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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:1415764..1417089+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002884-T1 ID=CBS51388_002884-T1|Name=CBS51388_002884-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1326bp|location=Sequence derived from alignment at An03:1415764..1417089+ (Aspergillus niger CBS 513.88)
ATGGTTAAGTCAATTCTTGCATCCGTTTTCTTTGCGGCGACTGCGCTGGC
CGCGAGCCGCATGACGGCTCCTTCCGGTGCGATTGTCGTTGCCAAGTCCG
GAGGTGACTACGACACGGTGAGCATCTAGACTGTCGATCGTGTTGCAGAT
GTGTGGCTGATAGTGTCTTGTTGAACAGATCAGCGCTGCCGTTGATGCTC
TGAGCACCACTTCGACCGAGACCCAGACTATCTTCATTGAGGAGGGATCC
TACGACGAGCAGGTGTACATTCCCGCTCTCAGTGGAAAGCTGATCGTCTA
CGGTCAGACTGAGGAGTACGTTGTCAGTTGCGTATAGAAATTCAAGGATA
CTAATGAAGGTTTAGCACCACCACCTACACCAGCAACCTGGTCAACATCA
CCCACGCCATTGCCTTAGCCGATGTCGACAATGACGATGAGACTGGTCGG
TCCACACACTCTGGAAAATGTCCGTGAACTCGCTAACAATAAGTAGCAAC
CCTCCGTAACTACGCCGAGGGCTCGGCCATCTACAACCTAAACATTGCCA
ACACCTGCGGTCAGGCCTGCCACCAGGCTCTCGCCGTGAGTGCCTATGCC
ACCGAGCAGGGATACTACGCCTGCCAGTTCACCGGATACCAGGGTAGGAC
CAATTTCAGATATGCCAACCGACAGTGATTAATCTCTACTATAGACACCC
TTCTGGCTGAGACCGGTTACCAGGTTTACGCCGGAACCTACATCGAGGGT
GCCGTGTATGTCCCTACCTTAATACCTTCGAAAGAAGTGAATCCAACTAA
CGTACAACCAGTGACTTTATTTTCGGACAGCACGCCCGCGCTTGGTTCCA
CGAGTGCGACATCCGCGTTCTCGAGGGCCCCAGCTCCGCCTCCATCACCG
CCAACGGCCGCTCCTCCGAGTCCGACGACTCCTACTACGTGATCCACAAG
TCCACCGTCGCTGCTGCTGATGGCAACGATGTTTCCTCGGGCACCTACTA
TCTTGGTATGCCACTGGTCTAGAACTGTCCACGGAGCCACTAGCCCACTA
ACGAATATTATCACAGGCCGCCCCTGGTCCCAGTACGCTCGCGTCTGCTT
CCAGAAGACCTCCATGACCGATGTGATCAACCACCTCGGCTGGACTGAGT
GGTCGACCTCCACCCCCAACACTGAGAATGTCACCTTTGTTGAATACGGC
AACACCGGTGCTGGTTCTAAGGGCCCCCGTGCTAACTTCTCTTCTGAGCT
CACCGAGCCCATCTCTATCTCTACCCTTCTGGGCTCTGACTGGGAGGACT
GGGTTGATACCAGCTACATCAACTAA back to topCoding sequence (CDS) from alignment at An03:1415764..1417089+ >CBS51388_002884-T1 ID=CBS51388_002884-T1|Name=CBS51388_002884-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6972bp|location=Sequence derived from alignment at An03:1415764..1417089+ (Aspergillus niger CBS 513.88)
ATGGTTAAGTCAATTCTTGCATCCGTTTTCTTTGCGGCGACTGCGCTGGC
CGCGAGCCGCATGACGGCTCCTTCCGGTGCGATTGTCGTTGCCAAGTCCG
GAGGTGACTACGACACGATCAGCGCTGCCGTTGATGCTCTGAGCACCACT
TCGACCGAGACCCAGACTATCTTCATTGAGGAGGGATCCTACGACGAGCA
GGTGTACATTCCCGCTCTCAGTGGAAAGCTGATCGTCTACGGTCAGACTG
AGGACACCACCACCTACACCAGCAACCTGGTCAACATCACCCACGCCATT
GCCTTAGCCGATGTCGACAATGACGATGAGACTGCAACCCTCCGTAACTA
CGCCGAGGGCTCGGCCATCTACAACCTAAACATTGCCAACACCTGCGGTC
AGGCCTGCCACCAGGCTCTCGCCGTGAGTGCCTATGCCACCGAGCAGGGA
TACTACGCCTGCCAGTTCACCGGATACCAGGACACCCTTCTGGCTGAGAC
CGGTTACCAGGTTTACGCCGGAACCTACATCGAGGGTGCCGTTGACTTTA
TTTTCGGACAGCACGCCCGCGCTTGGTTCCACGAGTGCGACATCCGCGTT
CTCGAGGGCCCCAGCTCCGCCTCCATCACCGCCAACGGCCGCTCCTCCGA
GTCCGACGACTCCTACTACGTGATCCACAAGTCCACCGTCGCTGCTGCTG
ATGGCAACGATGTTTCCTCGGGCACCTACTATCTTGGCCGCCCCTGGTCC
CAGTACGCTCGCGTCTGCTTCCAGAAGACCTCCATGACCGATGTGATCAA
CCACCTCGGCTGGACTGAGTGGTCGACCTCCACCCCCAACACTGAGAATG
TCACCTTTGTTGAATACGGCAACACCGGTGCTGGTTCTAAGGGCCCCCGT
GCTAACTTCTCTTCTGAGCTCACCGAGCCCATCTCTATCTCTACCCTTCT
GGGCTCTGACTGGGAGGACTGGGTTGATACCAGCTACATCAACTAAATGG
TTAAGTCAATTCTTGCATCCGTTTTCTTTGCGGCGACTGCGCTGGCCGCG
AGCCGCATGACGGCTCCTTCCGGTGCGATTGTCGTTGCCAAGTCCGGAGG
TGACTACGACACGATCAGCGCTGCCGTTGATGCTCTGAGCACCACTTCGA
CCGAGACCCAGACTATCTTCATTGAGGAGGGATCCTACGACGAGCAGGTG
TACATTCCCGCTCTCAGTGGAAAGCTGATCGTCTACGGTCAGACTGAGGA
CACCACCACCTACACCAGCAACCTGGTCAACATCACCCACGCCATTGCCT
TAGCCGATGTCGACAATGACGATGAGACTGCAACCCTCCGTAACTACGCC
GAGGGCTCGGCCATCTACAACCTAAACATTGCCAACACCTGCGGTCAGGC
CTGCCACCAGGCTCTCGCCGTGAGTGCCTATGCCACCGAGCAGGGATACT
ACGCCTGCCAGTTCACCGGATACCAGGACACCCTTCTGGCTGAGACCGGT
TACCAGGTTTACGCCGGAACCTACATCGAGGGTGCCGTTGACTTTATTTT
CGGACAGCACGCCCGCGCTTGGTTCCACGAGTGCGACATCCGCGTTCTCG
AGGGCCCCAGCTCCGCCTCCATCACCGCCAACGGCCGCTCCTCCGAGTCC
GACGACTCCTACTACGTGATCCACAAGTCCACCGTCGCTGCTGCTGATGG
CAACGATGTTTCCTCGGGCACCTACTATCTTGGCCGCCCCTGGTCCCAGT
ACGCTCGCGTCTGCTTCCAGAAGACCTCCATGACCGATGTGATCAACCAC
CTCGGCTGGACTGAGTGGTCGACCTCCACCCCCAACACTGAGAATGTCAC
CTTTGTTGAATACGGCAACACCGGTGCTGGTTCTAAGGGCCCCCGTGCTA
ACTTCTCTTCTGAGCTCACCGAGCCCATCTCTATCTCTACCCTTCTGGGC
TCTGACTGGGAGGACTGGGTTGATACCAGCTACATCAACTAAATGGTTAA
GTCAATTCTTGCATCCGTTTTCTTTGCGGCGACTGCGCTGGCCGCGAGCC
GCATGACGGCTCCTTCCGGTGCGATTGTCGTTGCCAAGTCCGGAGGTGAC
TACGACACGATCAGCGCTGCCGTTGATGCTCTGAGCACCACTTCGACCGA
GACCCAGACTATCTTCATTGAGGAGGGATCCTACGACGAGCAGGTGTACA
TTCCCGCTCTCAGTGGAAAGCTGATCGTCTACGGTCAGACTGAGGACACC
ACCACCTACACCAGCAACCTGGTCAACATCACCCACGCCATTGCCTTAGC
CGATGTCGACAATGACGATGAGACTGCAACCCTCCGTAACTACGCCGAGG
GCTCGGCCATCTACAACCTAAACATTGCCAACACCTGCGGTCAGGCCTGC
CACCAGGCTCTCGCCGTGAGTGCCTATGCCACCGAGCAGGGATACTACGC
CTGCCAGTTCACCGGATACCAGGACACCCTTCTGGCTGAGACCGGTTACC
AGGTTTACGCCGGAACCTACATCGAGGGTGCCGTTGACTTTATTTTCGGA
CAGCACGCCCGCGCTTGGTTCCACGAGTGCGACATCCGCGTTCTCGAGGG
CCCCAGCTCCGCCTCCATCACCGCCAACGGCCGCTCCTCCGAGTCCGACG
ACTCCTACTACGTGATCCACAAGTCCACCGTCGCTGCTGCTGATGGCAAC
GATGTTTCCTCGGGCACCTACTATCTTGGCCGCCCCTGGTCCCAGTACGC
TCGCGTCTGCTTCCAGAAGACCTCCATGACCGATGTGATCAACCACCTCG
GCTGGACTGAGTGGTCGACCTCCACCCCCAACACTGAGAATGTCACCTTT
GTTGAATACGGCAACACCGGTGCTGGTTCTAAGGGCCCCCGTGCTAACTT
CTCTTCTGAGCTCACCGAGCCCATCTCTATCTCTACCCTTCTGGGCTCTG
ACTGGGAGGACTGGGTTGATACCAGCTACATCAACTAAATGGTTAAGTCA
ATTCTTGCATCCGTTTTCTTTGCGGCGACTGCGCTGGCCGCGAGCCGCAT
GACGGCTCCTTCCGGTGCGATTGTCGTTGCCAAGTCCGGAGGTGACTACG
ACACGATCAGCGCTGCCGTTGATGCTCTGAGCACCACTTCGACCGAGACC
CAGACTATCTTCATTGAGGAGGGATCCTACGACGAGCAGGTGTACATTCC
CGCTCTCAGTGGAAAGCTGATCGTCTACGGTCAGACTGAGGACACCACCA
CCTACACCAGCAACCTGGTCAACATCACCCACGCCATTGCCTTAGCCGAT
GTCGACAATGACGATGAGACTGCAACCCTCCGTAACTACGCCGAGGGCTC
GGCCATCTACAACCTAAACATTGCCAACACCTGCGGTCAGGCCTGCCACC
AGGCTCTCGCCGTGAGTGCCTATGCCACCGAGCAGGGATACTACGCCTGC
CAGTTCACCGGATACCAGGACACCCTTCTGGCTGAGACCGGTTACCAGGT
TTACGCCGGAACCTACATCGAGGGTGCCGTTGACTTTATTTTCGGACAGC
ACGCCCGCGCTTGGTTCCACGAGTGCGACATCCGCGTTCTCGAGGGCCCC
AGCTCCGCCTCCATCACCGCCAACGGCCGCTCCTCCGAGTCCGACGACTC
CTACTACGTGATCCACAAGTCCACCGTCGCTGCTGCTGATGGCAACGATG
TTTCCTCGGGCACCTACTATCTTGGCCGCCCCTGGTCCCAGTACGCTCGC
GTCTGCTTCCAGAAGACCTCCATGACCGATGTGATCAACCACCTCGGCTG
GACTGAGTGGTCGACCTCCACCCCCAACACTGAGAATGTCACCTTTGTTG
AATACGGCAACACCGGTGCTGGTTCTAAGGGCCCCCGTGCTAACTTCTCT
TCTGAGCTCACCGAGCCCATCTCTATCTCTACCCTTCTGGGCTCTGACTG
GGAGGACTGGGTTGATACCAGCTACATCAACTAAATGGTTAAGTCAATTC
TTGCATCCGTTTTCTTTGCGGCGACTGCGCTGGCCGCGAGCCGCATGACG
GCTCCTTCCGGTGCGATTGTCGTTGCCAAGTCCGGAGGTGACTACGACAC
GATCAGCGCTGCCGTTGATGCTCTGAGCACCACTTCGACCGAGACCCAGA
CTATCTTCATTGAGGAGGGATCCTACGACGAGCAGGTGTACATTCCCGCT
CTCAGTGGAAAGCTGATCGTCTACGGTCAGACTGAGGACACCACCACCTA
CACCAGCAACCTGGTCAACATCACCCACGCCATTGCCTTAGCCGATGTCG
ACAATGACGATGAGACTGCAACCCTCCGTAACTACGCCGAGGGCTCGGCC
ATCTACAACCTAAACATTGCCAACACCTGCGGTCAGGCCTGCCACCAGGC
TCTCGCCGTGAGTGCCTATGCCACCGAGCAGGGATACTACGCCTGCCAGT
TCACCGGATACCAGGACACCCTTCTGGCTGAGACCGGTTACCAGGTTTAC
GCCGGAACCTACATCGAGGGTGCCGTTGACTTTATTTTCGGACAGCACGC
CCGCGCTTGGTTCCACGAGTGCGACATCCGCGTTCTCGAGGGCCCCAGCT
CCGCCTCCATCACCGCCAACGGCCGCTCCTCCGAGTCCGACGACTCCTAC
TACGTGATCCACAAGTCCACCGTCGCTGCTGCTGATGGCAACGATGTTTC
CTCGGGCACCTACTATCTTGGCCGCCCCTGGTCCCAGTACGCTCGCGTCT
GCTTCCAGAAGACCTCCATGACCGATGTGATCAACCACCTCGGCTGGACT
GAGTGGTCGACCTCCACCCCCAACACTGAGAATGTCACCTTTGTTGAATA
CGGCAACACCGGTGCTGGTTCTAAGGGCCCCCGTGCTAACTTCTCTTCTG
AGCTCACCGAGCCCATCTCTATCTCTACCCTTCTGGGCTCTGACTGGGAG
GACTGGGTTGATACCAGCTACATCAACTAAATGGTTAAGTCAATTCTTGC
ATCCGTTTTCTTTGCGGCGACTGCGCTGGCCGCGAGCCGCATGACGGCTC
CTTCCGGTGCGATTGTCGTTGCCAAGTCCGGAGGTGACTACGACACGATC
AGCGCTGCCGTTGATGCTCTGAGCACCACTTCGACCGAGACCCAGACTAT
CTTCATTGAGGAGGGATCCTACGACGAGCAGGTGTACATTCCCGCTCTCA
GTGGAAAGCTGATCGTCTACGGTCAGACTGAGGACACCACCACCTACACC
AGCAACCTGGTCAACATCACCCACGCCATTGCCTTAGCCGATGTCGACAA
TGACGATGAGACTGCAACCCTCCGTAACTACGCCGAGGGCTCGGCCATCT
ACAACCTAAACATTGCCAACACCTGCGGTCAGGCCTGCCACCAGGCTCTC
GCCGTGAGTGCCTATGCCACCGAGCAGGGATACTACGCCTGCCAGTTCAC
CGGATACCAGGACACCCTTCTGGCTGAGACCGGTTACCAGGTTTACGCCG
GAACCTACATCGAGGGTGCCGTTGACTTTATTTTCGGACAGCACGCCCGC
GCTTGGTTCCACGAGTGCGACATCCGCGTTCTCGAGGGCCCCAGCTCCGC
CTCCATCACCGCCAACGGCCGCTCCTCCGAGTCCGACGACTCCTACTACG
TGATCCACAAGTCCACCGTCGCTGCTGCTGATGGCAACGATGTTTCCTCG
GGCACCTACTATCTTGGCCGCCCCTGGTCCCAGTACGCTCGCGTCTGCTT
CCAGAAGACCTCCATGACCGATGTGATCAACCACCTCGGCTGGACTGAGT
GGTCGACCTCCACCCCCAACACTGAGAATGTCACCTTTGTTGAATACGGC
AACACCGGTGCTGGTTCTAAGGGCCCCCGTGCTAACTTCTCTTCTGAGCT
CACCGAGCCCATCTCTATCTCTACCCTTCTGGGCTCTGACTGGGAGGACT
GGGTTGATACCAGCTACATCAACTAAATGGTTAAGTCAATTCTTGCATCC
GTTTTCTTTGCGGCGACTGCGCTGGCCGCGAGCCGCATGACGGCTCCTTC
CGGTGCGATTGTCGTTGCCAAGTCCGGAGGTGACTACGACACGATCAGCG
CTGCCGTTGATGCTCTGAGCACCACTTCGACCGAGACCCAGACTATCTTC
ATTGAGGAGGGATCCTACGACGAGCAGGTGTACATTCCCGCTCTCAGTGG
AAAGCTGATCGTCTACGGTCAGACTGAGGACACCACCACCTACACCAGCA
ACCTGGTCAACATCACCCACGCCATTGCCTTAGCCGATGTCGACAATGAC
GATGAGACTGCAACCCTCCGTAACTACGCCGAGGGCTCGGCCATCTACAA
CCTAAACATTGCCAACACCTGCGGTCAGGCCTGCCACCAGGCTCTCGCCG
TGAGTGCCTATGCCACCGAGCAGGGATACTACGCCTGCCAGTTCACCGGA
TACCAGGACACCCTTCTGGCTGAGACCGGTTACCAGGTTTACGCCGGAAC
CTACATCGAGGGTGCCGTTGACTTTATTTTCGGACAGCACGCCCGCGCTT
GGTTCCACGAGTGCGACATCCGCGTTCTCGAGGGCCCCAGCTCCGCCTCC
ATCACCGCCAACGGCCGCTCCTCCGAGTCCGACGACTCCTACTACGTGAT
CCACAAGTCCACCGTCGCTGCTGCTGATGGCAACGATGTTTCCTCGGGCA
CCTACTATCTTGGCCGCCCCTGGTCCCAGTACGCTCGCGTCTGCTTCCAG
AAGACCTCCATGACCGATGTGATCAACCACCTCGGCTGGACTGAGTGGTC
GACCTCCACCCCCAACACTGAGAATGTCACCTTTGTTGAATACGGCAACA
CCGGTGCTGGTTCTAAGGGCCCCCGTGCTAACTTCTCTTCTGAGCTCACC
GAGCCCATCTCTATCTCTACCCTTCTGGGCTCTGACTGGGAGGACTGGGT
TGATACCAGCTACATCAACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030599 | pectinesterase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042545 | cell wall modification |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-17) |
| Note | CAZy:CE8 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR018040 |
| DBxref | InterPro:IPR033131 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR000070 |
| DBxref | PFAM:PF01095 |
| Product | Pectinesterase 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:1415764..1417089 + |
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