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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:1595289..1597468+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003467-T1 ID=CBS51388_003467-T1|Name=CBS51388_003467-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2180bp|location=Sequence derived from alignment at An04:1595289..1597468+ (Aspergillus niger CBS 513.88)
ATGACCCCTGCAAGAGGGCGTGGCCCAAGCCAAAGGAGTCCTCATGTCCT
GGTGAGCATTCATTACCCCCCTACCTCCCCTCCCTCCGTCCGGCGCAATC
TATACTAGAAATCCAACTAACCACGCCCATCATCATCCAGGTGACCGACT
CCCGAGACCAACAAACCACTCAACCCCGTCGTCGCCGCTCCCCCGCAACC
CGTTTCATCACAGTCGACAATGTCCTCCAATACACCTCCGACGTCCCCTC
CATGCAGCAGCGCCATCCGCCCCAAGGCAGCGTCCGGGCGCGGCCGCGCT
CCCGTCTCGCTTCCGCCGCGGGCGGCTTAATCGGTGCTGGCGGAGCGGGC
TCCTCCACCGGGGGATCCAGTGCGGTCAGCCCAGCAGCGACCATGAAGCG
ACTTGCAGCGCAGCCGCGACTGCCTCCCCGTACAACCAAAGTCAGTGAGA
AGCTGGTGCTTCTGCCAGAGGCCGGGGACGAATTGCGCGAGGAAGAGGAA
GAAGGGGACGAGGAAGATGAGGAGACGGTGGACGAGGAGTTTGTGCAGAG
GATCGCGAAGGATAAGAATCTCAACCCCGATGCGGTGAGGCAGACGTTAC
TGGCGCAGAAGAAGCTTGATGGGGATTTTGGCGTCGATAACGAGATTGCC
CCGTTGTTGGCGGAGGAGGAGTTGATGAGGAGGAGGAAGGTCGCTCCGGA
GAAGGCGAAGAGTTATGCGGAGAGGTTGCCTAAGGCGCGGCGCGCGGAGA
AGTTGGCGAGAGTGACGGCGTACTGTACGGCGCAGGCTTATAAGATGAGC
TCGTTGGCGTCGTTTGTGAAAGAGAGGCATGGGGGGAAGACGAAGCTCTA
CGATGATTGTCTGTATACGGCGTATCATTTGCCGTTGTTGCCTGGGCATG
AGGGGTATAGGCTGAGGAGTAGTCCGGTGCTGAAGAAGCCTGGTGGGAAG
TCGCTGCTTGATGAGGAAATTGAGCGGAATGAGCTGCGAGATCATCATGA
AGACTATATGCCGGAGGCGGAGGAGCATTCGGTGTTTGGGGGCCGTCATG
AACATGGTTCGCACCCACATGAACCGCATCAAGCTGGTGGAGAAGACCAT
GCTGAGTCTGGCTCGAGGGAGCAGTTTGGTCAAGATACTGGACACAGCCA
GCCAGGTCCGACTGCTGGCGCAACGGCGTCGTCGAGGCTATCATACAATG
TGGCGGAGATGTTTGTCTTTAGCTACGGAGTTGTCGTGTTTTGGAACTTC
ACCGAAAAGCAAGAGAAGGATCTCCTAGCCGATTTGGCATTTGCGACGTC
GTCCGCAACGGGGTCACCCATCCCACTGGCCACCATGCCATTGCAAGAGG
AGGACTTTGAAACGGAGGAGTTCCATTTCGAATATTCAACTGAAATCTCA
CGCCCGCGCGTCTACAATGACATGATCACTCTGCGCAGCGGCGACCACAT
GATCAAGCTAGCCATCAGTCATGGCATTGCTCAGAGTACTAAGCTCTGCT
TCTTCGAAGAAGTCATGGCTCGCCAGATGGCCGAGGCCAAGGACGTCCCT
CGCCGACTCGCCATGACTGGCAACCTAGGGATGAAGCGAGACGAAGTATT
CCGCATCCTGGGCAGTTTGTTCAAGAGCCGAGTGGAAGTGAACCTCTGTA
AGTGACACTCTCAAACCATCAAGCTGGATAACTTTCTAATCTTCATACAG
CATCCAATATGCTCGACGTCCCCAACTTTTTCTGGGAAAGCGAACCCACT
CTCTACCCGCTCTACATCGCCGTGCGCGAATACCTCGAGATCAAGCCCCG
AATCCAAGTCCTCAACGAACGCTGCCGTGTCTTCCTCGACCTGGCTGAGA
TCCTCTCCGATTCGATCGCCGACAACAGAACCTCGCGTATGCCACCATCC
CCTACCATGAAACTAGAACCCCAAACTAACATGATTAGACCAAACCTGGA
TCATCATCGTCCTAATTATCATCTCCATCCTCGTCACCACCTTCGAAGTC
TTCCTCCGCTTCGGCCTCCTCTCCGCCCGCGAGAACGACGCGTCCTCAAC
AATCACTACCATCCTCTCCCGAGCCCTCGGCCATACCTCACCCGCACCCG
TATGCTCATGTCCAGCACCTGCTGTTCCCGGAGTTCCAGCAGGCATGGGA
GCATTGAATACCACCGGCTTGCCGTATTGA back to topCoding sequence (CDS) from alignment at An04:1595289..1597468+ >CBS51388_003467-T1 ID=CBS51388_003467-T1|Name=CBS51388_003467-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7944bp|location=Sequence derived from alignment at An04:1595289..1597468+ (Aspergillus niger CBS 513.88)
ATGACCCCTGCAAGAGGGCGTGGCCCAAGCCAAAGGAGTCCTCATGTCCT
GGTGACCGACTCCCGAGACCAACAAACCACTCAACCCCGTCGTCGCCGCT
CCCCCGCAACCCGTTTCATCACAGTCGACAATGTCCTCCAATACACCTCC
GACGTCCCCTCCATGCAGCAGCGCCATCCGCCCCAAGGCAGCGTCCGGGC
GCGGCCGCGCTCCCGTCTCGCTTCCGCCGCGGGCGGCTTAATCGGTGCTG
GCGGAGCGGGCTCCTCCACCGGGGGATCCAGTGCGGTCAGCCCAGCAGCG
ACCATGAAGCGACTTGCAGCGCAGCCGCGACTGCCTCCCCGTACAACCAA
AGTCAGTGAGAAGCTGGTGCTTCTGCCAGAGGCCGGGGACGAATTGCGCG
AGGAAGAGGAAGAAGGGGACGAGGAAGATGAGGAGACGGTGGACGAGGAG
TTTGTGCAGAGGATCGCGAAGGATAAGAATCTCAACCCCGATGCGGTGAG
GCAGACGTTACTGGCGCAGAAGAAGCTTGATGGGGATTTTGGCGTCGATA
ACGAGATTGCCCCGTTGTTGGCGGAGGAGGAGTTGATGAGGAGGAGGAAG
GTCGCTCCGGAGAAGGCGAAGAGTTATGCGGAGAGGTTGCCTAAGGCGCG
GCGCGCGGAGAAGTTGGCGAGAGTGACGGCGTACTGTACGGCGCAGGCTT
ATAAGATGAGCTCGTTGGCGTCGTTTGTGAAAGAGAGGCATGGGGGGAAG
ACGAAGCTCTACGATGATTGTCTGTATACGGCGTATCATTTGCCGTTGTT
GCCTGGGCATGAGGGGTATAGGCTGAGGAGTAGTCCGGTGCTGAAGAAGC
CTGGTGGGAAGTCGCTGCTTGATGAGGAAATTGAGCGGAATGAGCTGCGA
GATCATCATGAAGACTATATGCCGGAGGCGGAGGAGCATTCGGTGTTTGG
GGGCCGTCATGAACATGGTTCGCACCCACATGAACCGCATCAAGCTGGTG
GAGAAGACCATGCTGAGTCTGGCTCGAGGGAGCAGTTTGGTCAAGATACT
GGACACAGCCAGCCAGGTCCGACTGCTGGCGCAACGGCGTCGTCGAGGCT
ATCATACAATGTGGCGGAGATGTTTGTCTTTAGCTACGGAGTTGTCGTGT
TTTGGAACTTCACCGAAAAGCAAGAGAAGGATCTCCTAGCCGATTTGGCA
TTTGCGACGTCGTCCGCAACGGGGTCACCCATCCCACTGGCCACCATGCC
ATTGCAAGAGGAGGACTTTGAAACGGAGGAGTTCCATTTCGAATATTCAA
CTGAAATCTCACGCCCGCGCGTCTACAATGACATGATCACTCTGCGCAGC
GGCGACCACATGATCAAGCTAGCCATCAGTCATGGCATTGCTCAGAGTAC
TAAGCTCTGCTTCTTCGAAGAAGTCATGGCTCGCCAGATGGCCGAGGCCA
AGGACGTCCCTCGCCGACTCGCCATGACTGGCAACCTAGGGATGAAGCGA
GACGAAGTATTCCGCATCCTGGGCAGTTTGTTCAAGAGCCGAGTGGAAGT
GAACCTCTCATCCAATATGCTCGACGTCCCCAACTTTTTCTGGGAAAGCG
AACCCACTCTCTACCCGCTCTACATCGCCGTGCGCGAATACCTCGAGATC
AAGCCCCGAATCCAAGTCCTCAACGAACGCTGCCGTGTCTTCCTCGACCT
GGCTGAGATCCTCTCCGATTCGATCGCCGACAACAGAACCTCGCACCAAA
CCTGGATCATCATCGTCCTAATTATCATCTCCATCCTCGTCACCACCTTC
GAAGTCTTCCTCCGCTTCGGCCTCCTCTCCGCCCGCGAGAACGACGCGTC
CTCAACAATCACTACCATCCTCTCCCGAGCCCTCGGCCATACCTCACCCG
CACCCGTATGCTCATGTCCAGCACCTGCTGTTCCCGGAGTTCCAGCAGGC
ATGGGAGCATTGAATACCACCGGCTTGCCGTATTGAATGACCCCTGCAAG
AGGGCGTGGCCCAAGCCAAAGGAGTCCTCATGTCCTGGTGACCGACTCCC
GAGACCAACAAACCACTCAACCCCGTCGTCGCCGCTCCCCCGCAACCCGT
TTCATCACAGTCGACAATGTCCTCCAATACACCTCCGACGTCCCCTCCAT
GCAGCAGCGCCATCCGCCCCAAGGCAGCGTCCGGGCGCGGCCGCGCTCCC
GTCTCGCTTCCGCCGCGGGCGGCTTAATCGGTGCTGGCGGAGCGGGCTCC
TCCACCGGGGGATCCAGTGCGGTCAGCCCAGCAGCGACCATGAAGCGACT
TGCAGCGCAGCCGCGACTGCCTCCCCGTACAACCAAAGTCAGTGAGAAGC
TGGTGCTTCTGCCAGAGGCCGGGGACGAATTGCGCGAGGAAGAGGAAGAA
GGGGACGAGGAAGATGAGGAGACGGTGGACGAGGAGTTTGTGCAGAGGAT
CGCGAAGGATAAGAATCTCAACCCCGATGCGGTGAGGCAGACGTTACTGG
CGCAGAAGAAGCTTGATGGGGATTTTGGCGTCGATAACGAGATTGCCCCG
TTGTTGGCGGAGGAGGAGTTGATGAGGAGGAGGAAGGTCGCTCCGGAGAA
GGCGAAGAGTTATGCGGAGAGGTTGCCTAAGGCGCGGCGCGCGGAGAAGT
TGGCGAGAGTGACGGCGTACTGTACGGCGCAGGCTTATAAGATGAGCTCG
TTGGCGTCGTTTGTGAAAGAGAGGCATGGGGGGAAGACGAAGCTCTACGA
TGATTGTCTGTATACGGCGTATCATTTGCCGTTGTTGCCTGGGCATGAGG
GGTATAGGCTGAGGAGTAGTCCGGTGCTGAAGAAGCCTGGTGGGAAGTCG
CTGCTTGATGAGGAAATTGAGCGGAATGAGCTGCGAGATCATCATGAAGA
CTATATGCCGGAGGCGGAGGAGCATTCGGTGTTTGGGGGCCGTCATGAAC
ATGGTTCGCACCCACATGAACCGCATCAAGCTGGTGGAGAAGACCATGCT
GAGTCTGGCTCGAGGGAGCAGTTTGGTCAAGATACTGGACACAGCCAGCC
AGGTCCGACTGCTGGCGCAACGGCGTCGTCGAGGCTATCATACAATGTGG
CGGAGATGTTTGTCTTTAGCTACGGAGTTGTCGTGTTTTGGAACTTCACC
GAAAAGCAAGAGAAGGATCTCCTAGCCGATTTGGCATTTGCGACGTCGTC
CGCAACGGGGTCACCCATCCCACTGGCCACCATGCCATTGCAAGAGGAGG
ACTTTGAAACGGAGGAGTTCCATTTCGAATATTCAACTGAAATCTCACGC
CCGCGCGTCTACAATGACATGATCACTCTGCGCAGCGGCGACCACATGAT
CAAGCTAGCCATCAGTCATGGCATTGCTCAGAGTACTAAGCTCTGCTTCT
TCGAAGAAGTCATGGCTCGCCAGATGGCCGAGGCCAAGGACGTCCCTCGC
CGACTCGCCATGACTGGCAACCTAGGGATGAAGCGAGACGAAGTATTCCG
CATCCTGGGCAGTTTGTTCAAGAGCCGAGTGGAAGTGAACCTCTCATCCA
ATATGCTCGACGTCCCCAACTTTTTCTGGGAAAGCGAACCCACTCTCTAC
CCGCTCTACATCGCCGTGCGCGAATACCTCGAGATCAAGCCCCGAATCCA
AGTCCTCAACGAACGCTGCCGTGTCTTCCTCGACCTGGCTGAGATCCTCT
CCGATTCGATCGCCGACAACAGAACCTCGCACCAAACCTGGATCATCATC
GTCCTAATTATCATCTCCATCCTCGTCACCACCTTCGAAGTCTTCCTCCG
CTTCGGCCTCCTCTCCGCCCGCGAGAACGACGCGTCCTCAACAATCACTA
CCATCCTCTCCCGAGCCCTCGGCCATACCTCACCCGCACCCGTATGCTCA
TGTCCAGCACCTGCTGTTCCCGGAGTTCCAGCAGGCATGGGAGCATTGAA
TACCACCGGCTTGCCGTATTGAATGACCCCTGCAAGAGGGCGTGGCCCAA
GCCAAAGGAGTCCTCATGTCCTGGTGACCGACTCCCGAGACCAACAAACC
ACTCAACCCCGTCGTCGCCGCTCCCCCGCAACCCGTTTCATCACAGTCGA
CAATGTCCTCCAATACACCTCCGACGTCCCCTCCATGCAGCAGCGCCATC
CGCCCCAAGGCAGCGTCCGGGCGCGGCCGCGCTCCCGTCTCGCTTCCGCC
GCGGGCGGCTTAATCGGTGCTGGCGGAGCGGGCTCCTCCACCGGGGGATC
CAGTGCGGTCAGCCCAGCAGCGACCATGAAGCGACTTGCAGCGCAGCCGC
GACTGCCTCCCCGTACAACCAAAGTCAGTGAGAAGCTGGTGCTTCTGCCA
GAGGCCGGGGACGAATTGCGCGAGGAAGAGGAAGAAGGGGACGAGGAAGA
TGAGGAGACGGTGGACGAGGAGTTTGTGCAGAGGATCGCGAAGGATAAGA
ATCTCAACCCCGATGCGGTGAGGCAGACGTTACTGGCGCAGAAGAAGCTT
GATGGGGATTTTGGCGTCGATAACGAGATTGCCCCGTTGTTGGCGGAGGA
GGAGTTGATGAGGAGGAGGAAGGTCGCTCCGGAGAAGGCGAAGAGTTATG
CGGAGAGGTTGCCTAAGGCGCGGCGCGCGGAGAAGTTGGCGAGAGTGACG
GCGTACTGTACGGCGCAGGCTTATAAGATGAGCTCGTTGGCGTCGTTTGT
GAAAGAGAGGCATGGGGGGAAGACGAAGCTCTACGATGATTGTCTGTATA
CGGCGTATCATTTGCCGTTGTTGCCTGGGCATGAGGGGTATAGGCTGAGG
AGTAGTCCGGTGCTGAAGAAGCCTGGTGGGAAGTCGCTGCTTGATGAGGA
AATTGAGCGGAATGAGCTGCGAGATCATCATGAAGACTATATGCCGGAGG
CGGAGGAGCATTCGGTGTTTGGGGGCCGTCATGAACATGGTTCGCACCCA
CATGAACCGCATCAAGCTGGTGGAGAAGACCATGCTGAGTCTGGCTCGAG
GGAGCAGTTTGGTCAAGATACTGGACACAGCCAGCCAGGTCCGACTGCTG
GCGCAACGGCGTCGTCGAGGCTATCATACAATGTGGCGGAGATGTTTGTC
TTTAGCTACGGAGTTGTCGTGTTTTGGAACTTCACCGAAAAGCAAGAGAA
GGATCTCCTAGCCGATTTGGCATTTGCGACGTCGTCCGCAACGGGGTCAC
CCATCCCACTGGCCACCATGCCATTGCAAGAGGAGGACTTTGAAACGGAG
GAGTTCCATTTCGAATATTCAACTGAAATCTCACGCCCGCGCGTCTACAA
TGACATGATCACTCTGCGCAGCGGCGACCACATGATCAAGCTAGCCATCA
GTCATGGCATTGCTCAGAGTACTAAGCTCTGCTTCTTCGAAGAAGTCATG
GCTCGCCAGATGGCCGAGGCCAAGGACGTCCCTCGCCGACTCGCCATGAC
TGGCAACCTAGGGATGAAGCGAGACGAAGTATTCCGCATCCTGGGCAGTT
TGTTCAAGAGCCGAGTGGAAGTGAACCTCTCATCCAATATGCTCGACGTC
CCCAACTTTTTCTGGGAAAGCGAACCCACTCTCTACCCGCTCTACATCGC
CGTGCGCGAATACCTCGAGATCAAGCCCCGAATCCAAGTCCTCAACGAAC
GCTGCCGTGTCTTCCTCGACCTGGCTGAGATCCTCTCCGATTCGATCGCC
GACAACAGAACCTCGCACCAAACCTGGATCATCATCGTCCTAATTATCAT
CTCCATCCTCGTCACCACCTTCGAAGTCTTCCTCCGCTTCGGCCTCCTCT
CCGCCCGCGAGAACGACGCGTCCTCAACAATCACTACCATCCTCTCCCGA
GCCCTCGGCCATACCTCACCCGCACCCGTATGCTCATGTCCAGCACCTGC
TGTTCCCGGAGTTCCAGCAGGCATGGGAGCATTGAATACCACCGGCTTGC
CGTATTGAATGACCCCTGCAAGAGGGCGTGGCCCAAGCCAAAGGAGTCCT
CATGTCCTGGTGACCGACTCCCGAGACCAACAAACCACTCAACCCCGTCG
TCGCCGCTCCCCCGCAACCCGTTTCATCACAGTCGACAATGTCCTCCAAT
ACACCTCCGACGTCCCCTCCATGCAGCAGCGCCATCCGCCCCAAGGCAGC
GTCCGGGCGCGGCCGCGCTCCCGTCTCGCTTCCGCCGCGGGCGGCTTAAT
CGGTGCTGGCGGAGCGGGCTCCTCCACCGGGGGATCCAGTGCGGTCAGCC
CAGCAGCGACCATGAAGCGACTTGCAGCGCAGCCGCGACTGCCTCCCCGT
ACAACCAAAGTCAGTGAGAAGCTGGTGCTTCTGCCAGAGGCCGGGGACGA
ATTGCGCGAGGAAGAGGAAGAAGGGGACGAGGAAGATGAGGAGACGGTGG
ACGAGGAGTTTGTGCAGAGGATCGCGAAGGATAAGAATCTCAACCCCGAT
GCGGTGAGGCAGACGTTACTGGCGCAGAAGAAGCTTGATGGGGATTTTGG
CGTCGATAACGAGATTGCCCCGTTGTTGGCGGAGGAGGAGTTGATGAGGA
GGAGGAAGGTCGCTCCGGAGAAGGCGAAGAGTTATGCGGAGAGGTTGCCT
AAGGCGCGGCGCGCGGAGAAGTTGGCGAGAGTGACGGCGTACTGTACGGC
GCAGGCTTATAAGATGAGCTCGTTGGCGTCGTTTGTGAAAGAGAGGCATG
GGGGGAAGACGAAGCTCTACGATGATTGTCTGTATACGGCGTATCATTTG
CCGTTGTTGCCTGGGCATGAGGGGTATAGGCTGAGGAGTAGTCCGGTGCT
GAAGAAGCCTGGTGGGAAGTCGCTGCTTGATGAGGAAATTGAGCGGAATG
AGCTGCGAGATCATCATGAAGACTATATGCCGGAGGCGGAGGAGCATTCG
GTGTTTGGGGGCCGTCATGAACATGGTTCGCACCCACATGAACCGCATCA
AGCTGGTGGAGAAGACCATGCTGAGTCTGGCTCGAGGGAGCAGTTTGGTC
AAGATACTGGACACAGCCAGCCAGGTCCGACTGCTGGCGCAACGGCGTCG
TCGAGGCTATCATACAATGTGGCGGAGATGTTTGTCTTTAGCTACGGAGT
TGTCGTGTTTTGGAACTTCACCGAAAAGCAAGAGAAGGATCTCCTAGCCG
ATTTGGCATTTGCGACGTCGTCCGCAACGGGGTCACCCATCCCACTGGCC
ACCATGCCATTGCAAGAGGAGGACTTTGAAACGGAGGAGTTCCATTTCGA
ATATTCAACTGAAATCTCACGCCCGCGCGTCTACAATGACATGATCACTC
TGCGCAGCGGCGACCACATGATCAAGCTAGCCATCAGTCATGGCATTGCT
CAGAGTACTAAGCTCTGCTTCTTCGAAGAAGTCATGGCTCGCCAGATGGC
CGAGGCCAAGGACGTCCCTCGCCGACTCGCCATGACTGGCAACCTAGGGA
TGAAGCGAGACGAAGTATTCCGCATCCTGGGCAGTTTGTTCAAGAGCCGA
GTGGAAGTGAACCTCTCATCCAATATGCTCGACGTCCCCAACTTTTTCTG
GGAAAGCGAACCCACTCTCTACCCGCTCTACATCGCCGTGCGCGAATACC
TCGAGATCAAGCCCCGAATCCAAGTCCTCAACGAACGCTGCCGTGTCTTC
CTCGACCTGGCTGAGATCCTCTCCGATTCGATCGCCGACAACAGAACCTC
GCACCAAACCTGGATCATCATCGTCCTAATTATCATCTCCATCCTCGTCA
CCACCTTCGAAGTCTTCCTCCGCTTCGGCCTCCTCTCCGCCCGCGAGAAC
GACGCGTCCTCAACAATCACTACCATCCTCTCCCGAGCCCTCGGCCATAC
CTCACCCGCACCCGTATGCTCATGTCCAGCACCTGCTGTTCCCGGAGTTC
CAGCAGGCATGGGAGCATTGAATACCACCGGCTTGCCGTATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003734 |
| DBxref | PFAM:PF02582 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:1595289..1597468 + |
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