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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:1598866..1600247- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003468-T1 ID=CBS51388_003468-T1|Name=CBS51388_003468-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1382bp|location=Sequence derived from alignment at An04:1598866..1600247- (Aspergillus niger CBS 513.88)
ATGGTTGCCGCAGACGGACATTTTGATCATCAGCATTTGGTACCGAATCC
CGGGCTCGACCACACGTCATCGCCTAAGATGAAGTCGGAACCTGGTGTTT
CCGATGCTGGTGATCAAGCTGTCCTTGCATACCCCCCTCATGGTCCGCTC
GGCCAGGTGCCGAACATGGCCCATGATATGCGCTATGCACACCAGGCACA
CCCGGGGCCGGGGCTGCCCCTTTTGCAGAATCCTTTTGTTCCTGGGGCCT
ATGCCGGTAATGCTCAAATACCGAACGCCGGTGCCCCTCAAGGGAGGCCG
GATCCTCCTCCCAAAACCTTCCACTGTGGTACTTGCGGTAAAGGATTCGC
CCGCCGCAGTGATCTTGCAAGACACGGTAAGCATTTCTGACGAAATGTAG
AGAGAACGGTCAGCTAACGCTACCTAGAACGCATTCACTCCGGTATCAGA
CCTCATGCTTGTGACTGGCCTGGCTGTGGCAAACAATTCATCCAACGTTC
AGCTCTGACGGTGCACTCCCGAGTCCACACTGGAGAGAAGCCTCATATGT
GCGAGAGATGTGGCAAGGTATGTACCTGCTTTCTGGTTTGTATTTGAGCA
GGACTAACGACTCGCAGCCTTTCAGTGATTCGTCCTCCCTAGCGCGGCAC
CGCAGAATCCATTCTGGGAAGCGTCCCTACAAGTGTCCGTATGCGAACTG
CCAGAAGACATTTACTCGTCGCACTACCTTGACACGCCATCAGAATCACC
ACACGGGTACAATCGAGGAAGCCGCTGCAGAAACCGAGGCCAATCTGAGG
CAAAACAAGGAGAGAGCGAGAATGCCTGGTGATATGTTCTCCGAGCATGG
CTCTGTCCATTCTACCCCCTCTCCGGCACACCATCCTATCTCTCCAGCTG
GCGATCTCCCTCCCTTGAATATGCCTCGCTCCGACTACTACATGCCGAAT
GGATCGATTCCACCCCATGTTCGCGGCGGTTTCACGCAGGCTAGTCCCCG
GGCGTCCCCGACCGCCACGTCCCCATCGTTGTCTAGTTATGGTAGCGCTC
CGCACCCCCGTCCATCGATGACTTCCCATCCGTCTGGGTACGGTCCTCCG
CAGCCTCTTGAGCCGCCCGCCAACAACGACCACCGGCCCAATAGCGTTAG
CGGAAGCCCGCACATGACCAGCCTGGGTTGGCCTTCTCCTTCGCATGCCA
GCATCCCGTCGCCTGGCTCCGCAACCGATTTCTATCCTGAAACTAGCGGG
CCCGCATATCCGAGCGCCATGCCCCCTCACATGTACTTCCCCAACTCCAC
CATCCGGCGGCCCACGAGCACTGAACCGGATAGCTATGACCTGAAGCACA
AGATGGAGAGCGCATGGTCGACTCCGGTCTAA back to topCoding sequence (CDS) from alignment at An04:1598866..1600247- >CBS51388_003468-T1 ID=CBS51388_003468-T1|Name=CBS51388_003468-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3843bp|location=Sequence derived from alignment at An04:1598866..1600247- (Aspergillus niger CBS 513.88)
CCTTTCAGTGATTCGTCCTCCCTAGCGCGGCACCGCAGAATCCATTCTGG
GAAGCGTCCCTACAAGTGTCCGTATGCGAACTGCCAGAAGACATTTACTC
GTCGCACTACCTTGACACGCCATCAGAATCACCACACGGGTACAATCGAG
GAAGCCGCTGCAGAAACCGAGGCCAATCTGAGGCAAAACAAGGAGAGAGC
GAGAATGCCTGGTGATATGTTCTCCGAGCATGGCTCTGTCCATTCTACCC
CCTCTCCGGCACACCATCCTATCTCTCCAGCTGGCGATCTCCCTCCCTTG
AATATGCCTCGCTCCGACTACTACATGCCGAATGGATCGATTCCACCCCA
TGTTCGCGGCGGTTTCACGCAGGCTAGTCCCCGGGCGTCCCCGACCGCCA
CGTCCCCATCGTTGTCTAGTTATGGTAGCGCTCCGCACCCCCGTCCATCG
ATGACTTCCCATCCGTCTGGGTACGGTCCTCCGCAGCCTCTTGAGCCGCC
CGCCAACAACGACCACCGGCCCAATAGCGTTAGCGGAAGCCCGCACATGA
CCAGCCTGGGTTGGCCTTCTCCTTCGCATGCCAGCATCCCGTCGCCTGGC
TCCGCAACCGATTTCTATCCTGAAACTAGCGGGCCCGCATATCCGAGCGC
CATGCCCCCTCACATGTACTTCCCCAACTCCACCATCCGGCGGCCCACGA
GCACTGAACCGGATAGCTATGACCTGAAGCACAAGATGGAGAGCGCATGG
TCGACTCCGGTCTAAAACGCATTCACTCCGGTATCAGACCTCATGCTTGT
GACTGGCCTGGCTGTGGCAAACAATTCATCCAACGTTCAGCTCTGACGGT
GCACTCCCGAGTCCACACTGGAGAGAAGCCTCATATGTGCGAGAGATGTG
GCAAGATGGTTGCCGCAGACGGACATTTTGATCATCAGCATTTGGTACCG
AATCCCGGGCTCGACCACACGTCATCGCCTAAGATGAAGTCGGAACCTGG
TGTTTCCGATGCTGGTGATCAAGCTGTCCTTGCATACCCCCCTCATGGTC
CGCTCGGCCAGGTGCCGAACATGGCCCATGATATGCGCTATGCACACCAG
GCACACCCGGGGCCGGGGCTGCCCCTTTTGCAGAATCCTTTTGTTCCTGG
GGCCTATGCCGGTAATGCTCAAATACCGAACGCCGGTGCCCCTCAAGGGA
GGCCGGATCCTCCTCCCAAAACCTTCCACTGTGGTACTTGCGGTAAAGGA
TTCGCCCGCCGCAGTGATCTTGCAAGACACGCCTTTCAGTGATTCGTCCT
CCCTAGCGCGGCACCGCAGAATCCATTCTGGGAAGCGTCCCTACAAGTGT
CCGTATGCGAACTGCCAGAAGACATTTACTCGTCGCACTACCTTGACACG
CCATCAGAATCACCACACGGGTACAATCGAGGAAGCCGCTGCAGAAACCG
AGGCCAATCTGAGGCAAAACAAGGAGAGAGCGAGAATGCCTGGTGATATG
TTCTCCGAGCATGGCTCTGTCCATTCTACCCCCTCTCCGGCACACCATCC
TATCTCTCCAGCTGGCGATCTCCCTCCCTTGAATATGCCTCGCTCCGACT
ACTACATGCCGAATGGATCGATTCCACCCCATGTTCGCGGCGGTTTCACG
CAGGCTAGTCCCCGGGCGTCCCCGACCGCCACGTCCCCATCGTTGTCTAG
TTATGGTAGCGCTCCGCACCCCCGTCCATCGATGACTTCCCATCCGTCTG
GGTACGGTCCTCCGCAGCCTCTTGAGCCGCCCGCCAACAACGACCACCGG
CCCAATAGCGTTAGCGGAAGCCCGCACATGACCAGCCTGGGTTGGCCTTC
TCCTTCGCATGCCAGCATCCCGTCGCCTGGCTCCGCAACCGATTTCTATC
CTGAAACTAGCGGGCCCGCATATCCGAGCGCCATGCCCCCTCACATGTAC
TTCCCCAACTCCACCATCCGGCGGCCCACGAGCACTGAACCGGATAGCTA
TGACCTGAAGCACAAGATGGAGAGCGCATGGTCGACTCCGGTCTAAAACG
CATTCACTCCGGTATCAGACCTCATGCTTGTGACTGGCCTGGCTGTGGCA
AACAATTCATCCAACGTTCAGCTCTGACGGTGCACTCCCGAGTCCACACT
GGAGAGAAGCCTCATATGTGCGAGAGATGTGGCAAGATGGTTGCCGCAGA
CGGACATTTTGATCATCAGCATTTGGTACCGAATCCCGGGCTCGACCACA
CGTCATCGCCTAAGATGAAGTCGGAACCTGGTGTTTCCGATGCTGGTGAT
CAAGCTGTCCTTGCATACCCCCCTCATGGTCCGCTCGGCCAGGTGCCGAA
CATGGCCCATGATATGCGCTATGCACACCAGGCACACCCGGGGCCGGGGC
TGCCCCTTTTGCAGAATCCTTTTGTTCCTGGGGCCTATGCCGGTAATGCT
CAAATACCGAACGCCGGTGCCCCTCAAGGGAGGCCGGATCCTCCTCCCAA
AACCTTCCACTGTGGTACTTGCGGTAAAGGATTCGCCCGCCGCAGTGATC
TTGCAAGACACGCCTTTCAGTGATTCGTCCTCCCTAGCGCGGCACCGCAG
AATCCATTCTGGGAAGCGTCCCTACAAGTGTCCGTATGCGAACTGCCAGA
AGACATTTACTCGTCGCACTACCTTGACACGCCATCAGAATCACCACACG
GGTACAATCGAGGAAGCCGCTGCAGAAACCGAGGCCAATCTGAGGCAAAA
CAAGGAGAGAGCGAGAATGCCTGGTGATATGTTCTCCGAGCATGGCTCTG
TCCATTCTACCCCCTCTCCGGCACACCATCCTATCTCTCCAGCTGGCGAT
CTCCCTCCCTTGAATATGCCTCGCTCCGACTACTACATGCCGAATGGATC
GATTCCACCCCATGTTCGCGGCGGTTTCACGCAGGCTAGTCCCCGGGCGT
CCCCGACCGCCACGTCCCCATCGTTGTCTAGTTATGGTAGCGCTCCGCAC
CCCCGTCCATCGATGACTTCCCATCCGTCTGGGTACGGTCCTCCGCAGCC
TCTTGAGCCGCCCGCCAACAACGACCACCGGCCCAATAGCGTTAGCGGAA
GCCCGCACATGACCAGCCTGGGTTGGCCTTCTCCTTCGCATGCCAGCATC
CCGTCGCCTGGCTCCGCAACCGATTTCTATCCTGAAACTAGCGGGCCCGC
ATATCCGAGCGCCATGCCCCCTCACATGTACTTCCCCAACTCCACCATCC
GGCGGCCCACGAGCACTGAACCGGATAGCTATGACCTGAAGCACAAGATG
GAGAGCGCATGGTCGACTCCGGTCTAAAACGCATTCACTCCGGTATCAGA
CCTCATGCTTGTGACTGGCCTGGCTGTGGCAAACAATTCATCCAACGTTC
AGCTCTGACGGTGCACTCCCGAGTCCACACTGGAGAGAAGCCTCATATGT
GCGAGAGATGTGGCAAGATGGTTGCCGCAGACGGACATTTTGATCATCAG
CATTTGGTACCGAATCCCGGGCTCGACCACACGTCATCGCCTAAGATGAA
GTCGGAACCTGGTGTTTCCGATGCTGGTGATCAAGCTGTCCTTGCATACC
CCCCTCATGGTCCGCTCGGCCAGGTGCCGAACATGGCCCATGATATGCGC
TATGCACACCAGGCACACCCGGGGCCGGGGCTGCCCCTTTTGCAGAATCC
TTTTGTTCCTGGGGCCTATGCCGGTAATGCTCAAATACCGAACGCCGGTG
CCCCTCAAGGGAGGCCGGATCCTCCTCCCAAAACCTTCCACTGTGGTACT
TGCGGTAAAGGATTCGCCCGCCGCAGTGATCTTGCAAGACACG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| DBxref | PFAM:PF00096 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:1598866..1600247 - |
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