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CBS51388_003350-T1, CBS51388_003350-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003350-T1
Unique NameCBS51388_003350-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:1199480..1201807+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003350-T1 ID=CBS51388_003350-T1|Name=CBS51388_003350-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2328bp|location=Sequence derived from alignment at An04:1199480..1201807+ (Aspergillus niger CBS 513.88)
ATGGAGTCCCCCTCGTCCTCGCCATACGCCGGCCAGAAACGCAAAATCGC
CGACATGAGCTCCGATGAAGAGGAAGAAGAAGATTACCGCCCAACCATGG
GCTTTCGCGGTTTTGCTCGCGCGTCGTCTCGCTCTGAGTCGCCTCCTTCT
CACGGCGGGCTAGGAAGCTCTCGTCGCAATCCTCGGAACAACACCGCGCA
GTCAGCGATGAAAGGCGGAGGCAACAATGCTGGCAAAGGAATGTCCGGAG
GCAACTCCTTCGCCGCGCGCATGATGGCCAAGATGGGTTACGTCGAGGGA
CAGGGTTTGGGTTCTTCCGGTCAAGGTATCGTCAACCCGATCGAGGCCCA
GGCTCGTCCTACAGGTGCCGGTCTGGGTGCGGTCCGTGAGAAGACAAAGC
AAGCGCGAGAAGAGGAAAAGCGGGCAGCAGCTCTCCGGGGCGAGTCCGTC
GAGGATAGCTCAGATGAAGAGCGCAAGAGGCGACGGAAAAAGAAGGAGGA
GCGTAAACGAGAGGGCCGGAGCGGGACCGGGACACCAGTGGCTCGCGCGA
AGCCCCAGTTCCGAACTGCGCGCGAGATGGAAAAGGATATGGAGGGCTTG
GAAGTTCCGAACGTGCTAAAGTCGCTTATCGATGCGACCGGGAAGGACCA
GAAGGTGCTCACGTCTACAGCTGGTCTGATGACGCCGCAAACATTCGTTA
CTCAAGGCGAGGGAGAAGCCTGGAAAATCGCGCAACGTGCTCGGAACGAC
CTAGAGGCGTTTGCAGACGAGTGGAAGGGTCTGACAGAGCGGAAAAAATA
CATCGAGCTAGAGGAAGCCCAGGTCGTGGAACAACTTGATACAAATCAGC
TCAAGGTCGACCAGCTGTCTGAGCTCGTCACAGCCATCGGGCAACTAGAG
ATCTTCCAGAAGGAAGACACTCGAGCAAAGTTCGACGAAATCACCGATAA
GCTGGAGTCCATGGAGATCAAGTACCGCAGCGAGATTGATGAATACCGAC
TGCCAGAAACGGCCGTCGCAGCCATCCATCCTCTTTTCCGCCAAGCGATG
GAAGAATGGGAGCCTCTCAGGGACCCGACGTTCCTCGTATCCAACCTCCG
TCGTCTCCAGCCCCTACTCCTTCGAAAGGCCAACAACGAGCACACCCAGC
GACAATCCACCTCCCCCTATGAGACCATGATCTACACCTTATGGCTGCCC
CGCGTGCGCTCCGCCCTCCTCAACGACTGGGACGTATACGAGCCCGCCCC
AGCAACCTCCCTTATAGTCGCCTGGAAAGAGCTCCTCCCCCCCTTCGTCT
ACACCAACGTCCTCGACCAACTCGTCGTACCGAAGCTCTCTAACGGCCTG
AAAGAATGGAAACCCCGAAGCAGCAGCCGCCGTCACCACAACTCATCCTC
CAACAGCTCCCGCTTCCCCTGGTGGCTCTTCACTTGGCTCCAATACCTCG
ACGAGCGGCACACCAACCCCAAGCAACCCACGGGCCTACTCTCCGACGCG
AAGCGCAAATTCCGCGTCGTCCTCGACAGCTGGGACCTCAACAAGGGGCT
GATCAACGGCATCGAACTCTGGCGCGACGCCCTAGGCTCCGAATTCGACA
TCTGTCTCCGCAACCACCTCCTCCCCCGCCTAGGCCGCCACCTCCGCGAA
GACTTCGAAGTCAACCCGCAAGACCAAGACCTCACGGCCCTCGAAAACGT
CCTGAAATGGAAAGACTTCTTTAAACTCAACGTCATGGGTCTTCTCCTCG
TCGCCGAATTCTTCCCGAAATGGCACAACATCCTCTACATCTGGCTCACC
AACGACCCCAACTACGAAGAAGTCGCCGAATGGTTCACCTGGTGGCGCAC
CCAAATCCCCACCGATATCAACGACCTCACTATCGTCGATGATGAATGGA
ACAAGGGTCTCCAAACTATGGACCTCGCCTCCCAACTCGGCGACCGTGCC
GCTGCTGAACTTCCTCCTCCTTCATCTACCACCGAACACCCCTCAACAAC
CAAACCCACCGCCACGACAACAGCGGCAGAACAAGAAAAACAACAACAAC
AACAATCCCGCAAACCCAAAATCATCGAAGAAGTCGCCTTCAAAGATATT
CTTGAATCCTGGTGCATGGAACAAGGCCTCATCATGCTGCCGTTGCGTGA
AGCGCATCCGCAAAACGGTCAGCCTCTGTTCCGCATTACGGCTAGCGCGA
CGGGTAAGGGAGGTGTTGTGGCGTTCGTGCAGGGTGATGTGGTCTGGGTG
CAGAATAAGAAGGCTAAGGAGATGTGGGAGCCTATGGGGTTGGAGGATCA
GTTGGTGGAGAGAGCGGAGGGGAGGTAG
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Coding sequence (CDS) from alignment at An04:1199480..1201807+

>CBS51388_003350-T1 ID=CBS51388_003350-T1|Name=CBS51388_003350-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2328bp|location=Sequence derived from alignment at An04:1199480..1201807+ (Aspergillus niger CBS 513.88)
ATGGAGTCCCCCTCGTCCTCGCCATACGCCGGCCAGAAACGCAAAATCGC
CGACATGAGCTCCGATGAAGAGGAAGAAGAAGATTACCGCCCAACCATGG
GCTTTCGCGGTTTTGCTCGCGCGTCGTCTCGCTCTGAGTCGCCTCCTTCT
CACGGCGGGCTAGGAAGCTCTCGTCGCAATCCTCGGAACAACACCGCGCA
GTCAGCGATGAAAGGCGGAGGCAACAATGCTGGCAAAGGAATGTCCGGAG
GCAACTCCTTCGCCGCGCGCATGATGGCCAAGATGGGTTACGTCGAGGGA
CAGGGTTTGGGTTCTTCCGGTCAAGGTATCGTCAACCCGATCGAGGCCCA
GGCTCGTCCTACAGGTGCCGGTCTGGGTGCGGTCCGTGAGAAGACAAAGC
AAGCGCGAGAAGAGGAAAAGCGGGCAGCAGCTCTCCGGGGCGAGTCCGTC
GAGGATAGCTCAGATGAAGAGCGCAAGAGGCGACGGAAAAAGAAGGAGGA
GCGTAAACGAGAGGGCCGGAGCGGGACCGGGACACCAGTGGCTCGCGCGA
AGCCCCAGTTCCGAACTGCGCGCGAGATGGAAAAGGATATGGAGGGCTTG
GAAGTTCCGAACGTGCTAAAGTCGCTTATCGATGCGACCGGGAAGGACCA
GAAGGTGCTCACGTCTACAGCTGGTCTGATGACGCCGCAAACATTCGTTA
CTCAAGGCGAGGGAGAAGCCTGGAAAATCGCGCAACGTGCTCGGAACGAC
CTAGAGGCGTTTGCAGACGAGTGGAAGGGTCTGACAGAGCGGAAAAAATA
CATCGAGCTAGAGGAAGCCCAGGTCGTGGAACAACTTGATACAAATCAGC
TCAAGGTCGACCAGCTGTCTGAGCTCGTCACAGCCATCGGGCAACTAGAG
ATCTTCCAGAAGGAAGACACTCGAGCAAAGTTCGACGAAATCACCGATAA
GCTGGAGTCCATGGAGATCAAGTACCGCAGCGAGATTGATGAATACCGAC
TGCCAGAAACGGCCGTCGCAGCCATCCATCCTCTTTTCCGCCAAGCGATG
GAAGAATGGGAGCCTCTCAGGGACCCGACGTTCCTCGTATCCAACCTCCG
TCGTCTCCAGCCCCTACTCCTTCGAAAGGCCAACAACGAGCACACCCAGC
GACAATCCACCTCCCCCTATGAGACCATGATCTACACCTTATGGCTGCCC
CGCGTGCGCTCCGCCCTCCTCAACGACTGGGACGTATACGAGCCCGCCCC
AGCAACCTCCCTTATAGTCGCCTGGAAAGAGCTCCTCCCCCCCTTCGTCT
ACACCAACGTCCTCGACCAACTCGTCGTACCGAAGCTCTCTAACGGCCTG
AAAGAATGGAAACCCCGAAGCAGCAGCCGCCGTCACCACAACTCATCCTC
CAACAGCTCCCGCTTCCCCTGGTGGCTCTTCACTTGGCTCCAATACCTCG
ACGAGCGGCACACCAACCCCAAGCAACCCACGGGCCTACTCTCCGACGCG
AAGCGCAAATTCCGCGTCGTCCTCGACAGCTGGGACCTCAACAAGGGGCT
GATCAACGGCATCGAACTCTGGCGCGACGCCCTAGGCTCCGAATTCGACA
TCTGTCTCCGCAACCACCTCCTCCCCCGCCTAGGCCGCCACCTCCGCGAA
GACTTCGAAGTCAACCCGCAAGACCAAGACCTCACGGCCCTCGAAAACGT
CCTGAAATGGAAAGACTTCTTTAAACTCAACGTCATGGGTCTTCTCCTCG
TCGCCGAATTCTTCCCGAAATGGCACAACATCCTCTACATCTGGCTCACC
AACGACCCCAACTACGAAGAAGTCGCCGAATGGTTCACCTGGTGGCGCAC
CCAAATCCCCACCGATATCAACGACCTCACTATCGTCGATGATGAATGGA
ACAAGGGTCTCCAAACTATGGACCTCGCCTCCCAACTCGGCGACCGTGCC
GCTGCTGAACTTCCTCCTCCTTCATCTACCACCGAACACCCCTCAACAAC
CAAACCCACCGCCACGACAACAGCGGCAGAACAAGAAAAACAACAACAAC
AACAATCCCGCAAACCCAAAATCATCGAAGAAGTCGCCTTCAAAGATATT
CTTGAATCCTGGTGCATGGAACAAGGCCTCATCATGCTGCCGTTGCGTGA
AGCGCATCCGCAAAACGGTCAGCCTCTGTTCCGCATTACGGCTAGCGCGA
CGGGTAAGGGAGGTGTTGTGGCGTTCGTGCAGGGTGATGTGGTCTGGGTG
CAGAATAAGAAGGCTAAGGAGATGTGGGAGCCTATGGGGTTGGAGGATCA
GTTGGTGGAGAGAGCGGAGGGGAGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003350CBS51388_003350Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003350-T1.exon1CBS51388_003350-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003350-T1.cdsCBS51388_003350-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003350-T1CBS51388_003350-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR022783
DBxrefInterPro:IPR000467
DBxrefPFAM:PF07842
DBxrefPFAM:PF12656
DBxrefPFAM:PF01585
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:1199480..1201807 +
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