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CBS51388_002737-T1, CBS51388_002737-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002737-T1
Unique NameCBS51388_002737-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An03:988768..989854+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002737-T1 ID=CBS51388_002737-T1|Name=CBS51388_002737-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1087bp|location=Sequence derived from alignment at An03:988768..989854+ (Aspergillus niger CBS 513.88)
ATGGGATCGCTGATGCGTTTGTCGACATACAGTGACTGGGTTCATGACAA
GTACGAAGACGACAGAGATGGTGCGTTATACGACTCTCAATATGGCGAAT
AGCCATGGGAAATCATCCATGATCGGTCATTCTTAACACCTTACTCAGCA
CGCCCTTCTCGTGCCCCCCGACGTCCGCGTGGCGACCGCTACTCCCCCTC
TCCCGAACAGTATGTTTATCCAGTGGCGCTTCGGTGAACGAAGCTGACCT
GTACAGACACAGCACTGCATCTAGCGGAGCTAAACTTCGTGTTGAGAACA
TCCATTACGACATTACAGAAACCGATCTCGAGGTAGGCCTCATTCCAGTC
CCCGCGTTTTTTCCTACTGAGCTCTGACATATGCAATGTAAAAGGACCTG
TTCACCCGCATCGGACCAATCAGTAATGTTTCTCTCGTTTACGACCGGGC
AGGACGTTCCGAAGGAGTCGCCTTTGTGACCTACACTCATATCGGCGATG
CGCGAACCGCGATTAGAGAATTCGACGGCGCAAACGCCAAAGGCCAGCCT
ATTCGTTTAACACTGATCTCTACCGGTGCCGGAAGACGCGACCGCAACCC
ATTTGACAACGTGGAACGCTCGAAGGGAAGTCTATTTGACCGCGTCGAGA
GACCCCGTGACCGCGACGCACGGAGTCTCAGCCCCGGTAGTAGGAGCGGC
AGTCCTGATGGAGGTGCACGCCGCCGTCGTGGTCGTCGCGGTGGTGGCGG
CGGCGGGTACCGGCGCAGTGACGTCTCCAAACCGGCTCCCGAGCACATTG
ACAGATACATTCCTGGTCAGCGGTCGCCGACTCGCAACCGCGGCGCTACG
AACGGGCGCCGCCAAGGCGGTGGAGGTGAGAACAAGGGCGACAGCCGTCG
CATGGTTAACGGACGGCCCAGAAAGACACAGGAAGAGCTCGATCAAGAAA
TGGACGATTACTGGGGTGGCTCCGGCAACGCTGGTGCCGGCGCAGCTGAT
AAAGAAGTTGTCCCTGACGAGCCTCAGCAGATTGCACCGGCGTCTGCGGC
CGCTGCTGGTGATGATGATATCGACATGATTGAGTGA
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Coding sequence (CDS) from alignment at An03:988768..989854+

>CBS51388_002737-T1 ID=CBS51388_002737-T1|Name=CBS51388_002737-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3600bp|location=Sequence derived from alignment at An03:988768..989854+ (Aspergillus niger CBS 513.88)
ATGGGATCGCTGATGCGTTTGTCGACATACAGTGACTGGGTTCATGACAA
GTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCCCCCGACGTCCGC
GTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGCACTGCATCTAGC
GGAGCTAAACTTCGTGTTGAGAACATCCATTACGACATTACAGAAACCGA
TCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTAATGTTTCTCTCG
TTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTTGTGACCTACACT
CATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGACGGCGCAAACGC
CAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCGGTGCCGGAAGAC
GCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAGGGAAGTCTATTT
GACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAGTCTCAGCCCCGG
TAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCCGTCGTGGTCGTC
GCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTCTCCAAACCGGCT
CCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTCGCCGACTCGCAA
CCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAGGTGAGAACAAGG
GCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAGACACAGGAAGAG
CTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGGCAACGCTGGTGC
CGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTCAGCAGATTGCAC
CGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGACATGATTGAGTGA
ATGGGATCGCTGATGCGTTTGTCGACATACAGTGACTGGGTTCATGACAA
GTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCCCCCGACGTCCGC
GTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGCACTGCATCTAGC
GGAGCTAAACTTCGTGTTGAGAACATCCATTACGACATTACAGAAACCGA
TCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTAATGTTTCTCTCG
TTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTTGTGACCTACACT
CATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGACGGCGCAAACGC
CAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCGGTGCCGGAAGAC
GCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAGGGAAGTCTATTT
GACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAGTCTCAGCCCCGG
TAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCCGTCGTGGTCGTC
GCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTCTCCAAACCGGCT
CCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTCGCCGACTCGCAA
CCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAGGTGAGAACAAGG
GCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAGACACAGGAAGAG
CTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGGCAACGCTGGTGC
CGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTCAGCAGATTGCAC
CGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGACATGATTGAGTGA
ATGGGATCGCTGATGCGTTTGTCGACATACAGTGACTGGGTTCATGACAA
GTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCCCCCGACGTCCGC
GTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGCACTGCATCTAGC
GGAGCTAAACTTCGTGTTGAGAACATCCATTACGACATTACAGAAACCGA
TCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTAATGTTTCTCTCG
TTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTTGTGACCTACACT
CATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGACGGCGCAAACGC
CAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCGGTGCCGGAAGAC
GCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAGGGAAGTCTATTT
GACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAGTCTCAGCCCCGG
TAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCCGTCGTGGTCGTC
GCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTCTCCAAACCGGCT
CCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTCGCCGACTCGCAA
CCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAGGTGAGAACAAGG
GCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAGACACAGGAAGAG
CTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGGCAACGCTGGTGC
CGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTCAGCAGATTGCAC
CGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGACATGATTGAGTGA
ATGGGATCGCTGATGCGTTTGTCGACATACAGTGACTGGGTTCATGACAA
GTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCCCCCGACGTCCGC
GTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGCACTGCATCTAGC
GGAGCTAAACTTCGTGTTGAGAACATCCATTACGACATTACAGAAACCGA
TCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTAATGTTTCTCTCG
TTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTTGTGACCTACACT
CATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGACGGCGCAAACGC
CAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCGGTGCCGGAAGAC
GCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAGGGAAGTCTATTT
GACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAGTCTCAGCCCCGG
TAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCCGTCGTGGTCGTC
GCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTCTCCAAACCGGCT
CCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTCGCCGACTCGCAA
CCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAGGTGAGAACAAGG
GCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAGACACAGGAAGAG
CTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGGCAACGCTGGTGC
CGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTCAGCAGATTGCAC
CGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGACATGATTGAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002737CBS51388_002737Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002737-T1.exon1CBS51388_002737-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_002737-T1.exon2CBS51388_002737-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002737-T1.exon3CBS51388_002737-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_002737-T1.exon4CBS51388_002737-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002737-T1.cdsCBS51388_002737-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002737-T1CBS51388_002737-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefInterPro:IPR025715
DBxrefPFAM:PF00076
DBxrefPFAM:PF13865
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An03supercontigAn03:988768..989854 +
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