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CBS51388_003471-T1, CBS51388_003471-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003471-T1
Unique NameCBS51388_003471-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:1615578..1616531+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003471-T1 ID=CBS51388_003471-T1|Name=CBS51388_003471-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=954bp|location=Sequence derived from alignment at An04:1615578..1616531+ (Aspergillus niger CBS 513.88)
ATGTACGACTGTGAAACCTGCCCTCGCTACTTCAACAGCTGGTATGCCTG
TCGCCAGCACATGAACGACACGGGCCATTGGGGCGTGCGGTACGAATGTG
AAACCTGCGATGACCAGTTTTTGACTCAATGGGAAGTGAAGGAACATATG
GATGACTACAGACACCACGCACCCAAGATTCCTTGCGAGACATGCGGGAG
GAAGTTCTACAATCAAACGTCAGCGGATCAGCACATGAATGCAATGGACC
ATTGGGCTCCAACATGGCCATGTGAGACTTGCACGCAGATGTTCCATACG
GAAGGTGCTGCAGAACAGCATATGCAGGCCAAATCCCATTACAAGAACTA
CTGCCACCCCTGTAACCGGCGTTTCGATACCGAGAATAACCTCAAGATGG
TAAGGCCTTCTATTTCCTCAAACATCGTGAATAAACTCAGATTTCGCTTG
TAGCACTTGAGTTCGAAGATTCACCGCGGTCAAGACATCTTCTGTCCTTT
TTGCAACGCTGCTTTTACTACGGCCACTGGCGTCGCTCACCACCTTGAAA
CCGGCTCCTGCAAACGTGCTACAGGCCTCAATCGCGAGACTATCTACAAA
TTCGTTCGCAGCCGTGACACCCAAGGCGTCATTACAAGGAAGCTGCTTGA
ATGGAATGAGGATGACAACATTCAATACAAGGCTAATTCCCGTGCATACA
ACGGCGCCTACTGGGAGTGCTACTTGTGTCATCGGGAATTCAACAGCTTG
ACCGCACTTAATCAACATCTCAATTCGCCCGTGCACAAGCAGAAGCTATA
TCATTGTCCGAACGCGAAGTGTAGGAAGCAGTTTGTTACTATAGCTGCTC
TGTTTAATCACCTGGAAAGCGAATCTTGCGCCTTTATGCGATTCGAGAAG
GTACAGCGGCAGGTTCAGAATGTGTTCCGTGACCAGAGAGCTATTGCATT
CTGA
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Coding sequence (CDS) from alignment at An04:1615578..1616531+

>CBS51388_003471-T1 ID=CBS51388_003471-T1|Name=CBS51388_003471-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1800bp|location=Sequence derived from alignment at An04:1615578..1616531+ (Aspergillus niger CBS 513.88)
ATGTACGACTGTGAAACCTGCCCTCGCTACTTCAACAGCTGGTATGCCTG
TCGCCAGCACATGAACGACACGGGCCATTGGGGCGTGCGGTACGAATGTG
AAACCTGCGATGACCAGTTTTTGACTCAATGGGAAGTGAAGGAACATATG
GATGACTACAGACACCACGCACCCAAGATTCCTTGCGAGACATGCGGGAG
GAAGTTCTACAATCAAACGTCAGCGGATCAGCACATGAATGCAATGGACC
ATTGGGCTCCAACATGGCCATGTGAGACTTGCACGCAGATGTTCCATACG
GAAGGTGCTGCAGAACAGCATATGCAGGCCAAATCCCATTACAAGAACTA
CTGCCACCCCTGTAACCGGCGTTTCGATACCGAGAATAACCTCAAGATGC
ACTTGAGTTCGAAGATTCACCGCGGTCAAGACATCTTCTGTCCTTTTTGC
AACGCTGCTTTTACTACGGCCACTGGCGTCGCTCACCACCTTGAAACCGG
CTCCTGCAAACGTGCTACAGGCCTCAATCGCGAGACTATCTACAAATTCG
TTCGCAGCCGTGACACCCAAGGCGTCATTACAAGGAAGCTGCTTGAATGG
AATGAGGATGACAACATTCAATACAAGGCTAATTCCCGTGCATACAACGG
CGCCTACTGGGAGTGCTACTTGTGTCATCGGGAATTCAACAGCTTGACCG
CACTTAATCAACATCTCAATTCGCCCGTGCACAAGCAGAAGCTATATCAT
TGTCCGAACGCGAAGTGTAGGAAGCAGTTTGTTACTATAGCTGCTCTGTT
TAATCACCTGGAAAGCGAATCTTGCGCCTTTATGCGATTCGAGAAGGTAC
AGCGGCAGGTTCAGAATGTGTTCCGTGACCAGAGAGCTATTGCATTCTGA
ATGTACGACTGTGAAACCTGCCCTCGCTACTTCAACAGCTGGTATGCCTG
TCGCCAGCACATGAACGACACGGGCCATTGGGGCGTGCGGTACGAATGTG
AAACCTGCGATGACCAGTTTTTGACTCAATGGGAAGTGAAGGAACATATG
GATGACTACAGACACCACGCACCCAAGATTCCTTGCGAGACATGCGGGAG
GAAGTTCTACAATCAAACGTCAGCGGATCAGCACATGAATGCAATGGACC
ATTGGGCTCCAACATGGCCATGTGAGACTTGCACGCAGATGTTCCATACG
GAAGGTGCTGCAGAACAGCATATGCAGGCCAAATCCCATTACAAGAACTA
CTGCCACCCCTGTAACCGGCGTTTCGATACCGAGAATAACCTCAAGATGC
ACTTGAGTTCGAAGATTCACCGCGGTCAAGACATCTTCTGTCCTTTTTGC
AACGCTGCTTTTACTACGGCCACTGGCGTCGCTCACCACCTTGAAACCGG
CTCCTGCAAACGTGCTACAGGCCTCAATCGCGAGACTATCTACAAATTCG
TTCGCAGCCGTGACACCCAAGGCGTCATTACAAGGAAGCTGCTTGAATGG
AATGAGGATGACAACATTCAATACAAGGCTAATTCCCGTGCATACAACGG
CGCCTACTGGGAGTGCTACTTGTGTCATCGGGAATTCAACAGCTTGACCG
CACTTAATCAACATCTCAATTCGCCCGTGCACAAGCAGAAGCTATATCAT
TGTCCGAACGCGAAGTGTAGGAAGCAGTTTGTTACTATAGCTGCTCTGTT
TAATCACCTGGAAAGCGAATCTTGCGCCTTTATGCGATTCGAGAAGGTAC
AGCGGCAGGTTCAGAATGTGTTCCGTGACCAGAGAGCTATTGCATTCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003471CBS51388_003471Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003471-T1.exon1CBS51388_003471-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_003471-T1.exon2CBS51388_003471-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003471-T1.cdsCBS51388_003471-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003471-T1CBS51388_003471-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR022755
DBxrefInterPro:IPR013087
DBxrefPFAM:PF12874
DBxrefPFAM:PF12171
DBxrefPFAM:PF13912
DBxrefPFAM:PF12756
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:1615578..1616531 +
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