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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:724685..726447+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002661-T1 ID=CBS51388_002661-T1|Name=CBS51388_002661-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1763bp|location=Sequence derived from alignment at An03:724685..726447+ (Aspergillus niger CBS 513.88)
ATGCCATTCATTCCGCTACTCTTCGTCCTGGCGAGTATAACTTTGTTTTT
TTCGCGACGTCGTTATAAAGCTATCGAGAGCGCTGAGCCGCCGGTGGTTG
TTAAGGGGCATACGTACTCTGATAGTGTGGATGAGACCGAGCTTCAGCCT
CTGGAGAGTAAGAAAGTTGAGCATGTTCGGAGTGCTTGTATCATTGGGGC
TGGACATGTGGGTAAGCGCGCTGCTCTCACCTGCCAGTATCTCGGAAGGA
TAGCTAATGTCGGCCAGGTGCATTGACGGCGGTTGTACTCGCCTCTCAGA
ATCCCCACATCCAGTTCAGTGTCGTTGACAATGATGCGGGTCTCATTAAC
GCGTGGAACTCCGATCGGCCCCCAGTGTTTGAGCCTGGGTTGGAGGAGAT
GTTGTTTGAGGAGATATCAAGTCTCAATCTAGATGCGTCAGCTATCCCGG
ATCAGTCTATAGCTTCAGATTGTAGTCAGCCTCGAAAGAGGAAACTGACG
AACTTGACATTTTCCACAAACGTCCACGCAGGCGTGGCCGCAGCAGACCT
GATCTTCCTATGTTCAGAGATATTCTCAACTATAACAGTAAGGCGTCTGC
TTGCATGTGGAAGAAGAAGCTGATGATTGGTATAGATTGACGAAAAAGAG
CGCTTAGATCTGTCGCAGTTGGAGTCTGCAATCCGAGCGATCGCTCAAGT
ATCCACTGGCCACAAGATTATCGTGCAGAAGAGCACCGCTCCATGTGGTG
TCGTTCAGCGAATGAAGAAGATTGTGAGTATACTGTCAAATGTAGCAACA
TCATTCTAACGAAAGCAGTTGCGAAAAACCGCTTCTCCATCCGCTTCATT
CGATGTGCTGTCCAACCCCGACTTCTTGGTTCCAGGCACAGCCCTTCATG
ACCTCCTTTACCCTCCCCGCGTTATTATCGGGCACATATTCTCGGAAGAC
ATGTCCCCAGGAGCTTTGAGCGCACTGAAGAAGCTTTACATTCCTTGGGT
CCCAGAAGAGCGCATTATCACCATGGATGCATGGTCTTCGGAACTGGGCA
AGATTGCCGCCAACGCATTCCTCGCCCAACAAATTAGCAGTCTTCACTCG
CTGAGCGCTATTTGTGAATCCACCAACGCCAACATCAACCACATCACCCA
GACCCTCGGGTTACCGCAACGAGTCGGCTTTGGATTCGGCAGCTCGCACT
TGCAGACTGAGGTGCTGTGCCTAGTATATCTGGCCCGAGAGCTAGGACTG
CAGCAAGTGGCAGAGTACTGGCGCGCTGTCCTGCGCATGAACGATTCGCA
CAATCGACGTATCTCCCAACGAGTCCTGTCGCAGTTATCCGGCGACCTCA
CGGAGCAGAAGATTGCGGTTCTGGGGTTTACCCCAAAGGAGAACAACAAC
CAGTATTCTGTGGCGCTGGGTCTGGTCCGGGACTTGTCAAAGAACGGGGT
AAAAGTGGGCATTTATGACCCGTTTATACCTGCAGACCAGCTGGAGAACA
CGCTGCGTGCGAGCAATGCATCTCTTGAGACGGTCACAGTGGCCGACTCA
GTGGAGACGGCATGCGCGGGATGCAGTGCTGTTATTCTTCACACGGACTG
GGAGACGTTCGGACATGAGAAGGTTCGATGGCAGGGCATTGCGGGTCAGA
TGCAGAGCCCGAAGGTGTTCTTGGATCCTTATGGTGTGTTTGACCAGTTC
AAGATGCAGCAGTGGGGATTCAAGATGTTGCAGGTGGGTGTGAGGCAGAT
AGAAGCAAAGTAA back to topCoding sequence (CDS) from alignment at An03:724685..726447+ >CBS51388_002661-T1 ID=CBS51388_002661-T1|Name=CBS51388_002661-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6456bp|location=Sequence derived from alignment at An03:724685..726447+ (Aspergillus niger CBS 513.88)
ATGCCATTCATTCCGCTACTCTTCGTCCTGGCGAGTATAACTTTGTTTTT
TTCGCGACGTCGTTATAAAGCTATCGAGAGCGCTGAGCCGCCGGTGGTTG
TTAAGGGGCATACGTACTCTGATAGTGTGGATGAGACCGAGCTTCAGCCT
CTGGAGAGTAAGAAAGTTGAGCATGTTCGGAGTGCTTGTATCATTGGGGC
TGGACATGTGGGTGCATTGACGGCGGTTGTACTCGCCTCTCAGAATCCCC
ACATCCAGTTCAGTGTCGTTGACAATGATGCGGGTCTCATTAACGCGTGG
AACTCCGATCGGCCCCCAGTGTTTGAGCCTGGGTTGGAGGAGATGTTGTT
TGAGGAGATATCAAGTCTCAATCTAGATGCGTCAGCTATCCCGGATCAGT
CTATAGCTTCAGATTGTAGTCAGCCTCGAAAGAGGAAACTGACGAACTTG
ACATTTTCCACAAACGTCCACGCAGGCGTGGCCGCAGCAGACCTGATCTT
CCTATGTTCAGAGATATTCTCAACTATAACAATTGACGAAAAAGAGCGCT
TAGATCTGTCGCAGTTGGAGTCTGCAATCCGAGCGATCGCTCAAGTATCC
ACTGGCCACAAGATTATCGTGCAGAAGAGCACCGCTCCATGTGGTGTCGT
TCAGCGAATGAAGAAGATTTTGCGAAAAACCGCTTCTCCATCCGCTTCAT
TCGATGTGCTGTCCAACCCCGACTTCTTGGTTCCAGGCACAGCCCTTCAT
GACCTCCTTTACCCTCCCCGCGTTATTATCGGGCACATATTCTCGGAAGA
CATGTCCCCAGGAGCTTTGAGCGCACTGAAGAAGCTTTACATTCCTTGGG
TCCCAGAAGAGCGCATTATCACCATGGATGCATGGTCTTCGGAACTGGGC
AAGATTGCCGCCAACGCATTCCTCGCCCAACAAATTAGCAGTCTTCACTC
GCTGAGCGCTATTTGTGAATCCACCAACGCCAACATCAACCACATCACCC
AGACCCTCGGGTTACCGCAACGAGTCGGCTTTGGATTCGGCAGCTCGCAC
TTGCAGACTGAGGTGCTGTGCCTAGTATATCTGGCCCGAGAGCTAGGACT
GCAGCAAGTGGCAGAGTACTGGCGCGCTGTCCTGCGCATGAACGATTCGC
ACAATCGACGTATCTCCCAACGAGTCCTGTCGCAGTTATCCGGCGACCTC
ACGGAGCAGAAGATTGCGGTTCTGGGGTTTACCCCAAAGGAGAACAACAA
CCAGTATTCTGTGGCGCTGGGTCTGGTCCGGGACTTGTCAAAGAACGGGG
TAAAAGTGGGCATTTATGACCCGTTTATACCTGCAGACCAGCTGGAGAAC
ACGCTGCGTGCGAGCAATGCATCTCTTGAGACGGTCACAGTGGCCGACTC
AGTGGAGACGGCATGCGCGGGATGCAGTGCTGTTATTCTTCACACGGACT
GGGAGACGTTCGGACATGAGAAGGTTCGATGGCAGGGCATTGCGGGTCAG
ATGCAGAGCCCGAAGGTGTTCTTGGATCCTTATGGTGTGTTTGACCAGTT
CAAGATGCAGCAGTGGGGATTCAAGATGTTGCAGGTGGGTGTGAGGCAGA
TAGAAGCAAAGTAAATGCCATTCATTCCGCTACTCTTCGTCCTGGCGAGT
ATAACTTTGTTTTTTTCGCGACGTCGTTATAAAGCTATCGAGAGCGCTGA
GCCGCCGGTGGTTGTTAAGGGGCATACGTACTCTGATAGTGTGGATGAGA
CCGAGCTTCAGCCTCTGGAGAGTAAGAAAGTTGAGCATGTTCGGAGTGCT
TGTATCATTGGGGCTGGACATGTGGGTGCATTGACGGCGGTTGTACTCGC
CTCTCAGAATCCCCACATCCAGTTCAGTGTCGTTGACAATGATGCGGGTC
TCATTAACGCGTGGAACTCCGATCGGCCCCCAGTGTTTGAGCCTGGGTTG
GAGGAGATGTTGTTTGAGGAGATATCAAGTCTCAATCTAGATGCGTCAGC
TATCCCGGATCAGTCTATAGCTTCAGATTGTAGTCAGCCTCGAAAGAGGA
AACTGACGAACTTGACATTTTCCACAAACGTCCACGCAGGCGTGGCCGCA
GCAGACCTGATCTTCCTATGTTCAGAGATATTCTCAACTATAACAATTGA
CGAAAAAGAGCGCTTAGATCTGTCGCAGTTGGAGTCTGCAATCCGAGCGA
TCGCTCAAGTATCCACTGGCCACAAGATTATCGTGCAGAAGAGCACCGCT
CCATGTGGTGTCGTTCAGCGAATGAAGAAGATTTTGCGAAAAACCGCTTC
TCCATCCGCTTCATTCGATGTGCTGTCCAACCCCGACTTCTTGGTTCCAG
GCACAGCCCTTCATGACCTCCTTTACCCTCCCCGCGTTATTATCGGGCAC
ATATTCTCGGAAGACATGTCCCCAGGAGCTTTGAGCGCACTGAAGAAGCT
TTACATTCCTTGGGTCCCAGAAGAGCGCATTATCACCATGGATGCATGGT
CTTCGGAACTGGGCAAGATTGCCGCCAACGCATTCCTCGCCCAACAAATT
AGCAGTCTTCACTCGCTGAGCGCTATTTGTGAATCCACCAACGCCAACAT
CAACCACATCACCCAGACCCTCGGGTTACCGCAACGAGTCGGCTTTGGAT
TCGGCAGCTCGCACTTGCAGACTGAGGTGCTGTGCCTAGTATATCTGGCC
CGAGAGCTAGGACTGCAGCAAGTGGCAGAGTACTGGCGCGCTGTCCTGCG
CATGAACGATTCGCACAATCGACGTATCTCCCAACGAGTCCTGTCGCAGT
TATCCGGCGACCTCACGGAGCAGAAGATTGCGGTTCTGGGGTTTACCCCA
AAGGAGAACAACAACCAGTATTCTGTGGCGCTGGGTCTGGTCCGGGACTT
GTCAAAGAACGGGGTAAAAGTGGGCATTTATGACCCGTTTATACCTGCAG
ACCAGCTGGAGAACACGCTGCGTGCGAGCAATGCATCTCTTGAGACGGTC
ACAGTGGCCGACTCAGTGGAGACGGCATGCGCGGGATGCAGTGCTGTTAT
TCTTCACACGGACTGGGAGACGTTCGGACATGAGAAGGTTCGATGGCAGG
GCATTGCGGGTCAGATGCAGAGCCCGAAGGTGTTCTTGGATCCTTATGGT
GTGTTTGACCAGTTCAAGATGCAGCAGTGGGGATTCAAGATGTTGCAGGT
GGGTGTGAGGCAGATAGAAGCAAAGTAAATGCCATTCATTCCGCTACTCT
TCGTCCTGGCGAGTATAACTTTGTTTTTTTCGCGACGTCGTTATAAAGCT
ATCGAGAGCGCTGAGCCGCCGGTGGTTGTTAAGGGGCATACGTACTCTGA
TAGTGTGGATGAGACCGAGCTTCAGCCTCTGGAGAGTAAGAAAGTTGAGC
ATGTTCGGAGTGCTTGTATCATTGGGGCTGGACATGTGGGTGCATTGACG
GCGGTTGTACTCGCCTCTCAGAATCCCCACATCCAGTTCAGTGTCGTTGA
CAATGATGCGGGTCTCATTAACGCGTGGAACTCCGATCGGCCCCCAGTGT
TTGAGCCTGGGTTGGAGGAGATGTTGTTTGAGGAGATATCAAGTCTCAAT
CTAGATGCGTCAGCTATCCCGGATCAGTCTATAGCTTCAGATTGTAGTCA
GCCTCGAAAGAGGAAACTGACGAACTTGACATTTTCCACAAACGTCCACG
CAGGCGTGGCCGCAGCAGACCTGATCTTCCTATGTTCAGAGATATTCTCA
ACTATAACAATTGACGAAAAAGAGCGCTTAGATCTGTCGCAGTTGGAGTC
TGCAATCCGAGCGATCGCTCAAGTATCCACTGGCCACAAGATTATCGTGC
AGAAGAGCACCGCTCCATGTGGTGTCGTTCAGCGAATGAAGAAGATTTTG
CGAAAAACCGCTTCTCCATCCGCTTCATTCGATGTGCTGTCCAACCCCGA
CTTCTTGGTTCCAGGCACAGCCCTTCATGACCTCCTTTACCCTCCCCGCG
TTATTATCGGGCACATATTCTCGGAAGACATGTCCCCAGGAGCTTTGAGC
GCACTGAAGAAGCTTTACATTCCTTGGGTCCCAGAAGAGCGCATTATCAC
CATGGATGCATGGTCTTCGGAACTGGGCAAGATTGCCGCCAACGCATTCC
TCGCCCAACAAATTAGCAGTCTTCACTCGCTGAGCGCTATTTGTGAATCC
ACCAACGCCAACATCAACCACATCACCCAGACCCTCGGGTTACCGCAACG
AGTCGGCTTTGGATTCGGCAGCTCGCACTTGCAGACTGAGGTGCTGTGCC
TAGTATATCTGGCCCGAGAGCTAGGACTGCAGCAAGTGGCAGAGTACTGG
CGCGCTGTCCTGCGCATGAACGATTCGCACAATCGACGTATCTCCCAACG
AGTCCTGTCGCAGTTATCCGGCGACCTCACGGAGCAGAAGATTGCGGTTC
TGGGGTTTACCCCAAAGGAGAACAACAACCAGTATTCTGTGGCGCTGGGT
CTGGTCCGGGACTTGTCAAAGAACGGGGTAAAAGTGGGCATTTATGACCC
GTTTATACCTGCAGACCAGCTGGAGAACACGCTGCGTGCGAGCAATGCAT
CTCTTGAGACGGTCACAGTGGCCGACTCAGTGGAGACGGCATGCGCGGGA
TGCAGTGCTGTTATTCTTCACACGGACTGGGAGACGTTCGGACATGAGAA
GGTTCGATGGCAGGGCATTGCGGGTCAGATGCAGAGCCCGAAGGTGTTCT
TGGATCCTTATGGTGTGTTTGACCAGTTCAAGATGCAGCAGTGGGGATTC
AAGATGTTGCAGGTGGGTGTGAGGCAGATAGAAGCAAAGTAAATGCCATT
CATTCCGCTACTCTTCGTCCTGGCGAGTATAACTTTGTTTTTTTCGCGAC
GTCGTTATAAAGCTATCGAGAGCGCTGAGCCGCCGGTGGTTGTTAAGGGG
CATACGTACTCTGATAGTGTGGATGAGACCGAGCTTCAGCCTCTGGAGAG
TAAGAAAGTTGAGCATGTTCGGAGTGCTTGTATCATTGGGGCTGGACATG
TGGGTGCATTGACGGCGGTTGTACTCGCCTCTCAGAATCCCCACATCCAG
TTCAGTGTCGTTGACAATGATGCGGGTCTCATTAACGCGTGGAACTCCGA
TCGGCCCCCAGTGTTTGAGCCTGGGTTGGAGGAGATGTTGTTTGAGGAGA
TATCAAGTCTCAATCTAGATGCGTCAGCTATCCCGGATCAGTCTATAGCT
TCAGATTGTAGTCAGCCTCGAAAGAGGAAACTGACGAACTTGACATTTTC
CACAAACGTCCACGCAGGCGTGGCCGCAGCAGACCTGATCTTCCTATGTT
CAGAGATATTCTCAACTATAACAATTGACGAAAAAGAGCGCTTAGATCTG
TCGCAGTTGGAGTCTGCAATCCGAGCGATCGCTCAAGTATCCACTGGCCA
CAAGATTATCGTGCAGAAGAGCACCGCTCCATGTGGTGTCGTTCAGCGAA
TGAAGAAGATTTTGCGAAAAACCGCTTCTCCATCCGCTTCATTCGATGTG
CTGTCCAACCCCGACTTCTTGGTTCCAGGCACAGCCCTTCATGACCTCCT
TTACCCTCCCCGCGTTATTATCGGGCACATATTCTCGGAAGACATGTCCC
CAGGAGCTTTGAGCGCACTGAAGAAGCTTTACATTCCTTGGGTCCCAGAA
GAGCGCATTATCACCATGGATGCATGGTCTTCGGAACTGGGCAAGATTGC
CGCCAACGCATTCCTCGCCCAACAAATTAGCAGTCTTCACTCGCTGAGCG
CTATTTGTGAATCCACCAACGCCAACATCAACCACATCACCCAGACCCTC
GGGTTACCGCAACGAGTCGGCTTTGGATTCGGCAGCTCGCACTTGCAGAC
TGAGGTGCTGTGCCTAGTATATCTGGCCCGAGAGCTAGGACTGCAGCAAG
TGGCAGAGTACTGGCGCGCTGTCCTGCGCATGAACGATTCGCACAATCGA
CGTATCTCCCAACGAGTCCTGTCGCAGTTATCCGGCGACCTCACGGAGCA
GAAGATTGCGGTTCTGGGGTTTACCCCAAAGGAGAACAACAACCAGTATT
CTGTGGCGCTGGGTCTGGTCCGGGACTTGTCAAAGAACGGGGTAAAAGTG
GGCATTTATGACCCGTTTATACCTGCAGACCAGCTGGAGAACACGCTGCG
TGCGAGCAATGCATCTCTTGAGACGGTCACAGTGGCCGACTCAGTGGAGA
CGGCATGCGCGGGATGCAGTGCTGTTATTCTTCACACGGACTGGGAGACG
TTCGGACATGAGAAGGTTCGATGGCAGGGCATTGCGGGTCAGATGCAGAG
CCCGAAGGTGTTCTTGGATCCTTATGGTGTGTTTGACCAGTTCAAGATGC
AGCAGTGGGGATTCAAGATGTTGCAGGTGGGTGTGAGGCAGATAGAAGCA
AAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000271 | polysaccharide biosynthetic process |
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003979 | UDP-glucose 6-dehydrogenase activity |
| GO:0051287 | NAD binding |
| GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.5 |
| Note | SECRETED:SignalP(1-18) |
| Note | SMCOG1152:nucleotide sugar dehydrogenase |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008927 |
| DBxref | InterPro:IPR036220 |
| DBxref | InterPro:IPR014026 |
| DBxref | InterPro:IPR017476 |
| DBxref | InterPro:IPR001732 |
| DBxref | InterPro:IPR028357 |
| DBxref | InterPro:IPR014027 |
| DBxref | PFAM:PF03720 |
| DBxref | PFAM:PF00984 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:724685..726447 + |
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