You are here

Home

CBS51388_002801-T1, CBS51388_002801-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002801-T1
Unique NameCBS51388_002801-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An03:1169960..1170290+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002801-T1 ID=CBS51388_002801-T1|Name=CBS51388_002801-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=331bp|location=Sequence derived from alignment at An03:1169960..1170290+ (Aspergillus niger CBS 513.88)
ATGCATACCCCAAAGATCTTACTGTCCTTGTGCCTCACTATCGGTATGGC
TGCGGCTTTGCCTGGTAAGTGGCTCATCTTGTTTGATTTAAAAGGCTGTA
CTGACGCTCGCAGCGGTGGGATCTACCAGCATGTTAGACGGTGACTTGTA
CAACTACAAACGGGGTACTAGTGAGCTTGACGGAGATCTCTACAACTATA
GAAAGCGCAACAACGCCGAGCTTGATGGTGATCTTTACAACTACAGGCGC
AGCAAAGCTCAACTTGATGGAGACTTGTATAATTACAAGCGTGATGATGC
TGAGCTTGATGGTGATCTCTACAATTACTAA
back to top

Coding sequence (CDS) from alignment at An03:1169960..1170290+

>CBS51388_002801-T1 ID=CBS51388_002801-T1|Name=CBS51388_002801-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=564bp|location=Sequence derived from alignment at An03:1169960..1170290+ (Aspergillus niger CBS 513.88)
ATGCATACCCCAAAGATCTTACTGTCCTTGTGCCTCACTATCGGTATGGC
TGCGGCTTTGCCTGCGGTGGGATCTACCAGCATGTTAGACGGTGACTTGT
ACAACTACAAACGGGGTACTAGTGAGCTTGACGGAGATCTCTACAACTAT
AGAAAGCGCAACAACGCCGAGCTTGATGGTGATCTTTACAACTACAGGCG
CAGCAAAGCTCAACTTGATGGAGACTTGTATAATTACAAGCGTGATGATG
CTGAGCTTGATGGTGATCTCTACAATTACTAAATGCATACCCCAAAGATC
TTACTGTCCTTGTGCCTCACTATCGGTATGGCTGCGGCTTTGCCTGCGGT
GGGATCTACCAGCATGTTAGACGGTGACTTGTACAACTACAAACGGGGTA
CTAGTGAGCTTGACGGAGATCTCTACAACTATAGAAAGCGCAACAACGCC
GAGCTTGATGGTGATCTTTACAACTACAGGCGCAGCAAAGCTCAACTTGA
TGGAGACTTGTATAATTACAAGCGTGATGATGCTGAGCTTGATGGTGATC
TCTACAATTACTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002801CBS51388_002801Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002801-T1.exon1CBS51388_002801-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_002801-T1.exon2CBS51388_002801-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002801-T1.cdsCBS51388_002801-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002801-T1CBS51388_002801-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An03supercontigAn03:1169960..1170290 +
Powered by Drupal