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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:558450..559722- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002625-T1 ID=CBS51388_002625-T1|Name=CBS51388_002625-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1273bp|location=Sequence derived from alignment at An03:558450..559722- (Aspergillus niger CBS 513.88)
ATGGTTGTTGCAGGATCGAATCTGCGGGATGATGAGTGCAAGGGTCTATT
GACTTCAGTGACTTGCACTCCTGCAAGCCCACCACCACCACCATCGGACG
ATGTGAAGCTTGAGTTGGGATACTATTCGTACGAGGACGAAAAGAGACCT
GAAGTGTTGTCTGAGGAGCCGGAAAAGCAGATAGGGAGTGTTCGACTTCT
TGTATGGATGACAATCAATATTGTTGCGACTGTTGCCATCGTATGTTCCT
ATCATGCTGAACTTGAACATGAATAATAGTCACTGACAAACACGCAGGTA
TTCACCAACAAATCCATCCTCTCCAATGCATCTTTCCGCAACTCGCAAGT
ATCCTTCGCCGCCTATCATTTCACCATCACCGGGCTCACACTATGGCTGG
CATCGCGGCCATGCTGCGGCTGGTTCGAACCCAAGCACGTATCGCCCTAC
CGCATCCTCCACCTCGTCGCGGCTATGTGCATCCAGGTCATCTTTCAGAA
CCTGGCACTGGCTTATTCGTCGGTGATCTTTCACCAGCTGGCGCGGTTGC
TCCTTACGCCTGCTACGGCGTTGTTGAATTTTGCGCTGTTCCAGTCCAGC
ATCCCCAGAGCGGCGTTCCTTCCCCTGGTCCTACTGTGCACGGGAGTTGG
AATTGTCTCCTACTTTGATTCGCTCCCGTCCGCGAAAGGCAACGATACCA
CGACACCAGAGGGTATTTTCTTCGCTTTGTCTGGTGTGTGCGCTAGTGCA
CTGTACACGGTCCTGGTGGGCCGGTATCATAAGAAGCTGGAGATGAGCAG
TATGCAGCTTCTACTTAATCAGGCCCCTGTCAGTGCTGCTGTCCTATTGT
GTGTTGTTCCATGGATGGAGACGTTTCCGGAGGTTGCGGCTGTCCCTGGG
TCGTTGTGGACTTCGATACTTGCGGTAAGCTGACTTTTATGTGCTTTTTG
TCTGACAATCGATTAAGATAGAAAAGTGGCTGATGTATGCTTTGCAGAGT
GGAATATTCGCTTGTCTGGTGAACCTATCTCAGTTCTATATTATTGATGC
TGCCGGGCCGGTTACGAGCACGGTGATCGGACAGCTCAAGACCTGCGTCA
TTGTAGGGTTGGGATGGGTGCTGAGTGACCATGAGATTCTGCGGCAGAGT
GTCGCGGGTATTTTGATGGCTTTGACGGGGATGAGCTTGTGAGTTACCTT
GTCTTTATGGTTGATTCTGATATGACTGACGTTCTGTAGGTACATGAAGA
TAATTCTAAGGCATCAATCATGA back to topCoding sequence (CDS) from alignment at An03:558450..559722- >CBS51388_002625-T1 ID=CBS51388_002625-T1|Name=CBS51388_002625-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4368bp|location=Sequence derived from alignment at An03:558450..559722- (Aspergillus niger CBS 513.88)
GTACATGAAGATAATTCTAAGGCATCAATCATGAAGTGGAATATTCGCTT
GTCTGGTGAACCTATCTCAGTTCTATATTATTGATGCTGCCGGGCCGGTT
ACGAGCACGGTGATCGGACAGCTCAAGACCTGCGTCATTGTAGGGTTGGG
ATGGGTGCTGAGTGACCATGAGATTCTGCGGCAGAGTGTCGCGGGTATTT
TGATGGCTTTGACGGGGATGAGCTTGTATTCACCAACAAATCCATCCTCT
CCAATGCATCTTTCCGCAACTCGCAAGTATCCTTCGCCGCCTATCATTTC
ACCATCACCGGGCTCACACTATGGCTGGCATCGCGGCCATGCTGCGGCTG
GTTCGAACCCAAGCACGTATCGCCCTACCGCATCCTCCACCTCGTCGCGG
CTATGTGCATCCAGGTCATCTTTCAGAACCTGGCACTGGCTTATTCGTCG
GTGATCTTTCACCAGCTGGCGCGGTTGCTCCTTACGCCTGCTACGGCGTT
GTTGAATTTTGCGCTGTTCCAGTCCAGCATCCCCAGAGCGGCGTTCCTTC
CCCTGGTCCTACTGTGCACGGGAGTTGGAATTGTCTCCTACTTTGATTCG
CTCCCGTCCGCGAAAGGCAACGATACCACGACACCAGAGGGTATTTTCTT
CGCTTTGTCTGGTGTGTGCGCTAGTGCACTGTACACGGTCCTGGTGGGCC
GGTATCATAAGAAGCTGGAGATGAGCAGTATGCAGCTTCTACTTAATCAG
GCCCCTGTCAGTGCTGCTGTCCTATTGTGTGTTGTTCCATGGATGGAGAC
GTTTCCGGAGGTTGCGGCTGTCCCTGGGTCGTTGTGGACTTCGATACTTG
CGATGGTTGTTGCAGGATCGAATCTGCGGGATGATGAGTGCAAGGGTCTA
TTGACTTCAGTGACTTGCACTCCTGCAAGCCCACCACCACCACCATCGGA
CGATGTGAAGCTTGAGTTGGGATACTATTCGTACGAGGACGAAAAGAGAC
CTGAAGTGTTGTCTGAGGAGCCGGAAAAGCAGATAGGGAGTGTTCGACTT
CTTGTATGGATGACAATCAATATTGTTGCGACTGTTGCCATCGTACATGA
AGATAATTCTAAGGCATCAATCATGAAGTGGAATATTCGCTTGTCTGGTG
AACCTATCTCAGTTCTATATTATTGATGCTGCCGGGCCGGTTACGAGCAC
GGTGATCGGACAGCTCAAGACCTGCGTCATTGTAGGGTTGGGATGGGTGC
TGAGTGACCATGAGATTCTGCGGCAGAGTGTCGCGGGTATTTTGATGGCT
TTGACGGGGATGAGCTTGTATTCACCAACAAATCCATCCTCTCCAATGCA
TCTTTCCGCAACTCGCAAGTATCCTTCGCCGCCTATCATTTCACCATCAC
CGGGCTCACACTATGGCTGGCATCGCGGCCATGCTGCGGCTGGTTCGAAC
CCAAGCACGTATCGCCCTACCGCATCCTCCACCTCGTCGCGGCTATGTGC
ATCCAGGTCATCTTTCAGAACCTGGCACTGGCTTATTCGTCGGTGATCTT
TCACCAGCTGGCGCGGTTGCTCCTTACGCCTGCTACGGCGTTGTTGAATT
TTGCGCTGTTCCAGTCCAGCATCCCCAGAGCGGCGTTCCTTCCCCTGGTC
CTACTGTGCACGGGAGTTGGAATTGTCTCCTACTTTGATTCGCTCCCGTC
CGCGAAAGGCAACGATACCACGACACCAGAGGGTATTTTCTTCGCTTTGT
CTGGTGTGTGCGCTAGTGCACTGTACACGGTCCTGGTGGGCCGGTATCAT
AAGAAGCTGGAGATGAGCAGTATGCAGCTTCTACTTAATCAGGCCCCTGT
CAGTGCTGCTGTCCTATTGTGTGTTGTTCCATGGATGGAGACGTTTCCGG
AGGTTGCGGCTGTCCCTGGGTCGTTGTGGACTTCGATACTTGCGATGGTT
GTTGCAGGATCGAATCTGCGGGATGATGAGTGCAAGGGTCTATTGACTTC
AGTGACTTGCACTCCTGCAAGCCCACCACCACCACCATCGGACGATGTGA
AGCTTGAGTTGGGATACTATTCGTACGAGGACGAAAAGAGACCTGAAGTG
TTGTCTGAGGAGCCGGAAAAGCAGATAGGGAGTGTTCGACTTCTTGTATG
GATGACAATCAATATTGTTGCGACTGTTGCCATCGTACATGAAGATAATT
CTAAGGCATCAATCATGAAGTGGAATATTCGCTTGTCTGGTGAACCTATC
TCAGTTCTATATTATTGATGCTGCCGGGCCGGTTACGAGCACGGTGATCG
GACAGCTCAAGACCTGCGTCATTGTAGGGTTGGGATGGGTGCTGAGTGAC
CATGAGATTCTGCGGCAGAGTGTCGCGGGTATTTTGATGGCTTTGACGGG
GATGAGCTTGTATTCACCAACAAATCCATCCTCTCCAATGCATCTTTCCG
CAACTCGCAAGTATCCTTCGCCGCCTATCATTTCACCATCACCGGGCTCA
CACTATGGCTGGCATCGCGGCCATGCTGCGGCTGGTTCGAACCCAAGCAC
GTATCGCCCTACCGCATCCTCCACCTCGTCGCGGCTATGTGCATCCAGGT
CATCTTTCAGAACCTGGCACTGGCTTATTCGTCGGTGATCTTTCACCAGC
TGGCGCGGTTGCTCCTTACGCCTGCTACGGCGTTGTTGAATTTTGCGCTG
TTCCAGTCCAGCATCCCCAGAGCGGCGTTCCTTCCCCTGGTCCTACTGTG
CACGGGAGTTGGAATTGTCTCCTACTTTGATTCGCTCCCGTCCGCGAAAG
GCAACGATACCACGACACCAGAGGGTATTTTCTTCGCTTTGTCTGGTGTG
TGCGCTAGTGCACTGTACACGGTCCTGGTGGGCCGGTATCATAAGAAGCT
GGAGATGAGCAGTATGCAGCTTCTACTTAATCAGGCCCCTGTCAGTGCTG
CTGTCCTATTGTGTGTTGTTCCATGGATGGAGACGTTTCCGGAGGTTGCG
GCTGTCCCTGGGTCGTTGTGGACTTCGATACTTGCGATGGTTGTTGCAGG
ATCGAATCTGCGGGATGATGAGTGCAAGGGTCTATTGACTTCAGTGACTT
GCACTCCTGCAAGCCCACCACCACCACCATCGGACGATGTGAAGCTTGAG
TTGGGATACTATTCGTACGAGGACGAAAAGAGACCTGAAGTGTTGTCTGA
GGAGCCGGAAAAGCAGATAGGGAGTGTTCGACTTCTTGTATGGATGACAA
TCAATATTGTTGCGACTGTTGCCATCGTACATGAAGATAATTCTAAGGCA
TCAATCATGAAGTGGAATATTCGCTTGTCTGGTGAACCTATCTCAGTTCT
ATATTATTGATGCTGCCGGGCCGGTTACGAGCACGGTGATCGGACAGCTC
AAGACCTGCGTCATTGTAGGGTTGGGATGGGTGCTGAGTGACCATGAGAT
TCTGCGGCAGAGTGTCGCGGGTATTTTGATGGCTTTGACGGGGATGAGCT
TGTATTCACCAACAAATCCATCCTCTCCAATGCATCTTTCCGCAACTCGC
AAGTATCCTTCGCCGCCTATCATTTCACCATCACCGGGCTCACACTATGG
CTGGCATCGCGGCCATGCTGCGGCTGGTTCGAACCCAAGCACGTATCGCC
CTACCGCATCCTCCACCTCGTCGCGGCTATGTGCATCCAGGTCATCTTTC
AGAACCTGGCACTGGCTTATTCGTCGGTGATCTTTCACCAGCTGGCGCGG
TTGCTCCTTACGCCTGCTACGGCGTTGTTGAATTTTGCGCTGTTCCAGTC
CAGCATCCCCAGAGCGGCGTTCCTTCCCCTGGTCCTACTGTGCACGGGAG
TTGGAATTGTCTCCTACTTTGATTCGCTCCCGTCCGCGAAAGGCAACGAT
ACCACGACACCAGAGGGTATTTTCTTCGCTTTGTCTGGTGTGTGCGCTAG
TGCACTGTACACGGTCCTGGTGGGCCGGTATCATAAGAAGCTGGAGATGA
GCAGTATGCAGCTTCTACTTAATCAGGCCCCTGTCAGTGCTGCTGTCCTA
TTGTGTGTTGTTCCATGGATGGAGACGTTTCCGGAGGTTGCGGCTGTCCC
TGGGTCGTTGTGGACTTCGATACTTGCGATGGTTGTTGCAGGATCGAATC
TGCGGGATGATGAGTGCAAGGGTCTATTGACTTCAGTGACTTGCACTCCT
GCAAGCCCACCACCACCACCATCGGACGATGTGAAGCTTGAGTTGGGATA
CTATTCGTACGAGGACGAAAAGAGACCTGAAGTGTTGTCTGAGGAGCCGG
AAAAGCAGATAGGGAGTGTTCGACTTCTTGTATGGATGACAATCAATATT
GTTGCGACTGTTGCCATC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000620 |
| DBxref | PFAM:PF00892 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:558450..559722 - |
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