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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:786532..787415- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003218-T1 ID=CBS51388_003218-T1|Name=CBS51388_003218-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=884bp|location=Sequence derived from alignment at An04:786532..787415- (Aspergillus niger CBS 513.88)
ATGTCCTCCCTCAACCAAGACCAAATCAAAACCCTCGAACAATCCCGCCA
ACGCCTCATCCAACTCACCCATTCCCTCGCCTCTCTCATAACCAGTCTCA
ATCAAAGCGATCCTCTCCCCTCCTGGTATATATACCCCCCCAATGCCCAC
TCCATCCAGCCCACCCGGGTCAACCTTACTGATATGATGATACGGACAGG
ACATCCCTCCAATCCCAAGCAACCATCATCTCCAACAACCTCCTCACCAT
CTCCGACCACCTCTCCGATAACCGCGACCTCCTATCCAACATCGTCGCCT
ACCCCGACGCATCTTATCCGTCGCGCGTCCCCGCTAATAACGTCGCCCTC
GAGCAAGTCCTGCGCACGAAACTAGATCCCCGCGTTGAGGATTGGGTAGC
GCGCGGTCGTCGCGCCGGGGCGCCAACTACTTCTTCTGATGCTGGAGCCG
GAGCACTGGGACAATACCAGACCAGCAGTGGACAGAGATTATTGAGTGAT
GATGCGATTGCTGAATTGTGGGATTGGGCGCCTGTCGCGGCGAATGAGGA
GGCCAGGAAGAGGAATTGGGGCGGCAATTATACGTTGGAGGAGCGGGAGA
TGGGGATTGAGAATGTAGTTACGGGGTTGAGCAGGGTGTTGGAGGATGAT
GATGAGGAGGATGAGAGTGATAGTGAAGAGGGAGAGGGCGAGGCGGATGA
GATGGAGGTTGTCGGGGCAAGGAGAAGGTCCGGGGCTGGAGCTGGGCTGG
AGTTCGATATTGCTGCTGCGAATACTGGGTCTGGGGCTAATGCTGGTGCG
GGGGCTAAGGTGGTTGCGCCTGTGGTGCCATTGGATGAGATTCTGAGGTT
CATGACTACGGGGGCTGTGCCGGGACAGCGGTGA back to topCoding sequence (CDS) from alignment at An04:786532..787415- >CBS51388_003218-T1 ID=CBS51388_003218-T1|Name=CBS51388_003218-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1620bp|location=Sequence derived from alignment at An04:786532..787415- (Aspergillus niger CBS 513.88)
GACATCCCTCCAATCCCAAGCAACCATCATCTCCAACAACCTCCTCACCA
TCTCCGACCACCTCTCCGATAACCGCGACCTCCTATCCAACATCGTCGCC
TACCCCGACGCATCTTATCCGTCGCGCGTCCCCGCTAATAACGTCGCCCT
CGAGCAAGTCCTGCGCACGAAACTAGATCCCCGCGTTGAGGATTGGGTAG
CGCGCGGTCGTCGCGCCGGGGCGCCAACTACTTCTTCTGATGCTGGAGCC
GGAGCACTGGGACAATACCAGACCAGCAGTGGACAGAGATTATTGAGTGA
TGATGCGATTGCTGAATTGTGGGATTGGGCGCCTGTCGCGGCGAATGAGG
AGGCCAGGAAGAGGAATTGGGGCGGCAATTATACGTTGGAGGAGCGGGAG
ATGGGGATTGAGAATGTAGTTACGGGGTTGAGCAGGGTGTTGGAGGATGA
TGATGAGGAGGATGAGAGTGATAGTGAAGAGGGAGAGGGCGAGGCGGATG
AGATGGAGGTTGTCGGGGCAAGGAGAAGGTCCGGGGCTGGAGCTGGGCTG
GAGTTCGATATTGCTGCTGCGAATACTGGGTCTGGGGCTAATGCTGGTGC
GGGGGCTAAGGTGGTTGCGCCTGTGGTGCCATTGGATGAGATTCTGAGGT
TCATGACTACGGGGGCTGTGCCGGGACAGCGGTGAATGTCCTCCCTCAAC
CAAGACCAAATCAAAACCCTCGAACAATCCCGCCAACGCCTCATCCAACT
CACCCATTCCCTCGCCTCTCTCATAACCAGTCTCAATCAAAGCGATCCTC
TCCCCTCCTGGACATCCCTCCAATCCCAAGCAACCATCATCTCCAACAAC
CTCCTCACCATCTCCGACCACCTCTCCGATAACCGCGACCTCCTATCCAA
CATCGTCGCCTACCCCGACGCATCTTATCCGTCGCGCGTCCCCGCTAATA
ACGTCGCCCTCGAGCAAGTCCTGCGCACGAAACTAGATCCCCGCGTTGAG
GATTGGGTAGCGCGCGGTCGTCGCGCCGGGGCGCCAACTACTTCTTCTGA
TGCTGGAGCCGGAGCACTGGGACAATACCAGACCAGCAGTGGACAGAGAT
TATTGAGTGATGATGCGATTGCTGAATTGTGGGATTGGGCGCCTGTCGCG
GCGAATGAGGAGGCCAGGAAGAGGAATTGGGGCGGCAATTATACGTTGGA
GGAGCGGGAGATGGGGATTGAGAATGTAGTTACGGGGTTGAGCAGGGTGT
TGGAGGATGATGATGAGGAGGATGAGAGTGATAGTGAAGAGGGAGAGGGC
GAGGCGGATGAGATGGAGGTTGTCGGGGCAAGGAGAAGGTCCGGGGCTGG
AGCTGGGCTGGAGTTCGATATTGCTGCTGCGAATACTGGGTCTGGGGCTA
ATGCTGGTGCGGGGGCTAAGGTGGTTGCGCCTGTGGTGCCATTGGATGAG
ATTCTGAGGTTCATGACTACGGGGGCTGTGCCGGGACAGCGGTGAATGTC
CTCCCTCAACCAAGACCAAATCAAAACCCTCGAACAATCCCGCCAACGCC
TCATCCAACTCACCCATTCCCTCGCCTCTCTCATAACCAGTCTCAATCAA
AGCGATCCTCTCCCCTCCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003712 | transcription coregulator activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription by RNA polymerase II |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019364 |
| DBxref | PFAM:PF10232 |
| Product | mediator of RNA polymerase II transcription subunit 8 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:786532..787415 - |
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