CGTTGGGGCTCTATCATTGCTTGTTCCCATGTACCAAGCAGAAACTGGAC
CAAGGCACATTCGTGGATCTCTTGTTAGATGCCTCGTAAGAGGCCGCAAG
ATGAACTCAATGGTGATGTGCTGCAGCAAGAGGCGCAAGCTACCGGCCCC
AATGACCAGAAATCTGAAGAGGGGATTGTGGATACACCTATCCCTCTGCT
CACGTGGCGTTCTTTCTTAATGGGCATTTTCGTGTCAATGGGTGGTTTCC
TCTTCGGCTACGACACTGGCCAAATTTCAGGCTTCTTGGAGATGCCGAAC
TTTCTCCAAAGATACGGACAACAGCAAGCTGACGGAACATACTATTTCTC
CAATGCCCGTTCGGGTCTGATTGTCGCGCTGGTTTCGCATCAACATGGGG
TCCCATGGTGTGGACCATTATCGCAGAGCTGTATCCCTCCGAATTCCGTG
CCCGCGCCATGTCTCTCGCCACAGCATCCAATTGGCTCTGGAACTTCCTT
CTCGCCTTTTTCACCCCCTTCATCACCAGTGCCATTGACTTCCGCCTCGG
CTACGTCTTTGCCGGCTGCCTCTTCCTTGCGGCGGGCCTGGTTTACGTGG
CAGTCATCGAAGGTCGTGGCCGTACATTGGAAGAGATCGATACCATGTAC
GTTATGAAGGTGCCGCCCTGGAAGAGCTCCAAGTATGTATTTCCGGACAT
CGATCCATATGATCGTCGCGGTTCGATTTTATCGAAAGCAGGGGCTTCTC
ATATTCCCCAGGTGAGCGGTGGAAACGAGACTCTCAGCCCCCACACAACT
GAGGTGTAACACTTATCAGCTTTTCATCACCCTTGGAATCTTCGTCGCCA
ATTGTATCAACTTCGGAACAGAAGCTCGAAATGATACAGGCTCCTGGCGT
ATTCCCATGGGCATCACCTACATTTGGGCCATGATCCTGGGCTTCGGAAT
TGCACTATTCCCCGAAAGTGCCCGGTACGACTATAGACATGGAAGGGAGG
CGAAAGCAGCTCGTACCCTATCGAGAATGTACGGGATTCCTGAAAACCAC
CGTATGCTGAAGCTCGAGATCGGCGAGATCAGGCAGAAGTTCGTGGAAGA
ACAGGAACGCGGAGAGATAACCTGGTCTCATCTTTTACATGCACCCCGCA
TGAAGTATCGCGTCGCAGTGGGAGTCGCCCTTCAAGCACTGCAACAATTA
ACGGGAGCGAATTACTTTTTCTACTACGGGACGACGATCTTTCGAGGCGC
CGGGATTTCAAATTCCTACGTAACACAAATGATTCTTGGCGGTGTGAATT
TCGGAACGACATTCCTAGGGCTGTACCTGATCGAGAACTACGGTCGTCGC
CGATCCCTGATAACAGGAGCATTGTGGATGTTTGTTTGTTTCATGGTTTT
CGCCTCGGTGGGCCATTTCTCTCTAGACCATGAAAACCCAGAACGGACAC
ACACAGCTGGTGTGGTCATGGTTGTTTTCGCCTGCCTTTTCATTCTCGCT
ATCAATCGGTACCTTGATTGGCGCCCTTATTGCAGCTCCCATCGCAGATC
GCGTTGGCCGGAAATGGTCCATCAGCGGCTGGAGTGCCATGGTGTGTGTC
GGTATCACCATACAAATATCTTCCCCTTTCGGAAAGTGGTACCAGGTGGC
CATGGGTCGTTGGGTCGCTGGTCTCGGCGTTGGGGCTCTATCATTGCTTG
TTCCCATGTACCAAGCAGAAACTGGACCAAGGCACATTCGTGGATCTCTT
GTTAGATGCCTCGTAAGAGGCCGCAAGATGAACTCAATGGTGATGTGCTG
CAGCAAGAGGCGCAAGCTACCGGCCCCAATGACCAGAAATCTGAAGAGGG
GATTGTGGATACACCTATCCCTCTGCTCACGTGGCGTTCTTTCTTAATGG
GCATTTTCGTGTCAATGGGTGGTTTCCTCTTCGGCTACGACACTGGCCAA
ATTTCAGGCTTCTTGGAGATGCCGAACTTTCTCCAAAGATACGGACAACA
GCAAGCTGACGGAACATACTATTTCTCCAATGCCCGTTCGGGTCTGATTG
TCGCGCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:423387..425233 - |
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