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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:386018..388112- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003068-T1 ID=CBS51388_003068-T1|Name=CBS51388_003068-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2095bp|location=Sequence derived from alignment at An04:386018..388112- (Aspergillus niger CBS 513.88)
ATGGCTGCAGCACAGCCTCGCCCGTATCGGCGCATCTTGACCTCTGCGCT
GCACAGACGATTCGTTCATGCGTCGGCACTGGCGCTTCTGGTCTGCTATG
TAGTGGCATTTGCTATTGGCGATAAGTCATCTTGTAAGTTTACACCAACA
CCGAGCGGCGTTTGACAAGCTGTGATCGCTAACCAGCTGTGATATCTCGA
TAGTCTTGTGGGCTTGGTTCCCCATTGGAGGATGTGGAGTTCGCACAGTT
CTTCTCTTCCTCTGCAGTCTCGTTGTCTTCGTCCTCCGTGTTGGTCAGAT
GCACATCGGTGCCAGGACAACCTCCTCCCCGCTTAGCACCTTCAAATACC
TCGTTCCCCTCGACGTTATACAGACTTTTGGCTGGTACTTGTTCTCCGCC
TGGTGGTTCACTGAAATCTACAGGTGGTCTTCTTCAAGTAGCGCACACCT
GGAATTGGTGAACCGAGCTAGGTATGTTTCCTGCGACGACGAGCTCAAGC
GGTTCTCTTGAACTCGCCTAACTAGTTATGCTAGACCTCACGAACGAGCA
AGCTTAAACGAAAGAGCAATCTACCTTTATACCTACCACTTTCTCCTGGC
AGTCGCGCAGTCAGTGGTTCATCTTTACTACGACTACGATCGCGTCCCTC
TTCCCGTTGCCAGGAGGGTCGCTGGCTCCGCTGATGAAGATAGCCGGCAG
GAGCAATCGATCTCTAAACGCCTCCAGTCAGCATTGCCGCAGCTCATCAA
AGATGGGATGAAACGGAGTATCTTGGTTTCCATTCTTTGCCCATTCGCAT
ACGCCTTCGTCCTCCGGCGCCCGGCATGGAGCACTACACTGTACTTTGCA
AAGCTATTCTGGGATTTCCCGAGATCCGCTGCATCCCCTCCCGGCATTAT
CCCGCCAATCCTCGGAGTTATCGTGCGAACCTTGATTTCAGGAGGCCTCC
TGGTTCTCTGCTGGCAGACAGCTAACCTCTTTTTCTCCGTGTTCCTCAGC
AAAGAGCCGCTCAAGCGAGGCCAGCCCTTGACGGCTGAAGCCAAGGATCC
CAACGGCAGCTTGCTGAATGGACTAAAAGCAAAGAAGGAAACCGTTCGCG
CTTTTGCATTCTGGGAGCTGTACTTCATCAGTCAGAGATTCCCTGACCGC
CGGAAAGCCATCTTCAACGACATCGATCGCGAGGAGGGTGCAGCTTGGTC
GCAAATCCTGCAAGCCGCCACAGATGTCATCACGGGCGTTACCACTCGCA
TCAGCGAGGCTAAGAATCCATCATCTGGCCCTAAGCCTGCACCAGTCCAG
CAGTCCGAGCCCGTCCTTCACTCCCTGCCACGGCTGACGGACCCCCCTAA
GGCGGACAACATCTTCGCTCCGTCCCCCAAGGCAACAACTCGCCAACAAA
AGTTCGGCGAAGCCCTCACCACCACCGCCAGAGCCTACGGCAACTCCCCA
GACTGGACGCCTACCGCACGCGCCAAAGCCCGCGATGTCTTGGACCGCGC
CTCCTCCGCCATGCTGAGCCCTGAACGCAAGCAGAAGCTGCTCGGTTCCT
CCCAGGAGCTCAAGATGCTCACCGCGCCATCAACTAGCAAGCCCGAGAAC
CTGCACCCCTTCCTCGCTCAGCTCCTCCGCTCTCCACTAGGCCGACTCTT
CCGCCAAACCTACGCTCGTCGCCTCTCCGGCATTGTCCTCGGCACACCCC
ACGCCAACCTCTGCTCCGTCATCGACGCCACCGAATCCATCACCTGCCTT
CTCATCAAGAGTCTCGCGGAGGACCAATACGGAAAGGTCCAAGCCGACGT
AGCCACCGTCGTACGCCTACTGACCGATACCATCACGACCCTCGAACCTT
TCATTAACGGCGGCCTCGATGCTCACTGGACAGACGTCAACTTCCCCCCA
TCCAGCAACCCGGAAGCACAAGCTGCGGCTCGCCGTGTCCCTGATGTCGA
CCTCGTCCTGGACACAATGAAGGCATCCCTCAAGGACCTTCTGTCTTCCT
TCGGCCCTTACTTCAAGAACCTCGGCCTTGGAGCCAAGGACTTAAGATTG
GCCAAGGAAGCAGCCGGTGTCGTGGAAGAGGATCCCTTTAATTAA back to topCoding sequence (CDS) from alignment at An04:386018..388112- >CBS51388_003068-T1 ID=CBS51388_003068-T1|Name=CBS51388_003068-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5886bp|location=Sequence derived from alignment at An04:386018..388112- (Aspergillus niger CBS 513.88)
ACCTCACGAACGAGCAAGCTTAAACGAAAGAGCAATCTACCTTTATACCT
ACCACTTTCTCCTGGCAGTCGCGCAGTCAGTGGTTCATCTTTACTACGAC
TACGATCGCGTCCCTCTTCCCGTTGCCAGGAGGGTCGCTGGCTCCGCTGA
TGAAGATAGCCGGCAGGAGCAATCGATCTCTAAACGCCTCCAGTCAGCAT
TGCCGCAGCTCATCAAAGATGGGATGAAACGGAGTATCTTGGTTTCCATT
CTTTGCCCATTCGCATACGCCTTCGTCCTCCGGCGCCCGGCATGGAGCAC
TACACTGTACTTTGCAAAGCTATTCTGGGATTTCCCGAGATCCGCTGCAT
CCCCTCCCGGCATTATCCCGCCAATCCTCGGAGTTATCGTGCGAACCTTG
ATTTCAGGAGGCCTCCTGGTTCTCTGCTGGCAGACAGCTAACCTCTTTTT
CTCCGTGTTCCTCAGCAAAGAGCCGCTCAAGCGAGGCCAGCCCTTGACGG
CTGAAGCCAAGGATCCCAACGGCAGCTTGCTGAATGGACTAAAAGCAAAG
AAGGAAACCGTTCGCGCTTTTGCATTCTGGGAGCTGTACTTCATCAGTCA
GAGATTCCCTGACCGCCGGAAAGCCATCTTCAACGACATCGATCGCGAGG
AGGGTGCAGCTTGGTCGCAAATCCTGCAAGCCGCCACAGATGTCATCACG
GGCGTTACCACTCGCATCAGCGAGGCTAAGAATCCATCATCTGGCCCTAA
GCCTGCACCAGTCCAGCAGTCCGAGCCCGTCCTTCACTCCCTGCCACGGC
TGACGGACCCCCCTAAGGCGGACAACATCTTCGCTCCGTCCCCCAAGGCA
ACAACTCGCCAACAAAAGTTCGGCGAAGCCCTCACCACCACCGCCAGAGC
CTACGGCAACTCCCCAGACTGGACGCCTACCGCACGCGCCAAAGCCCGCG
ATGTCTTGGACCGCGCCTCCTCCGCCATGCTGAGCCCTGAACGCAAGCAG
AAGCTGCTCGGTTCCTCCCAGGAGCTCAAGATGCTCACCGCGCCATCAAC
TAGCAAGCCCGAGAACCTGCACCCCTTCCTCGCTCAGCTCCTCCGCTCTC
CACTAGGCCGACTCTTCCGCCAAACCTACGCTCGTCGCCTCTCCGGCATT
GTCCTCGGCACACCCCACGCCAACCTCTGCTCCGTCATCGACGCCACCGA
ATCCATCACCTGCCTTCTCATCAAGAGTCTCGCGGAGGACCAATACGGAA
AGGTCCAAGCCGACGTAGCCACCGTCGTACGCCTACTGACCGATACCATC
ACGACCCTCGAACCTTTCATTAACGGCGGCCTCGATGCTCACTGGACAGA
CGTCAACTTCCCCCCATCCAGCAACCCGGAAGCACAAGCTGCGGCTCGCC
GTGTCCCTGATGTCGACCTCGTCCTGGACACAATGAAGGCATCCCTCAAG
GACCTTCTGTCTTCCTTCGGCCCTTACTTCAAGAACCTCGGCCTTGGAGC
CAAGGACTTAAGATTGGCCAAGGAAGCAGCCGGTGTCGTGGAAGAGGATC
CCTTTAATTAATCTTGTGGGCTTGGTTCCCCATTGGAGGATGTGGAGTTC
GCACAGTTCTTCTCTTCCTCTGCAGTCTCGTTGTCTTCGTCCTCCGTGTT
GGTCAGATGCACATCGGTGCCAGGACAACCTCCTCCCCGCTTAGCACCTT
CAAATACCTCGTTCCCCTCGACGTTATACAGACTTTTGGCTGGTACTTGT
TCTCCGCCTGGTGGTTCACTGAAATCTACAGGTGGTCTTCTTCAAGTAGC
GCACACCTGGAATTGGTGAACCGAGCTAGATGGCTGCAGCACAGCCTCGC
CCGTATCGGCGCATCTTGACCTCTGCGCTGCACAGACGATTCGTTCATGC
GTCGGCACTGGCGCTTCTGGTCTGCTATGTAGTGGCATTTGCTATTGGCG
ATAAGTCATCTTACCTCACGAACGAGCAAGCTTAAACGAAAGAGCAATCT
ACCTTTATACCTACCACTTTCTCCTGGCAGTCGCGCAGTCAGTGGTTCAT
CTTTACTACGACTACGATCGCGTCCCTCTTCCCGTTGCCAGGAGGGTCGC
TGGCTCCGCTGATGAAGATAGCCGGCAGGAGCAATCGATCTCTAAACGCC
TCCAGTCAGCATTGCCGCAGCTCATCAAAGATGGGATGAAACGGAGTATC
TTGGTTTCCATTCTTTGCCCATTCGCATACGCCTTCGTCCTCCGGCGCCC
GGCATGGAGCACTACACTGTACTTTGCAAAGCTATTCTGGGATTTCCCGA
GATCCGCTGCATCCCCTCCCGGCATTATCCCGCCAATCCTCGGAGTTATC
GTGCGAACCTTGATTTCAGGAGGCCTCCTGGTTCTCTGCTGGCAGACAGC
TAACCTCTTTTTCTCCGTGTTCCTCAGCAAAGAGCCGCTCAAGCGAGGCC
AGCCCTTGACGGCTGAAGCCAAGGATCCCAACGGCAGCTTGCTGAATGGA
CTAAAAGCAAAGAAGGAAACCGTTCGCGCTTTTGCATTCTGGGAGCTGTA
CTTCATCAGTCAGAGATTCCCTGACCGCCGGAAAGCCATCTTCAACGACA
TCGATCGCGAGGAGGGTGCAGCTTGGTCGCAAATCCTGCAAGCCGCCACA
GATGTCATCACGGGCGTTACCACTCGCATCAGCGAGGCTAAGAATCCATC
ATCTGGCCCTAAGCCTGCACCAGTCCAGCAGTCCGAGCCCGTCCTTCACT
CCCTGCCACGGCTGACGGACCCCCCTAAGGCGGACAACATCTTCGCTCCG
TCCCCCAAGGCAACAACTCGCCAACAAAAGTTCGGCGAAGCCCTCACCAC
CACCGCCAGAGCCTACGGCAACTCCCCAGACTGGACGCCTACCGCACGCG
CCAAAGCCCGCGATGTCTTGGACCGCGCCTCCTCCGCCATGCTGAGCCCT
GAACGCAAGCAGAAGCTGCTCGGTTCCTCCCAGGAGCTCAAGATGCTCAC
CGCGCCATCAACTAGCAAGCCCGAGAACCTGCACCCCTTCCTCGCTCAGC
TCCTCCGCTCTCCACTAGGCCGACTCTTCCGCCAAACCTACGCTCGTCGC
CTCTCCGGCATTGTCCTCGGCACACCCCACGCCAACCTCTGCTCCGTCAT
CGACGCCACCGAATCCATCACCTGCCTTCTCATCAAGAGTCTCGCGGAGG
ACCAATACGGAAAGGTCCAAGCCGACGTAGCCACCGTCGTACGCCTACTG
ACCGATACCATCACGACCCTCGAACCTTTCATTAACGGCGGCCTCGATGC
TCACTGGACAGACGTCAACTTCCCCCCATCCAGCAACCCGGAAGCACAAG
CTGCGGCTCGCCGTGTCCCTGATGTCGACCTCGTCCTGGACACAATGAAG
GCATCCCTCAAGGACCTTCTGTCTTCCTTCGGCCCTTACTTCAAGAACCT
CGGCCTTGGAGCCAAGGACTTAAGATTGGCCAAGGAAGCAGCCGGTGTCG
TGGAAGAGGATCCCTTTAATTAATCTTGTGGGCTTGGTTCCCCATTGGAG
GATGTGGAGTTCGCACAGTTCTTCTCTTCCTCTGCAGTCTCGTTGTCTTC
GTCCTCCGTGTTGGTCAGATGCACATCGGTGCCAGGACAACCTCCTCCCC
GCTTAGCACCTTCAAATACCTCGTTCCCCTCGACGTTATACAGACTTTTG
GCTGGTACTTGTTCTCCGCCTGGTGGTTCACTGAAATCTACAGGTGGTCT
TCTTCAAGTAGCGCACACCTGGAATTGGTGAACCGAGCTAGATGGCTGCA
GCACAGCCTCGCCCGTATCGGCGCATCTTGACCTCTGCGCTGCACAGACG
ATTCGTTCATGCGTCGGCACTGGCGCTTCTGGTCTGCTATGTAGTGGCAT
TTGCTATTGGCGATAAGTCATCTTACCTCACGAACGAGCAAGCTTAAACG
AAAGAGCAATCTACCTTTATACCTACCACTTTCTCCTGGCAGTCGCGCAG
TCAGTGGTTCATCTTTACTACGACTACGATCGCGTCCCTCTTCCCGTTGC
CAGGAGGGTCGCTGGCTCCGCTGATGAAGATAGCCGGCAGGAGCAATCGA
TCTCTAAACGCCTCCAGTCAGCATTGCCGCAGCTCATCAAAGATGGGATG
AAACGGAGTATCTTGGTTTCCATTCTTTGCCCATTCGCATACGCCTTCGT
CCTCCGGCGCCCGGCATGGAGCACTACACTGTACTTTGCAAAGCTATTCT
GGGATTTCCCGAGATCCGCTGCATCCCCTCCCGGCATTATCCCGCCAATC
CTCGGAGTTATCGTGCGAACCTTGATTTCAGGAGGCCTCCTGGTTCTCTG
CTGGCAGACAGCTAACCTCTTTTTCTCCGTGTTCCTCAGCAAAGAGCCGC
TCAAGCGAGGCCAGCCCTTGACGGCTGAAGCCAAGGATCCCAACGGCAGC
TTGCTGAATGGACTAAAAGCAAAGAAGGAAACCGTTCGCGCTTTTGCATT
CTGGGAGCTGTACTTCATCAGTCAGAGATTCCCTGACCGCCGGAAAGCCA
TCTTCAACGACATCGATCGCGAGGAGGGTGCAGCTTGGTCGCAAATCCTG
CAAGCCGCCACAGATGTCATCACGGGCGTTACCACTCGCATCAGCGAGGC
TAAGAATCCATCATCTGGCCCTAAGCCTGCACCAGTCCAGCAGTCCGAGC
CCGTCCTTCACTCCCTGCCACGGCTGACGGACCCCCCTAAGGCGGACAAC
ATCTTCGCTCCGTCCCCCAAGGCAACAACTCGCCAACAAAAGTTCGGCGA
AGCCCTCACCACCACCGCCAGAGCCTACGGCAACTCCCCAGACTGGACGC
CTACCGCACGCGCCAAAGCCCGCGATGTCTTGGACCGCGCCTCCTCCGCC
ATGCTGAGCCCTGAACGCAAGCAGAAGCTGCTCGGTTCCTCCCAGGAGCT
CAAGATGCTCACCGCGCCATCAACTAGCAAGCCCGAGAACCTGCACCCCT
TCCTCGCTCAGCTCCTCCGCTCTCCACTAGGCCGACTCTTCCGCCAAACC
TACGCTCGTCGCCTCTCCGGCATTGTCCTCGGCACACCCCACGCCAACCT
CTGCTCCGTCATCGACGCCACCGAATCCATCACCTGCCTTCTCATCAAGA
GTCTCGCGGAGGACCAATACGGAAAGGTCCAAGCCGACGTAGCCACCGTC
GTACGCCTACTGACCGATACCATCACGACCCTCGAACCTTTCATTAACGG
CGGCCTCGATGCTCACTGGACAGACGTCAACTTCCCCCCATCCAGCAACC
CGGAAGCACAAGCTGCGGCTCGCCGTGTCCCTGATGTCGACCTCGTCCTG
GACACAATGAAGGCATCCCTCAAGGACCTTCTGTCTTCCTTCGGCCCTTA
CTTCAAGAACCTCGGCCTTGGAGCCAAGGACTTAAGATTGGCCAAGGAAG
CAGCCGGTGTCGTGGAAGAGGATCCCTTTAATTAATCTTGTGGGCTTGGT
TCCCCATTGGAGGATGTGGAGTTCGCACAGTTCTTCTCTTCCTCTGCAGT
CTCGTTGTCTTCGTCCTCCGTGTTGGTCAGATGCACATCGGTGCCAGGAC
AACCTCCTCCCCGCTTAGCACCTTCAAATACCTCGTTCCCCTCGACGTTA
TACAGACTTTTGGCTGGTACTTGTTCTCCGCCTGGTGGTTCACTGAAATC
TACAGGTGGTCTTCTTCAAGTAGCGCACACCTGGAATTGGTGAACCGAGC
TAGATGGCTGCAGCACAGCCTCGCCCGTATCGGCGCATCTTGACCTCTGC
GCTGCACAGACGATTCGTTCATGCGTCGGCACTGGCGCTTCTGGTCTGCT
ATGTAGTGGCATTTGCTATTGGCGATAAGTCATCTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019049 |
| DBxref | PFAM:PF09531 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:386018..388112 - |
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