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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:903229..904697- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002708-T1 ID=CBS51388_002708-T1|Name=CBS51388_002708-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1469bp|location=Sequence derived from alignment at An03:903229..904697- (Aspergillus niger CBS 513.88)
ATGTCGTGCTCAGATCATCTTCTGTCCCTTGCCGCGCCCCTTTTCGATCC
TCACCCGCCAATCAAAGCCGCCCGCTGCGATCGATTCTTATCCTTGGGCC
ATCGACATCATTTCCTTCTCCTCCCACCACAACGTCTCACCTCTCCTCGT
CCACCACGGCCTCTCCGCCATCTAAGCGCGCCTCGCGGCCCTCTCGGTCG
TTTTCCTCTTCGAAAACGTCTCCTATCGCGTCGCGAACGGGCCCTTCACT
ATCCTCGCCCCCGGTTAAAGAAGCATCCCCTTATCCCCCGCGAGGCCTCC
GCGTTCGGTGCCATTCCTTCGAGGCACATCCCCCCACATCCTCCGATCAG
GTCACCGCAGCGAGTTCCTCCCAATCACGATTCTCATACCGGCGAAAGAG
TTCCTGGATACCTCCCACGATCTTGCGCCCACCGTCGGTGCGACTCGCAA
ACCCCGTCAACTACGTTCCCCGCAACACTCCGGTCACGGTACCCCATCTG
TCGCAGCTCTCCGACGAGAACCTTCCACTCGACGCACACCGTGACGCCTA
CCCTTTGCTGACTATCCCCGAACGGCGTCGCAGTCGACCGACCCCATCCC
CGAACAGTCTGGTGGTGGAGCGCAGTCAGGGGGAAACGGAGAGTGGACGC
TCTAGCATCGCAGTGCCTCGCGGCCAGAGGCGCAGTGGCGCATTTGACGA
CCAGCTGGTGTTACGAGAAATGTCCGAGTCGGGAGTGTCAAATGGTGCTC
CGGAGGTAAAGAACCCTCGCGCACCGGAACGAGCGCATCTGGGCTTCGAT
TTTGCGGTAGACGGACCTGGACCGCTTCACGACGACCGGCCTCGCCACAT
CCAGTCGCAATCCTCGCTGCGGTCACAGTCACACATTGCATCCGTACCAT
CCATTACTGGAGCCCAGAACGGCGGCGAGACGGATGTAGCGGAGGAGTTA
GCCTGGGGCCCTGCGCATCCGTGTTATCCTCACATCAACCCACATGTTCC
GATCGGGTCCGAGGAGTACATGACGACCCGCATCATACGAATCCGGCGTG
ATTGGATGATCAAGGGGGACCTGGCTCCCACATTTTCCAACCTATACCCC
GAGATTCTGGACCCGCTATTACCTGAACAAGAGTTTCGAAAGGTGATAGC
CACTGTGAATGACGAGCTCATCAAGGCGTTCGATCCGTTCAGTGTTCGCA
ATTTCATCGACAGTGCGCTGAGCCTTCTGACAGGATGGATTTGGGAAGAC
ATAGGCGCGCCAGGTATCAAAAGCCATCTCAAACGGGTGGAAGCTTGGCT
GGAGAGGTGGAACAGAGAGGTCGGGGCCAAGGACGGAGTGCATATCTGGA
GTCTCCGCAGGACGGCGTACATGTCGCTAGACATCCAGATTCCGGATCCC
AAGGTTGGAATTATTCGCAGTGAAGGAGTCCCATCACTTTCAGGGACCAG
GCCGAGCAGCGGTGTCTGA back to topCoding sequence (CDS) from alignment at An03:903229..904697- >CBS51388_002708-T1 ID=CBS51388_002708-T1|Name=CBS51388_002708-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2814bp|location=Sequence derived from alignment at An03:903229..904697- (Aspergillus niger CBS 513.88)
CCGCCCGCTGCGATCGATTCTTATCCTTGGGCCATCGACATCATTTCCTT
CTCCTCCCACCACAACGTCTCACCTCTCCTCGTCCACCACGGCCTCTCCG
CCATCTAAGCGCGCCTCGCGGCCCTCTCGGTCGTTTTCCTCTTCGAAAAC
GTCTCCTATCGCGTCGCGAACGGGCCCTTCACTATCCTCGCCCCCGGTTA
AAGAAGCATCCCCTTATCCCCCGCGAGGCCTCCGCGTTCGGTGCCATTCC
TTCGAGGCACATCCCCCCACATCCTCCGATCAGGTCACCGCAGCGAGTTC
CTCCCAATCACGATTCTCATACCGGCGAAAGAGTTCCTGGATACCTCCCA
CGATCTTGCGCCCACCGTCGGTGCGACTCGCAAACCCCGTCAACTACGTT
CCCCGCAACACTCCGGTCACGGTACCCCATCTGTCGCAGCTCTCCGACGA
GAACCTTCCACTCGACGCACACCGTGACGCCTACCCTTTGCTGACTATCC
CCGAACGGCGTCGCAGTCGACCGACCCCATCCCCGAACAGTCTGGTGGTG
GAGCGCAGTCAGGGGGAAACGGAGAGTGGACGCTCTAGCATCGCAGTGCC
TCGCGGCCAGAGGCGCAGTGGCGCATTTGACGACCAGCTGGTGTTACGAG
AAATGTCCGAGTCGGGAGTGTCAAATGGTGCTCCGGAGGTAAAGAACCCT
CGCGCACCGGAACGAGCGCATCTGGGCTTCGATTTTGCGGTAGACGGACC
TGGACCGCTTCACGACGACCGGCCTCGCCACATCCAGTCGCAATCCTCGC
TGCGGTCACAGTCACACATTGCATCCGTACCATCCATTACTGGAGCCCAG
AACGGCGGCGAGACGGATGTAGCGGAGGAGTTAGCCTGGGGCCCTGCGCA
TCCGTGTTATCCTCACATCAACCCACATGTTCCGATCGGGTCCGAGGAGT
ACATGACGACCCGCATCATACGAATCCGGCGTGATTGGATGATCAAGGGG
GACCTGGCTCCCACATTTTCCAACCTATACCCCGAGATTCTGGACCCGCT
ATTACCTGAACAAGAGTTTCGAAAGGTGATAGCCACTGTGAATGACGAGC
TCATCAAGGCGTTCGATCCGTTCAGTGTTCGCAATTTCATCGACAGTGCG
CTGAGCCTTCTGACAGGATGGATTTGGGAAGACATAGGCGCGCCAGGTAT
CAAAAGCCATCTCAAACGGGTGGAAGCTTGGCTGGAGAGGTGGAACAGAG
AGGTCGGGGCCAAGGACGGAGTGCATATCTGGAGTCTCCGCAGGACGGCG
TACATGTCGCTAGACATCCAGATTCCGGATCCCAAGGTTGGAATTATTCG
CAGTGAAGGAGTCCCATCACTTTCAGGGACCAGGCCGAGCAGCGGTGTCT
GAATGTCCCGCCCGCTGCGATCGATTCTTATCCTTGGGCCATCGACATCA
TTTCCTTCTCCTCCCACCACAACGTCTCACCTCTCCTCGTCCACCACGGC
CTCTCCGCCATCTAAGCGCGCCTCGCGGCCCTCTCGGTCGTTTTCCTCTT
CGAAAACGTCTCCTATCGCGTCGCGAACGGGCCCTTCACTATCCTCGCCC
CCGGTTAAAGAAGCATCCCCTTATCCCCCGCGAGGCCTCCGCGTTCGGTG
CCATTCCTTCGAGGCACATCCCCCCACATCCTCCGATCAGGTCACCGCAG
CGAGTTCCTCCCAATCACGATTCTCATACCGGCGAAAGAGTTCCTGGATA
CCTCCCACGATCTTGCGCCCACCGTCGGTGCGACTCGCAAACCCCGTCAA
CTACGTTCCCCGCAACACTCCGGTCACGGTACCCCATCTGTCGCAGCTCT
CCGACGAGAACCTTCCACTCGACGCACACCGTGACGCCTACCCTTTGCTG
ACTATCCCCGAACGGCGTCGCAGTCGACCGACCCCATCCCCGAACAGTCT
GGTGGTGGAGCGCAGTCAGGGGGAAACGGAGAGTGGACGCTCTAGCATCG
CAGTGCCTCGCGGCCAGAGGCGCAGTGGCGCATTTGACGACCAGCTGGTG
TTACGAGAAATGTCCGAGTCGGGAGTGTCAAATGGTGCTCCGGAGGTAAA
GAACCCTCGCGCACCGGAACGAGCGCATCTGGGCTTCGATTTTGCGGTAG
ACGGACCTGGACCGCTTCACGACGACCGGCCTCGCCACATCCAGTCGCAA
TCCTCGCTGCGGTCACAGTCACACATTGCATCCGTACCATCCATTACTGG
AGCCCAGAACGGCGGCGAGACGGATGTAGCGGAGGAGTTAGCCTGGGGCC
CTGCGCATCCGTGTTATCCTCACATCAACCCACATGTTCCGATCGGGTCC
GAGGAGTACATGACGACCCGCATCATACGAATCCGGCGTGATTGGATGAT
CAAGGGGGACCTGGCTCCCACATTTTCCAACCTATACCCCGAGATTCTGG
ACCCGCTATTACCTGAACAAGAGTTTCGAAAGGTGATAGCCACTGTGAAT
GACGAGCTCATCAAGGCGTTCGATCCGTTCAGTGTTCGCAATTTCATCGA
CAGTGCGCTGAGCCTTCTGACAGGATGGATTTGGGAAGACATAGGCGCGC
CAGGTATCAAAAGCCATCTCAAACGGGTGGAAGCTTGGCTGGAGAGGTGG
AACAGAGAGGTCGGGGCCAAGGACGGAGTGCATATCTGGAGTCTCCGCAG
GACGGCGTACATGTCGCTAGACATCCAGATTCCGGATCCCAAGGTTGGAA
TTATTCGCAGTGAAGGAGTCCCATCACTTTCAGGGACCAGGCCGAGCAGC
GGTGTCTGAATGTC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019383 |
| DBxref | PFAM:PF10256 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:903229..904697 - |
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