You are here

Home

CBS51388_003360-T1, CBS51388_003360-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003360-T1
Unique NameCBS51388_003360-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:1250246..1250574+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003360-T1 ID=CBS51388_003360-T1|Name=CBS51388_003360-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=329bp|location=Sequence derived from alignment at An04:1250246..1250574+ (Aspergillus niger CBS 513.88)
ATGCGTTTCACTATCCCTCTTGCCCTCTTTTTCGCCGCCCTGGCCATCGC
CGCCCCGGCTGCGGAGGCAGACAATGAATCCGGCGCTGCAGTGTCTGAGG
ACCCTGCCTTGGCTGATGCGCAGCGTTGTCGACCAGGATATAGACAGTGC
ATGGATGTATGTCTCTTCTTTTGGCTTGGGTCTTAATAAGACGTGGTTAG
CTAACTAGGTGTAGAACTGCAACCGTCACCACGGAGGTGACCGTTGCTTC
CGGGTAAATCCATCTTCTTTATCGTCTCAGTCACACTGTATCTAACAAGA
TTTAGGCCTGCTGGGCTCACTACTGCTAG
back to top

Coding sequence (CDS) from alignment at An04:1250246..1250574+

>CBS51388_003360-T1 ID=CBS51388_003360-T1|Name=CBS51388_003360-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=657bp|location=Sequence derived from alignment at An04:1250246..1250574+ (Aspergillus niger CBS 513.88)
ATGCGTTTCACTATCCCTCTTGCCCTCTTTTTCGCCGCCCTGGCCATCGC
CGCCCCGGCTGCGGAGGCAGACAATGAATCCGGCGCTGCAGTGTCTGAGG
ACCCTGCCTTGGCTGATGCGCAGCGTTGTCGACCAGGATATAGACAGTGC
ATGGATAACTGCAACCGTCACCACGGAGGTGACCGTTGCTTCCGGGCCTG
CTGGGCTCACTACTGCTAGATGCGTTTCACTATCCCTCTTGCCCTCTTTT
TCGCCGCCCTGGCCATCGCCGCCCCGGCTGCGGAGGCAGACAATGAATCC
GGCGCTGCAGTGTCTGAGGACCCTGCCTTGGCTGATGCGCAGCGTTGTCG
ACCAGGATATAGACAGTGCATGGATAACTGCAACCGTCACCACGGAGGTG
ACCGTTGCTTCCGGGCCTGCTGGGCTCACTACTGCTAGATGCGTTTCACT
ATCCCTCTTGCCCTCTTTTTCGCCGCCCTGGCCATCGCCGCCCCGGCTGC
GGAGGCAGACAATGAATCCGGCGCTGCAGTGTCTGAGGACCCTGCCTTGG
CTGATGCGCAGCGTTGTCGACCAGGATATAGACAGTGCATGGATAACTGC
AACCGTCACCACGGAGGTGACCGTTGCTTCCGGGCCTGCTGGGCTCACTA
CTGCTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003360CBS51388_003360Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003360-T1.exon1CBS51388_003360-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_003360-T1.exon2CBS51388_003360-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003360-T1.exon3CBS51388_003360-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003360-T1.cdsCBS51388_003360-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003360-T1CBS51388_003360-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-23)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:1250246..1250574 +
Powered by Drupal