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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:1484687..1486377- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003426-T1 ID=CBS51388_003426-T1|Name=CBS51388_003426-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1691bp|location=Sequence derived from alignment at An04:1484687..1486377- (Aspergillus niger CBS 513.88)
ATGCCGCTCTTTCAGCCTGAGCGTGTTGCTGTTATAGGGGGCGGTTGCAC
GGGTATCACGACCTTCTGGGCGTTGCGGAATTCCACCCATGATGTCCATC
TCTTTGAAGCCTCGGACTCTCTTGGTGGGCGCGTAAAGGCCCTGCCTTTT
GAGCATAATGATCACCGAGTTGATGTCAATACAAGTCCTCCCACTTTCAA
TGCAGGGACTTCTCGTTAGTGGCAATCTCCGAGCCCGTATCTTTCTTGAC
TAATTCACACCTTCAGCCAACCTCGTTTCGTTGTTAGACCACCTCGGGAT
TACCGGTGTCAAGGCTCCGTTCTCCTTTGGGGCTACAGATGGGATTGACA
GTTTCCAATGGTGTGGTAGCGTACTGAAAAGTATACTTCTTCGTCCATGG
ACGCTTTGCAACTTTGAGACCTATCGCATACTGTGCGATGTTATTTGGAT
GAGATACATGGCCGTGGACGTACTTGATCACGGCTTTGAGGCTTGTAACC
CCACCGACGCCCAGTCATTATCTATGCATGAGTACCTCGCAGGCGAAGAG
TACTCCAATATCTTTATCGAGAACTACCTAGCTCCACTGCTGTCCATGCT
GTGGAGCACAAATGCGGGGAGATTTCTGCCACGGGTGCCTGCGAAAGCTC
TCGTCCAGGCTCTGTGTGATCATCAGCTGCTGAGGCCCCGTCAAGCCTTG
CCAGACTGGCGTCGTATCGGACCAGGGGTGAGTCATTTCATCCAGACCAT
GACGAAAAGCTTCCCCTCCTCCAAGGTCCATCTTAAGACCAGAGTAAGGG
AGGTCGTTCAGTATGGAAAGAAGTATGGTATCATGACATCTGCGGGCGAA
GAAATGTTCTTCAACCATATCGTCTTCGCCGTGAACGGCCAGGAGACTAT
CAAGATATTGGGAACGCTCGCAAACGAGCAAGAAAAGGAGATCATGCGAA
GCTTGGGATCAACCCGAAACATTTCTGTTTTACATTCAGACCCTCTTGTA
AGTCATAACCGCTTATATATAATCTCCTACTAACCGCACAAACCAGCTCA
TGCCCAACGTCGAGGACCCCGGCCCCGCCTGCAACTACATCCTAGGCCCC
AGCAACCAAGACTGGCCAACCCAACCAAGCAACAACACCACTACCACCAC
ATCCCACATCTCCAGCCTCAGCTACATCGCCAACTTCCTCGACAGCATTC
CATTCCACCTTTTCGGCCCCATCTACATCACATTGAACCCCTTCACTCCA
CCCCACCCAAGCCAAGTGCAAGGTGTATGGGAGTTCACCGACCCCGAACC
AAGCGCCCAGACCCTGATAGCACAACACCATCTCCCCTCCATCCAGAACA
AGCGTGGTCTGAGTTACGGTTTCTGCTGGACAGGACGCGGACACTTAGAA
GATGCCATCACGGCTGGTCTTAGAATCGCCATTCAGGACCTAGGCGCCGA
GGCTCCATTCCACGTGAAATTCCACCAGGATCCTCTGGAGGCGGCGGCTT
CAGGGCCCCCGGGCCTCGGCTTGAGAGATAATGCGATCCGGACGATTATT
CGTTTGGTTCATGTTTATGTTCTCATTATGAGACTCGTTTTGGTTTTGTT
TAGAGCTTTGCCGGGTGCAGCTGTGAAGGCGAAGACAAGATTTAGACCGA
TGTGCAATGCTGCTGCTGCTAGTAAGGAGAAGACTTCTTGA back to topCoding sequence (CDS) from alignment at An04:1484687..1486377- >CBS51388_003426-T1 ID=CBS51388_003426-T1|Name=CBS51388_003426-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4707bp|location=Sequence derived from alignment at An04:1484687..1486377- (Aspergillus niger CBS 513.88)
CTCATGCCCAACGTCGAGGACCCCGGCCCCGCCTGCAACTACATCCTAGG
CCCCAGCAACCAAGACTGGCCAACCCAACCAAGCAACAACACCACTACCA
CCACATCCCACATCTCCAGCCTCAGCTACATCGCCAACTTCCTCGACAGC
ATTCCATTCCACCTTTTCGGCCCCATCTACATCACATTGAACCCCTTCAC
TCCACCCCACCCAAGCCAAGTGCAAGGTGTATGGGAGTTCACCGACCCCG
AACCAAGCGCCCAGACCCTGATAGCACAACACCATCTCCCCTCCATCCAG
AACAAGCGTGGTCTGAGTTACGGTTTCTGCTGGACAGGACGCGGACACTT
AGAAGATGCCATCACGGCTGGTCTTAGAATCGCCATTCAGGACCTAGGCG
CCGAGGCTCCATTCCACGTGAAATTCCACCAGGATCCTCTGGAGGCGGCG
GCTTCAGGGCCCCCGGGCCTCGGCTTGAGAGATAATGCGATCCGGACGAT
TATTCGTTTGGTTCATGTTTATGTTCTCATTATGAGACTCGTTTTGGTTT
TGTTTAGAGCTTTGCCGGGTGCAGCTGTGAAGGCGAAGACAAGATTTAGA
CCGATGTGCAATGCTGCTGCTGCTAGTAAGGAGAAGACTTCTTGAACCAC
CTCGGGATTACCGGTGTCAAGGCTCCGTTCTCCTTTGGGGCTACAGATGG
GATTGACAGTTTCCAATGGTGTGGTAGCGTACTGAAAAGTATACTTCTTC
GTCCATGGACGCTTTGCAACTTTGAGACCTATCGCATACTGTGCGATGTT
ATTTGGATGAGATACATGGCCGTGGACGTACTTGATCACGGCTTTGAGGC
TTGTAACCCCACCGACGCCCAGTCATTATCTATGCATGAGTACCTCGCAG
GCGAAGAGTACTCCAATATCTTTATCGAGAACTACCTAGCTCCACTGCTG
TCCATGCTGTGGAGCACAAATGCGGGGAGATTTCTGCCACGGGTGCCTGC
GAAAGCTCTCGTCCAGGCTCTGTGTGATCATCAGCTGCTGAGGCCCCGTC
AAGCCTTGCCAGACTGGCGTCGTATCGGACCAGGGGTGAGTCATTTCATC
CAGACCATGACGAAAAGCTTCCCCTCCTCCAAGGTCCATCTTAAGACCAG
AGTAAGGGAGGTCGTTCAGTATGGAAAGAAGTATGGTATCATGACATCTG
CGGGCGAAGAAATGTTCTTCAACCATATCGTCTTCGCCGTGAACGGCCAG
GAGACTATCAAGATATTGGGAACGCTCGCAAACGAGCAAGAAAAGGAGAT
CATGCGAAGCTTGGGATCAACCCGAAACATTTCTGTTTTACATTCAGACC
CTCTTATGCCGCTCTTTCAGCCTGAGCGTGTTGCTGTTATAGGGGGCGGT
TGCACGGGTATCACGACCTTCTGGGCGTTGCGGAATTCCACCCATGATGT
CCATCTCTTTGAAGCCTCGGACTCTCTTGGTGGGCGCGTAAAGGCCCTGC
CTTTTGAGCATAATGATCACCGAGTTGATGTCAATACAAGTCCTCCCACT
TTCAATGCAGGGACTTCTCCTCATGCCCAACGTCGAGGACCCCGGCCCCG
CCTGCAACTACATCCTAGGCCCCAGCAACCAAGACTGGCCAACCCAACCA
AGCAACAACACCACTACCACCACATCCCACATCTCCAGCCTCAGCTACAT
CGCCAACTTCCTCGACAGCATTCCATTCCACCTTTTCGGCCCCATCTACA
TCACATTGAACCCCTTCACTCCACCCCACCCAAGCCAAGTGCAAGGTGTA
TGGGAGTTCACCGACCCCGAACCAAGCGCCCAGACCCTGATAGCACAACA
CCATCTCCCCTCCATCCAGAACAAGCGTGGTCTGAGTTACGGTTTCTGCT
GGACAGGACGCGGACACTTAGAAGATGCCATCACGGCTGGTCTTAGAATC
GCCATTCAGGACCTAGGCGCCGAGGCTCCATTCCACGTGAAATTCCACCA
GGATCCTCTGGAGGCGGCGGCTTCAGGGCCCCCGGGCCTCGGCTTGAGAG
ATAATGCGATCCGGACGATTATTCGTTTGGTTCATGTTTATGTTCTCATT
ATGAGACTCGTTTTGGTTTTGTTTAGAGCTTTGCCGGGTGCAGCTGTGAA
GGCGAAGACAAGATTTAGACCGATGTGCAATGCTGCTGCTGCTAGTAAGG
AGAAGACTTCTTGAACCACCTCGGGATTACCGGTGTCAAGGCTCCGTTCT
CCTTTGGGGCTACAGATGGGATTGACAGTTTCCAATGGTGTGGTAGCGTA
CTGAAAAGTATACTTCTTCGTCCATGGACGCTTTGCAACTTTGAGACCTA
TCGCATACTGTGCGATGTTATTTGGATGAGATACATGGCCGTGGACGTAC
TTGATCACGGCTTTGAGGCTTGTAACCCCACCGACGCCCAGTCATTATCT
ATGCATGAGTACCTCGCAGGCGAAGAGTACTCCAATATCTTTATCGAGAA
CTACCTAGCTCCACTGCTGTCCATGCTGTGGAGCACAAATGCGGGGAGAT
TTCTGCCACGGGTGCCTGCGAAAGCTCTCGTCCAGGCTCTGTGTGATCAT
CAGCTGCTGAGGCCCCGTCAAGCCTTGCCAGACTGGCGTCGTATCGGACC
AGGGGTGAGTCATTTCATCCAGACCATGACGAAAAGCTTCCCCTCCTCCA
AGGTCCATCTTAAGACCAGAGTAAGGGAGGTCGTTCAGTATGGAAAGAAG
TATGGTATCATGACATCTGCGGGCGAAGAAATGTTCTTCAACCATATCGT
CTTCGCCGTGAACGGCCAGGAGACTATCAAGATATTGGGAACGCTCGCAA
ACGAGCAAGAAAAGGAGATCATGCGAAGCTTGGGATCAACCCGAAACATT
TCTGTTTTACATTCAGACCCTCTTATGCCGCTCTTTCAGCCTGAGCGTGT
TGCTGTTATAGGGGGCGGTTGCACGGGTATCACGACCTTCTGGGCGTTGC
GGAATTCCACCCATGATGTCCATCTCTTTGAAGCCTCGGACTCTCTTGGT
GGGCGCGTAAAGGCCCTGCCTTTTGAGCATAATGATCACCGAGTTGATGT
CAATACAAGTCCTCCCACTTTCAATGCAGGGACTTCTCCTCATGCCCAAC
GTCGAGGACCCCGGCCCCGCCTGCAACTACATCCTAGGCCCCAGCAACCA
AGACTGGCCAACCCAACCAAGCAACAACACCACTACCACCACATCCCACA
TCTCCAGCCTCAGCTACATCGCCAACTTCCTCGACAGCATTCCATTCCAC
CTTTTCGGCCCCATCTACATCACATTGAACCCCTTCACTCCACCCCACCC
AAGCCAAGTGCAAGGTGTATGGGAGTTCACCGACCCCGAACCAAGCGCCC
AGACCCTGATAGCACAACACCATCTCCCCTCCATCCAGAACAAGCGTGGT
CTGAGTTACGGTTTCTGCTGGACAGGACGCGGACACTTAGAAGATGCCAT
CACGGCTGGTCTTAGAATCGCCATTCAGGACCTAGGCGCCGAGGCTCCAT
TCCACGTGAAATTCCACCAGGATCCTCTGGAGGCGGCGGCTTCAGGGCCC
CCGGGCCTCGGCTTGAGAGATAATGCGATCCGGACGATTATTCGTTTGGT
TCATGTTTATGTTCTCATTATGAGACTCGTTTTGGTTTTGTTTAGAGCTT
TGCCGGGTGCAGCTGTGAAGGCGAAGACAAGATTTAGACCGATGTGCAAT
GCTGCTGCTGCTAGTAAGGAGAAGACTTCTTGAACCACCTCGGGATTACC
GGTGTCAAGGCTCCGTTCTCCTTTGGGGCTACAGATGGGATTGACAGTTT
CCAATGGTGTGGTAGCGTACTGAAAAGTATACTTCTTCGTCCATGGACGC
TTTGCAACTTTGAGACCTATCGCATACTGTGCGATGTTATTTGGATGAGA
TACATGGCCGTGGACGTACTTGATCACGGCTTTGAGGCTTGTAACCCCAC
CGACGCCCAGTCATTATCTATGCATGAGTACCTCGCAGGCGAAGAGTACT
CCAATATCTTTATCGAGAACTACCTAGCTCCACTGCTGTCCATGCTGTGG
AGCACAAATGCGGGGAGATTTCTGCCACGGGTGCCTGCGAAAGCTCTCGT
CCAGGCTCTGTGTGATCATCAGCTGCTGAGGCCCCGTCAAGCCTTGCCAG
ACTGGCGTCGTATCGGACCAGGGGTGAGTCATTTCATCCAGACCATGACG
AAAAGCTTCCCCTCCTCCAAGGTCCATCTTAAGACCAGAGTAAGGGAGGT
CGTTCAGTATGGAAAGAAGTATGGTATCATGACATCTGCGGGCGAAGAAA
TGTTCTTCAACCATATCGTCTTCGCCGTGAACGGCCAGGAGACTATCAAG
ATATTGGGAACGCTCGCAAACGAGCAAGAAAAGGAGATCATGCGAAGCTT
GGGATCAACCCGAAACATTTCTGTTTTACATTCAGACCCTCTTATGCCGC
TCTTTCAGCCTGAGCGTGTTGCTGTTATAGGGGGCGGTTGCACGGGTATC
ACGACCTTCTGGGCGTTGCGGAATTCCACCCATGATGTCCATCTCTTTGA
AGCCTCGGACTCTCTTGGTGGGCGCGTAAAGGCCCTGCCTTTTGAGCATA
ATGATCACCGAGTTGATGTCAATACAAGTCCTCCCACTTTCAATGCAGGG
ACTTCTC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF13450 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:1484687..1486377 - |
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