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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:1233567..1234363- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002823-T1 ID=CBS51388_002823-T1|Name=CBS51388_002823-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=797bp|location=Sequence derived from alignment at An03:1233567..1234363- (Aspergillus niger CBS 513.88)
ATGAACCGGTACCTGTCTATCCCCCTGTGCTTGGCGAGCGCTGTTCCTGC
GCTAGCGGGTCTGGCGGCCCGCGACCCCATCGGTACCATCTGCACCAAGA
ACAACATCATCACCACCGACGACTTCATCCTCTACAATAATCTCTGGGGC
GAGGACTATGCCACTTCCGGCTCCGAGTGTACCTACCTCGACTATGACAG
CGGCAACTCCATCTCATGGCAGACGTCGTGGACCTGGGCTGGCGGCGACG
ACTATGTCAAGAGCTATCCCAATGCCGTCCTGAACGTCGGTGCCAAGCAG
CTGAGCACGATCACCAGTATTCCCTCGACCTGGAAATGGAGGTGAGCCAA
TCTTTCCTGTCACGAATGAAGCTATTGTCTAATATTCTTAGCTACACGGG
CAACGACCTCGTCGCCGACGTCTCCTACGATGCCTTCCTCTCCACCACTG
ATTCCACAACCGCCACTCACGAGTACGAAATCATGATCTGGCTCGCCGCC
TACGGTGGCATTGAGCCCATCGGCAACTCGGACGGTCCTATCGCCAGCCC
CACTATCGGTGGCTACACCTGGGATCTCTACAAGGGTCCCAACGACTGGA
CAGTGTATAGTTTCGTGGCCCGCGAGACTATCACGGACTTCTCGGCCGAT
GTCTTGGAGTTCTTTACTTATTTGGTTGATAACGAGGGTGTCTCTTCGAG
CTTGTATTTGCAGACCCTGGGTGCGGGCACTGAACCGAAGACTGGCTCTG
ATGCTTGGTTCACGGTTTCGCCGTATACTGTTAGCATCAATACTTAG back to topCoding sequence (CDS) from alignment at An03:1233567..1234363- >CBS51388_002823-T1 ID=CBS51388_002823-T1|Name=CBS51388_002823-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1494bp|location=Sequence derived from alignment at An03:1233567..1234363- (Aspergillus niger CBS 513.88)
CTACACGGGCAACGACCTCGTCGCCGACGTCTCCTACGATGCCTTCCTCT
CCACCACTGATTCCACAACCGCCACTCACGAGTACGAAATCATGATCTGG
CTCGCCGCCTACGGTGGCATTGAGCCCATCGGCAACTCGGACGGTCCTAT
CGCCAGCCCCACTATCGGTGGCTACACCTGGGATCTCTACAAGGGTCCCA
ACGACTGGACAGTGTATAGTTTCGTGGCCCGCGAGACTATCACGGACTTC
TCGGCCGATGTCTTGGAGTTCTTTACTTATTTGGTTGATAACGAGGGTGT
CTCTTCGAGCTTGTATTTGCAGACCCTGGGTGCGGGCACTGAACCGAAGA
CTGGCTCTGATGCTTGGTTCACGGTTTCGCCGTATACTGTTAGCATCAAT
ACTTAGATGAACCGGTACCTGTCTATCCCCCTGTGCTTGGCGAGCGCTGT
TCCTGCGCTAGCGGGTCTGGCGGCCCGCGACCCCATCGGTACCATCTGCA
CCAAGAACAACATCATCACCACCGACGACTTCATCCTCTACAATAATCTC
TGGGGCGAGGACTATGCCACTTCCGGCTCCGAGTGTACCTACCTCGACTA
TGACAGCGGCAACTCCATCTCATGGCAGACGTCGTGGACCTGGGCTGGCG
GCGACGACTATGTCAAGAGCTATCCCAATGCCGTCCTGAACGTCGGTGCC
AAGCAGCTGAGCACGATCACCAGTATTCCCTCGACCTGGAAATGGAGCTA
CACGGGCAACGACCTCGTCGCCGACGTCTCCTACGATGCCTTCCTCTCCA
CCACTGATTCCACAACCGCCACTCACGAGTACGAAATCATGATCTGGCTC
GCCGCCTACGGTGGCATTGAGCCCATCGGCAACTCGGACGGTCCTATCGC
CAGCCCCACTATCGGTGGCTACACCTGGGATCTCTACAAGGGTCCCAACG
ACTGGACAGTGTATAGTTTCGTGGCCCGCGAGACTATCACGGACTTCTCG
GCCGATGTCTTGGAGTTCTTTACTTATTTGGTTGATAACGAGGGTGTCTC
TTCGAGCTTGTATTTGCAGACCCTGGGTGCGGGCACTGAACCGAAGACTG
GCTCTGATGCTTGGTTCACGGTTTCGCCGTATACTGTTAGCATCAATACT
TAGATGAACCGGTACCTGTCTATCCCCCTGTGCTTGGCGAGCGCTGTTCC
TGCGCTAGCGGGTCTGGCGGCCCGCGACCCCATCGGTACCATCTGCACCA
AGAACAACATCATCACCACCGACGACTTCATCCTCTACAATAATCTCTGG
GGCGAGGACTATGCCACTTCCGGCTCCGAGTGTACCTACCTCGACTATGA
CAGCGGCAACTCCATCTCATGGCAGACGTCGTGGACCTGGGCTGGCGGCG
ACGACTATGTCAAGAGCTATCCCAATGCCGTCCTGAACGTCGGTGCCAAG
CAGCTGAGCACGATCACCAGTATTCCCTCGACCTGGAAATGGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000272 | polysaccharide catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008810 | cellulase activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.7 |
| Note | SECRETED:SignalP(1-22) |
| Note | CAZy:GH12 |
| DBxref | InterPro:IPR013320 |
| DBxref | InterPro:IPR002594 |
| DBxref | InterPro:IPR013319 |
| DBxref | PFAM:PF01670 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:1233567..1234363 - |
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