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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:490380..492324- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003102-T1 ID=CBS51388_003102-T1|Name=CBS51388_003102-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1945bp|location=Sequence derived from alignment at An04:490380..492324- (Aspergillus niger CBS 513.88)
ATGTCGTCTTTTTTCACCCTGCCCGCTTCGCAGCGGAAGCGCAAGAGAGA
AGACCGCGCTGGCGCCCCCGCGTCTAAGAAACGAGGTGTCGATGGAGACG
GAGATGCGGGCGCAAAGAGTGGCAAAAAGAAGACTAGGGAGCCGTCAGTT
TCGGGAAGCGACATTGATGAGGATGAGCTCAGTGGTGCCTCAGGGATATC
GGAGGAGGAAAGTGGCTCAGAATCCGACGAAGGAGAGACAGCCGGAGACC
GGAGATTGAAGCTTGCGGAGCGGTACCTGGAAAATGTCCGGGATGAAGTG
GAGGACTTTGGCTTTGACGCGGCCGAGATTGATCGTGACTTGATCGCAGA
GAGGCTGAAAGAGGATGTTGTAAGTACAAATCCTCCCATCCGGCTCCTGT
TCGGCTGGTCAGGCGTTTTACATGCAGAGCTGACGAGAGCTGCAGGATGA
ATTCAAAGGACGCGTTTATCGTCAGATTGCCTCCGATTTGGCCTTCTCGA
CGGCCTCCCATACCTTCTTCCGGGCAGATACGCAGTCAACTACGTCAATT
GCAGTCCATGCGCCGTATGTTTACACCGTTTCGAAGGACAAGACCTTGAT
TAAATGGGAACTCGCCACACCCACCTCCACGATTTCTACAACAAATGGAG
AGGAGTCCGAACGCCCTCCTCGCCCCCAGCGGAAGAAGCCAAAGCAGGTC
AGGTTTGTGCGGGGCTTGCGAAAGGTTGCGGAGACGGGAGAAGAGCATGG
ACATACCAAGAACATCTTGTCCGTCGCAGTGTCGCCGTCCGGAAAATTTG
TAGCCACGGGAGGAGAAGACCGGAAACTCATCGTCTGGGACGCGGAGACT
CTTACCCCCCTGAAGACCTTCACACAACATCGCGACGCTGTCAGTGGTCT
TGCCTTCGCTCGTCATATCTCTACCATGAGTTCTGGAGAGCAGCTCTTCT
CTGGCTCTTATGACCGGACCATCAAGACCTGGTCTCTGAGTACAGCCGGC
CATGCCTATGTTGAAACACTCTTCGGACATCAAGATCATGTTACGTCCGT
CGCCGCCATGGCCATCGATCAGTGTGTCAGTGTGGGAGCGCGCGATCGCA
CGGCCAGGTTGTGGAAGGTTATCGAGGAATCCCAACTGATCTTCCGTGGT
GGTTCTAAGAGCGCCTCCTATCAAGAGAACAACATTGACTGCGTATCGCC
GTTACCTCCTAACCACTTCGTTACTGGATCGGACTCAGGTTCCATCTCTC
TCTGGTCCATTCACAAGAAGAAGCCGCTTCACACGATCCCTCACGCACAC
GGCCTCGACCCCTTACCTCCACTGGACGAACTCTCCTCTGAAGTCAATCA
AGAAACCGCAGCACACAATTCCCGTCACCTCCGGCGCATGCCCCGCTGGA
TCACCGCTTTGACTACGCTTCCGGGCACAGACGTCGTACTTAGCGGCAGC
TGGGATGGCTTCATCCGGGCATGGAAGATCTCGGAAGACAAAAAGACCAT
TGTTCCTCTGGGCCCTATCGGAGCAGGATCCAGCATTCCGCTAACCCCCG
ACACCCCATCCGAGCAATTAAAGCAGACCCTTGCCTTCGACACACCGACG
AGCCCGGATCACATGGCAGTTGATGGTGCGCCGGCCCAGCAGACCGAGGA
GGAAGCAGAACCGCTGATCAAGGGTGTGATCAACGATATTGCTGTTTTCG
AGCGTCGCGCAGAAACCGCCAAACCAGGCCAAGCGCCAGCGGAACCCAAG
TCCAAGTCCAAGTCCAACACCAAGCCGTCTGCGCCCGAGCAACATGGGCT
CTGCATCGTAGCCGCTGTTGGCAAGGAACATCGGCTAGCAAGGTTCAAAT
GCTTCTCCAACAACTTCCATGACGGCCCCACCGCGGACGGTCGGAACGGT
GCCGTCGTGTTCGAAGTACCATTCATCTCCCAAAAATCGAAATGA back to topCoding sequence (CDS) from alignment at An04:490380..492324- >CBS51388_003102-T1 ID=CBS51388_003102-T1|Name=CBS51388_003102-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3738bp|location=Sequence derived from alignment at An04:490380..492324- (Aspergillus niger CBS 513.88)
GATGAATTCAAAGGACGCGTTTATCGTCAGATTGCCTCCGATTTGGCCTT
CTCGACGGCCTCCCATACCTTCTTCCGGGCAGATACGCAGTCAACTACGT
CAATTGCAGTCCATGCGCCGTATGTTTACACCGTTTCGAAGGACAAGACC
TTGATTAAATGGGAACTCGCCACACCCACCTCCACGATTTCTACAACAAA
TGGAGAGGAGTCCGAACGCCCTCCTCGCCCCCAGCGGAAGAAGCCAAAGC
AGGTCAGGTTTGTGCGGGGCTTGCGAAAGGTTGCGGAGACGGGAGAAGAG
CATGGACATACCAAGAACATCTTGTCCGTCGCAGTGTCGCCGTCCGGAAA
ATTTGTAGCCACGGGAGGAGAAGACCGGAAACTCATCGTCTGGGACGCGG
AGACTCTTACCCCCCTGAAGACCTTCACACAACATCGCGACGCTGTCAGT
GGTCTTGCCTTCGCTCGTCATATCTCTACCATGAGTTCTGGAGAGCAGCT
CTTCTCTGGCTCTTATGACCGGACCATCAAGACCTGGTCTCTGAGTACAG
CCGGCCATGCCTATGTTGAAACACTCTTCGGACATCAAGATCATGTTACG
TCCGTCGCCGCCATGGCCATCGATCAGTGTGTCAGTGTGGGAGCGCGCGA
TCGCACGGCCAGGTTGTGGAAGGTTATCGAGGAATCCCAACTGATCTTCC
GTGGTGGTTCTAAGAGCGCCTCCTATCAAGAGAACAACATTGACTGCGTA
TCGCCGTTACCTCCTAACCACTTCGTTACTGGATCGGACTCAGGTTCCAT
CTCTCTCTGGTCCATTCACAAGAAGAAGCCGCTTCACACGATCCCTCACG
CACACGGCCTCGACCCCTTACCTCCACTGGACGAACTCTCCTCTGAAGTC
AATCAAGAAACCGCAGCACACAATTCCCGTCACCTCCGGCGCATGCCCCG
CTGGATCACCGCTTTGACTACGCTTCCGGGCACAGACGTCGTACTTAGCG
GCAGCTGGGATGGCTTCATCCGGGCATGGAAGATCTCGGAAGACAAAAAG
ACCATTGTTCCTCTGGGCCCTATCGGAGCAGGATCCAGCATTCCGCTAAC
CCCCGACACCCCATCCGAGCAATTAAAGCAGACCCTTGCCTTCGACACAC
CGACGAGCCCGGATCACATGGCAGTTGATGGTGCGCCGGCCCAGCAGACC
GAGGAGGAAGCAGAACCGCTGATCAAGGGTGTGATCAACGATATTGCTGT
TTTCGAGCGTCGCGCAGAAACCGCCAAACCAGGCCAAGCGCCAGCGGAAC
CCAAGTCCAAGTCCAAGTCCAACACCAAGCCGTCTGCGCCCGAGCAACAT
GGGCTCTGCATCGTAGCCGCTGTTGGCAAGGAACATCGGCTAGCAAGGTT
CAAATGCTTCTCCAACAACTTCCATGACGGCCCCACCGCGGACGGTCGGA
ACGGTGCCGTCGTGTTCGAAGTACCATTCATCTCCCAAAAATCGAAATGA
ATGTCGTCTTTTTTCACCCTGCCCGCTTCGCAGCGGAAGCGCAAGAGAGA
AGACCGCGCTGGCGCCCCCGCGTCTAAGAAACGAGGTGTCGATGGAGACG
GAGATGCGGGCGCAAAGAGTGGCAAAAAGAAGACTAGGGAGCCGTCAGTT
TCGGGAAGCGACATTGATGAGGATGAGCTCAGTGGTGCCTCAGGGATATC
GGAGGAGGAAAGTGGCTCAGAATCCGACGAAGGAGAGACAGCCGGAGACC
GGAGATTGAAGCTTGCGGAGCGGTACCTGGAAAATGTCCGGGATGAAGTG
GAGGACTTTGGCTTTGACGCGGCCGAGATTGATCGTGACTTGATCGCAGA
GAGGCTGAAAGAGGATGTTGATGAATTCAAAGGACGCGTTTATCGTCAGA
TTGCCTCCGATTTGGCCTTCTCGACGGCCTCCCATACCTTCTTCCGGGCA
GATACGCAGTCAACTACGTCAATTGCAGTCCATGCGCCGTATGTTTACAC
CGTTTCGAAGGACAAGACCTTGATTAAATGGGAACTCGCCACACCCACCT
CCACGATTTCTACAACAAATGGAGAGGAGTCCGAACGCCCTCCTCGCCCC
CAGCGGAAGAAGCCAAAGCAGGTCAGGTTTGTGCGGGGCTTGCGAAAGGT
TGCGGAGACGGGAGAAGAGCATGGACATACCAAGAACATCTTGTCCGTCG
CAGTGTCGCCGTCCGGAAAATTTGTAGCCACGGGAGGAGAAGACCGGAAA
CTCATCGTCTGGGACGCGGAGACTCTTACCCCCCTGAAGACCTTCACACA
ACATCGCGACGCTGTCAGTGGTCTTGCCTTCGCTCGTCATATCTCTACCA
TGAGTTCTGGAGAGCAGCTCTTCTCTGGCTCTTATGACCGGACCATCAAG
ACCTGGTCTCTGAGTACAGCCGGCCATGCCTATGTTGAAACACTCTTCGG
ACATCAAGATCATGTTACGTCCGTCGCCGCCATGGCCATCGATCAGTGTG
TCAGTGTGGGAGCGCGCGATCGCACGGCCAGGTTGTGGAAGGTTATCGAG
GAATCCCAACTGATCTTCCGTGGTGGTTCTAAGAGCGCCTCCTATCAAGA
GAACAACATTGACTGCGTATCGCCGTTACCTCCTAACCACTTCGTTACTG
GATCGGACTCAGGTTCCATCTCTCTCTGGTCCATTCACAAGAAGAAGCCG
CTTCACACGATCCCTCACGCACACGGCCTCGACCCCTTACCTCCACTGGA
CGAACTCTCCTCTGAAGTCAATCAAGAAACCGCAGCACACAATTCCCGTC
ACCTCCGGCGCATGCCCCGCTGGATCACCGCTTTGACTACGCTTCCGGGC
ACAGACGTCGTACTTAGCGGCAGCTGGGATGGCTTCATCCGGGCATGGAA
GATCTCGGAAGACAAAAAGACCATTGTTCCTCTGGGCCCTATCGGAGCAG
GATCCAGCATTCCGCTAACCCCCGACACCCCATCCGAGCAATTAAAGCAG
ACCCTTGCCTTCGACACACCGACGAGCCCGGATCACATGGCAGTTGATGG
TGCGCCGGCCCAGCAGACCGAGGAGGAAGCAGAACCGCTGATCAAGGGTG
TGATCAACGATATTGCTGTTTTCGAGCGTCGCGCAGAAACCGCCAAACCA
GGCCAAGCGCCAGCGGAACCCAAGTCCAAGTCCAAGTCCAACACCAAGCC
GTCTGCGCCCGAGCAACATGGGCTCTGCATCGTAGCCGCTGTTGGCAAGG
AACATCGGCTAGCAAGGTTCAAATGCTTCTCCAACAACTTCCATGACGGC
CCCACCGCGGACGGTCGGAACGGTGCCGTCGTGTTCGAAGTACCATTCAT
CTCCCAAAAATCGAAATGAATGTCGTCTTTTTTCACCCTGCCCGCTTCGC
AGCGGAAGCGCAAGAGAGAAGACCGCGCTGGCGCCCCCGCGTCTAAGAAA
CGAGGTGTCGATGGAGACGGAGATGCGGGCGCAAAGAGTGGCAAAAAGAA
GACTAGGGAGCCGTCAGTTTCGGGAAGCGACATTGATGAGGATGAGCTCA
GTGGTGCCTCAGGGATATCGGAGGAGGAAAGTGGCTCAGAATCCGACGAA
GGAGAGACAGCCGGAGACCGGAGATTGAAGCTTGCGGAGCGGTACCTGGA
AAATGTCCGGGATGAAGTGGAGGACTTTGGCTTTGACGCGGCCGAGATTG
ATCGTGACTTGATCGCAGAGAGGCTGAAAGAGGATGTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:490380..492324 - |
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