|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:472690..473850- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003097-T1 ID=CBS51388_003097-T1|Name=CBS51388_003097-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1161bp|location=Sequence derived from alignment at An04:472690..473850- (Aspergillus niger CBS 513.88)
ATGGCGCAAGAACGTTCCGGAATCGTGGTCGGTCTGAACAAGGGCCACGT
ACGTTGTCCCCTGTCTTGAAGCTTGTTTTTAGTGTCCCGTTTTGTCTTTG
CGCGTGGAAAGATTTGGTCCGGTCGAGTCGTCGAGATTTCAAGCATGTGA
GCGGATTACGGAAAGGCACAACTTGGATGGGAAGAAATGAGGAAAATGCC
GGAAAATTGGGTGGAATTGAAGGATGATATGTCGGGAGAAGGGTCTTTTT
GTCTGCAATGCGGAGGAAGGATTCTTTTACAACTGCCCGACGATTCTTGC
TTGTTTCATTCGACATGGATGAGATTGGGAACTGGGAACTGAAATTGTCC
GACTCGGCTGGATCAAATCGGGACATGCTGCTTTGATATCTCCAATCATG
GAGAATTTCGCAATTGAAAGACAGAATGAAAATCAAGGACAACCGGACTA
ACATGTCTTTGATAACTTGCAGAAAACCACCCCCCTCAACACCCCCAAGA
CCCGGATCAGCCGTACCAAGGGCCAGTCTTCCCGCCGCACGGCCTTCGTT
CGTGAGATCGCCCGCGAGGTTGTCGGTCTTGCCCCCTATGAGCGTCGTAT
CATCGAACTCCTGAGAAACACTCAGGACAAGCGCGCTCGTAAGCTCGCCA
AGAAGAGAGTACGTTTGCCAGTGCCTTTACTATTCGGGGGAAGGATATGG
TTGGGAGGTTCGATTGTTTGCTTGTCCGCTTGCTCGCTCGTTCGGTTGTC
TGCTTGGCTCCGGTCCGTTGTCTATCTGCATCGTGTTCTTCGACATCACT
ACGATTACGCTTGATCGATAAGTACGACCTCATGAGCGTCATGACCGGTT
TATGTCTCAGAGAAGAGAACACAATCATTCGACAATCCATCCATCACCAA
AGGATCATGAATGCCATCCGGAGACGACAACTCAAACCAACGAAGCAAGC
AAAGTACCAACGACAGGACCATCGAGCACCCAAGCAAACAAGCAAGCAAT
TTGAACCACCGCCACATACCCCTCCGGCTCTTCACAACTCAAAACCACCT
GCTAACATATCTTTTTTCTCTACACAGCTCGGTACCTTCGGCCGTGGCAA
GAGAAAGGTCGAGGACATGCAGCGGGTCATCGCCGAGGCCCGCCGCACTG
GCGCTCACTAA back to topCoding sequence (CDS) from alignment at An04:472690..473850- >CBS51388_003097-T1 ID=CBS51388_003097-T1|Name=CBS51388_003097-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=954bp|location=Sequence derived from alignment at An04:472690..473850- (Aspergillus niger CBS 513.88)
CTCGGTACCTTCGGCCGTGGCAAGAGAAAGGTCGAGGACATGCAGCGGGT
CATCGCCGAGGCCCGCCGCACTGGCGCTCACTAAAAAACCACCCCCCTCA
ACACCCCCAAGACCCGGATCAGCCGTACCAAGGGCCAGTCTTCCCGCCGC
ACGGCCTTCGTTCGTGAGATCGCCCGCGAGGTTGTCGGTCTTGCCCCCTA
TGAGCGTCGTATCATCGAACTCCTGAGAAACACTCAGGACAAGCGCGCTC
GTAAGCTCGCCAAGAAGAGAATGGCGCAAGAACGTTCCGGAATCGTGGTC
GGTCTGAACAAGGGCCACCTCGGTACCTTCGGCCGTGGCAAGAGAAAGGT
CGAGGACATGCAGCGGGTCATCGCCGAGGCCCGCCGCACTGGCGCTCACT
AAAAAACCACCCCCCTCAACACCCCCAAGACCCGGATCAGCCGTACCAAG
GGCCAGTCTTCCCGCCGCACGGCCTTCGTTCGTGAGATCGCCCGCGAGGT
TGTCGGTCTTGCCCCCTATGAGCGTCGTATCATCGAACTCCTGAGAAACA
CTCAGGACAAGCGCGCTCGTAAGCTCGCCAAGAAGAGAATGGCGCAAGAA
CGTTCCGGAATCGTGGTCGGTCTGAACAAGGGCCACCTCGGTACCTTCGG
CCGTGGCAAGAGAAAGGTCGAGGACATGCAGCGGGTCATCGCCGAGGCCC
GCCGCACTGGCGCTCACTAAAAAACCACCCCCCTCAACACCCCCAAGACC
CGGATCAGCCGTACCAAGGGCCAGTCTTCCCGCCGCACGGCCTTCGTTCG
TGAGATCGCCCGCGAGGTTGTCGGTCTTGCCCCCTATGAGCGTCGTATCA
TCGAACTCCTGAGAAACACTCAGGACAAGCGCGCTCGTAAGCTCGCCAAG
AAGAGAATGGCGCAAGAACGTTCCGGAATCGTGGTCGGTCTGAACAAGGG
CCAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR038097 |
| DBxref | InterPro:IPR000509 |
| DBxref | PFAM:PF01158 |
| Product | 60S ribosomal protein L36 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:472690..473850 - |
|
