You are here

Home

CBS51388_003321-T1, CBS51388_003321-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003321-T1
Unique NameCBS51388_003321-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:1123692..1125557+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003321-T1 ID=CBS51388_003321-T1|Name=CBS51388_003321-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1866bp|location=Sequence derived from alignment at An04:1123692..1125557+ (Aspergillus niger CBS 513.88)
ATGTCCAAAGCTAACACCCGGGCAGTCCCCTGGACTTCCCATCTCATCTA
CCTCCTCCTTACTCTCCCCACTGCCCTCAGCATCACCCTCCTGCTCAGCG
ACTCTCAGCACTGGACCCTTACGGGCGACCTCTACACCTTCATCAACCGC
TACCGCACGACCGTGCAAACGGCCCTTCAGGTCCTAGCCACTCTCCTCGG
CGCTATTCAAATATACAGCATCTGCCGCCTCATCAACCACGCCACTCGCA
TCTTTTTCAAACACTCCACCCACCACACGACCCTCAACGACCTCGCCCTC
TGGTCCGCCCTCTCCACCCCAACTACCAACTTCACCCTTCCTCTACCCCA
GATTCTCCTCACTCTCCTCCTCGCCAACCTTTCCGCTGTCCTCTCCGCCC
TCTGGACCGGCGCCCTCACCCCAACCTCCACCACAACCACCGCCAATACC
ACCATCCTCATCCCCTCCTACGCCAACCGTTCCTTCATCAAAGAATATCC
CTCCCAGATCGACACCACCGGTCCCTCCCTCCGCACCTCCCTCGGCTACT
TCACCTACTCCGTCGGCGTCGGCCTCCTCACTTCCCTCGTCTCCTCCGCC
TCCACCGCCTCCCCACTCACCGGTTCCCTCCGCGCCCGCTCCCACGCCAA
ACTCGACTCTACAGGCTACTCGTACTCCGGCCGCTCCTATGGCGTCGGCA
GTCCTGTCGGTCTCGCTGACGAAAATGTCATTTCGTTTTACCCATACGCA
GCCAACTACACCTACCACGAACGCGGCTATCTCGCCCACGTCTCCTGTCT
ATATAACTCCTCCTCTCTCTTCCTCCTGGAAGATACCTACGACACAGCCC
TATATGTTGCCAAAGGCCCGCTACCGGACAGTAACGTCTCCTCGGGCGAG
TACTCCACCTACACGGGGTGGTCGACAGACACGATCGTAGCCCTGGGCGT
AGCCAGCCAGCCAGCGGCATACACAAAGGAGAGGTACGTCGCAGCGGCAG
CGGGGAGTTACTATGCGTCGTTGAACGCGAGTCAATGCCTAATCAGCTTC
GTACCAAGCTGGTTCATCGTGAACGTGGGTATTCAGGAGAAAGTGGTGGA
TGTGGTACCGCTGAACAACACCACCTCTTATCCAGAAGAAGACACCGACA
TAGACATCGACCCCACCAACAAAACCATCCACGTCGCCATGCGCCAGCTC
GAACTCATCTCCAACGACCTCACCTCCTTCTACCGCTCCACGCTCGGCGA
CGCATTCAACACCTCCATCGCGGATCACGCCACAAACACCAACACCACCG
CCACCATTTCCTCGAACTTCACCACCACCACAACATCAAACTCCACTGAC
AATGAAACAACAACCCTGACAGCCATTCAAAACACCTATATCTCCCTCAT
CGACGACATTCTTGCCGCGTATGCCTCTGCGCAGCTCATAGTGGGGAATT
TCTCTCGCCCCGCGACGGCAACGGTTACGATTGATGCGTTGCGTCTGGGT
TCGAGGGTGTATATTGTCGCGGTATTTGTGGTTAATGTACTTGTGGTGCT
GGGGGTTGGGTTCGAGATGGGACGGACAGGTGCGTGGAAGGCCCTGCCTG
GGTTTGATTATTTGGATGCGAGGATGTTGGTGCTGGGAGGTGCGAATGGG
GGGAGAGGAATCGCGGAGAGGGCGGCGGATGTGGGGTGGAAGGGGTTGGA
AACGGGGAAGATTGGGGTCAGGCTTGTTGGGGTTGGTGGGGCGAGGGGGG
TAGGGTGGGGGTTGGTTTATGGGAATCGTAGTAGGAGTAAGGGTGATGGT
GGTGGTGAGAAGGGGAGGGAAGGAAGGAGAGCGTCACAGGAGACGTTGGT
GGAGGGGTGGATTTGA
back to top

Coding sequence (CDS) from alignment at An04:1123692..1125557+

>CBS51388_003321-T1 ID=CBS51388_003321-T1|Name=CBS51388_003321-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1866bp|location=Sequence derived from alignment at An04:1123692..1125557+ (Aspergillus niger CBS 513.88)
ATGTCCAAAGCTAACACCCGGGCAGTCCCCTGGACTTCCCATCTCATCTA
CCTCCTCCTTACTCTCCCCACTGCCCTCAGCATCACCCTCCTGCTCAGCG
ACTCTCAGCACTGGACCCTTACGGGCGACCTCTACACCTTCATCAACCGC
TACCGCACGACCGTGCAAACGGCCCTTCAGGTCCTAGCCACTCTCCTCGG
CGCTATTCAAATATACAGCATCTGCCGCCTCATCAACCACGCCACTCGCA
TCTTTTTCAAACACTCCACCCACCACACGACCCTCAACGACCTCGCCCTC
TGGTCCGCCCTCTCCACCCCAACTACCAACTTCACCCTTCCTCTACCCCA
GATTCTCCTCACTCTCCTCCTCGCCAACCTTTCCGCTGTCCTCTCCGCCC
TCTGGACCGGCGCCCTCACCCCAACCTCCACCACAACCACCGCCAATACC
ACCATCCTCATCCCCTCCTACGCCAACCGTTCCTTCATCAAAGAATATCC
CTCCCAGATCGACACCACCGGTCCCTCCCTCCGCACCTCCCTCGGCTACT
TCACCTACTCCGTCGGCGTCGGCCTCCTCACTTCCCTCGTCTCCTCCGCC
TCCACCGCCTCCCCACTCACCGGTTCCCTCCGCGCCCGCTCCCACGCCAA
ACTCGACTCTACAGGCTACTCGTACTCCGGCCGCTCCTATGGCGTCGGCA
GTCCTGTCGGTCTCGCTGACGAAAATGTCATTTCGTTTTACCCATACGCA
GCCAACTACACCTACCACGAACGCGGCTATCTCGCCCACGTCTCCTGTCT
ATATAACTCCTCCTCTCTCTTCCTCCTGGAAGATACCTACGACACAGCCC
TATATGTTGCCAAAGGCCCGCTACCGGACAGTAACGTCTCCTCGGGCGAG
TACTCCACCTACACGGGGTGGTCGACAGACACGATCGTAGCCCTGGGCGT
AGCCAGCCAGCCAGCGGCATACACAAAGGAGAGGTACGTCGCAGCGGCAG
CGGGGAGTTACTATGCGTCGTTGAACGCGAGTCAATGCCTAATCAGCTTC
GTACCAAGCTGGTTCATCGTGAACGTGGGTATTCAGGAGAAAGTGGTGGA
TGTGGTACCGCTGAACAACACCACCTCTTATCCAGAAGAAGACACCGACA
TAGACATCGACCCCACCAACAAAACCATCCACGTCGCCATGCGCCAGCTC
GAACTCATCTCCAACGACCTCACCTCCTTCTACCGCTCCACGCTCGGCGA
CGCATTCAACACCTCCATCGCGGATCACGCCACAAACACCAACACCACCG
CCACCATTTCCTCGAACTTCACCACCACCACAACATCAAACTCCACTGAC
AATGAAACAACAACCCTGACAGCCATTCAAAACACCTATATCTCCCTCAT
CGACGACATTCTTGCCGCGTATGCCTCTGCGCAGCTCATAGTGGGGAATT
TCTCTCGCCCCGCGACGGCAACGGTTACGATTGATGCGTTGCGTCTGGGT
TCGAGGGTGTATATTGTCGCGGTATTTGTGGTTAATGTACTTGTGGTGCT
GGGGGTTGGGTTCGAGATGGGACGGACAGGTGCGTGGAAGGCCCTGCCTG
GGTTTGATTATTTGGATGCGAGGATGTTGGTGCTGGGAGGTGCGAATGGG
GGGAGAGGAATCGCGGAGAGGGCGGCGGATGTGGGGTGGAAGGGGTTGGA
AACGGGGAAGATTGGGGTCAGGCTTGTTGGGGTTGGTGGGGCGAGGGGGG
TAGGGTGGGGGTTGGTTTATGGGAATCGTAGTAGGAGTAAGGGTGATGGT
GGTGGTGAGAAGGGGAGGGAAGGAAGGAGAGCGTCACAGGAGACGTTGGT
GGAGGGGTGGATTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003321CBS51388_003321Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003321-T1.exon1CBS51388_003321-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003321-T1.cdsCBS51388_003321-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003321-T1CBS51388_003321-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-27)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:1123692..1125557 +
Powered by Drupal