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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:1627740..1629299- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003474-T1 ID=CBS51388_003474-T1|Name=CBS51388_003474-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1560bp|location=Sequence derived from alignment at An04:1627740..1629299- (Aspergillus niger CBS 513.88)
ATGCGGTCAATTCTGGGTCGAGTTCCTCGAGTCGGGCATGTCCTCCCACA
AGTTCCGCGTGCACGATGGAACACCTGCAGTACTGCTCCTGCTATATTAG
GCGCTGCGACGACGAGAGGAGGGTACAATGGGAGTGCGCATATGCAGCCC
AATAGTGGTGCGGTCTGGATGCCACTAGACCGGAGGTGGTTCCGTGCAGG
AATTCCTGGTGGTAGCGGGATGAGAAACACCCGGACGAAAGAGCAATTGG
AGAGGTTGAGATTGAGGGATCGGACGGGGGTTGTGCAGGAGGAGCAGAAG
GGAGGAGACTCAGGGGGGAAGTTGGAGGATGCGATGACGAAGGGTATATC
TCTATCTTTTCCTGTTCTTCAAAACCAGGGCATGTGTTAATACTGTACAG
GCAAGCTATTAACGACACCGTCGAGGTTATTCAAGCTGTTGATTCCGCTG
TCGACCGGCTATCAGGGGGAGCATAAAGGTATATCTCACTGAAATTCATG
GCATTGTGGAAGAGAGTGTACTGACGACACAGACATCGAACCAATAGCTA
TTCTCGTCCACCCCCAACAACCACTCTCCCACCTGGAACGACTAATCCAG
TCTGAAGTCCCAGCCATTAAGAAAGAAGACGGCCAAACCCGCCCCCCAAC
CGTCTCCTTCATCGCCCTCCAAATCGAAGACCACCCCATTCGGCCCCGAA
AAGCCGTCTACGAAGGCACCGGCGCAGAAGTCCACCAGCTCGACGAAATG
GGTCGCATCGATGACGGCGAAGGCAAGCGGATCCCCACAGAAGACGATAC
ATACACGTACCTGCGCCGCACGGAGCCCAGCAAGAAGGGAGAAGAATCAG
AAGGCGGCGGCAGGAGAGAGCAGCGCTTCGTACGCTGGTCACAATCCACC
GAAATTGGAGACTTTATCCGCGACGCAGCACGGGCCCGGGAATTCATCGT
CTCCGTGGAAGGCGCACCAGCCGGGGTGCATCAGATCCGAGTAGCGGTGC
CATCGTTCGACGAGCGGACGTACTTCCTGCGAATGAGACTGCGGAAGATC
TCCGGGCGGATCAAGGGCATCGCGGAGATCAAGCACGAGTGTGATGCGCT
AGCGCACCGGGGAGCACAGCGGGTGGCGATGGGAGGGCTGGGAATCCTGG
CAATGTGGTGGTACCTCGTGTACAGGTTGACGTTTGAGACGGATCTGGGC
TGGGATACGATGGAGCCGGTGACGTATCTGGTGAGTTTGTCGACGCTGAT
GGGGGGATATCTCTGGTTTCTGTACCATAACCGGGAGATATCGTACCGGT
CAGCGTTGGATTTTACGATCAATGCGCGGCAGAAGAAGCTGTATCAGGAG
AAGGGGATTGATTTGCAGTTGTGGGAGTCATTGATTGACGAGGGAAATAC
GTTGCGCAAGGAGATCAAGAATATTGCGGCGGAGTATGATGTGGAGTGGG
ATGAGAGGAAGGATGAAAGGGACCAGAGAGTCACGGAGGCGTTGAAGCAG
GAGAGGACGCAGAAGAATGGAAATAAGAGGAGAGGTGATGAGGAGGAGGA
TGGAGATTAG back to topCoding sequence (CDS) from alignment at An04:1627740..1629299- >CBS51388_003474-T1 ID=CBS51388_003474-T1|Name=CBS51388_003474-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4347bp|location=Sequence derived from alignment at An04:1627740..1629299- (Aspergillus niger CBS 513.88)
ACATCGAACCAATAGCTATTCTCGTCCACCCCCAACAACCACTCTCCCAC
CTGGAACGACTAATCCAGTCTGAAGTCCCAGCCATTAAGAAAGAAGACGG
CCAAACCCGCCCCCCAACCGTCTCCTTCATCGCCCTCCAAATCGAAGACC
ACCCCATTCGGCCCCGAAAAGCCGTCTACGAAGGCACCGGCGCAGAAGTC
CACCAGCTCGACGAAATGGGTCGCATCGATGACGGCGAAGGCAAGCGGAT
CCCCACAGAAGACGATACATACACGTACCTGCGCCGCACGGAGCCCAGCA
AGAAGGGAGAAGAATCAGAAGGCGGCGGCAGGAGAGAGCAGCGCTTCGTA
CGCTGGTCACAATCCACCGAAATTGGAGACTTTATCCGCGACGCAGCACG
GGCCCGGGAATTCATCGTCTCCGTGGAAGGCGCACCAGCCGGGGTGCATC
AGATCCGAGTAGCGGTGCCATCGTTCGACGAGCGGACGTACTTCCTGCGA
ATGAGACTGCGGAAGATCTCCGGGCGGATCAAGGGCATCGCGGAGATCAA
GCACGAGTGTGATGCGCTAGCGCACCGGGGAGCACAGCGGGTGGCGATGG
GAGGGCTGGGAATCCTGGCAATGTGGTGGTACCTCGTGTACAGGTTGACG
TTTGAGACGGATCTGGGCTGGGATACGATGGAGCCGGTGACGTATCTGGT
GAGTTTGTCGACGCTGATGGGGGGATATCTCTGGTTTCTGTACCATAACC
GGGAGATATCGTACCGGTCAGCGTTGGATTTTACGATCAATGCGCGGCAG
AAGAAGCTGTATCAGGAGAAGGGGATTGATTTGCAGTTGTGGGAGTCATT
GATTGACGAGGGAAATACGTTGCGCAAGGAGATCAAGAATATTGCGGCGG
AGTATGATGTGGAGTGGGATGAGAGGAAGGATGAAAGGGACCAGAGAGTC
ACGGAGGCGTTGAAGCAGGAGAGGACGCAGAAGAATGGAAATAAGAGGAG
AGGTGATGAGGAGGAGGATGGAGATTAGGCAAGCTATTAACGACACCGTC
GAGGTTATTCAAGCTGTTGATTCCGCTGTCGACCGGCTATCAGGGGGAGC
ATAAAGATGCGGTCAATTCTGGGTCGAGTTCCTCGAGTCGGGCATGTCCT
CCCACAAGTTCCGCGTGCACGATGGAACACCTGCAGTACTGCTCCTGCTA
TATTAGGCGCTGCGACGACGAGAGGAGGGTACAATGGGAGTGCGCATATG
CAGCCCAATAGTGGTGCGGTCTGGATGCCACTAGACCGGAGGTGGTTCCG
TGCAGGAATTCCTGGTGGTAGCGGGATGAGAAACACCCGGACGAAAGAGC
AATTGGAGAGGTTGAGATTGAGGGATCGGACGGGGGTTGTGCAGGAGGAG
CAGAAGGGAGGAGACTCAGGGGGGAAGTTGGAGGATGCGATGACGAAGGA
CATCGAACCAATAGCTATTCTCGTCCACCCCCAACAACCACTCTCCCACC
TGGAACGACTAATCCAGTCTGAAGTCCCAGCCATTAAGAAAGAAGACGGC
CAAACCCGCCCCCCAACCGTCTCCTTCATCGCCCTCCAAATCGAAGACCA
CCCCATTCGGCCCCGAAAAGCCGTCTACGAAGGCACCGGCGCAGAAGTCC
ACCAGCTCGACGAAATGGGTCGCATCGATGACGGCGAAGGCAAGCGGATC
CCCACAGAAGACGATACATACACGTACCTGCGCCGCACGGAGCCCAGCAA
GAAGGGAGAAGAATCAGAAGGCGGCGGCAGGAGAGAGCAGCGCTTCGTAC
GCTGGTCACAATCCACCGAAATTGGAGACTTTATCCGCGACGCAGCACGG
GCCCGGGAATTCATCGTCTCCGTGGAAGGCGCACCAGCCGGGGTGCATCA
GATCCGAGTAGCGGTGCCATCGTTCGACGAGCGGACGTACTTCCTGCGAA
TGAGACTGCGGAAGATCTCCGGGCGGATCAAGGGCATCGCGGAGATCAAG
CACGAGTGTGATGCGCTAGCGCACCGGGGAGCACAGCGGGTGGCGATGGG
AGGGCTGGGAATCCTGGCAATGTGGTGGTACCTCGTGTACAGGTTGACGT
TTGAGACGGATCTGGGCTGGGATACGATGGAGCCGGTGACGTATCTGGTG
AGTTTGTCGACGCTGATGGGGGGATATCTCTGGTTTCTGTACCATAACCG
GGAGATATCGTACCGGTCAGCGTTGGATTTTACGATCAATGCGCGGCAGA
AGAAGCTGTATCAGGAGAAGGGGATTGATTTGCAGTTGTGGGAGTCATTG
ATTGACGAGGGAAATACGTTGCGCAAGGAGATCAAGAATATTGCGGCGGA
GTATGATGTGGAGTGGGATGAGAGGAAGGATGAAAGGGACCAGAGAGTCA
CGGAGGCGTTGAAGCAGGAGAGGACGCAGAAGAATGGAAATAAGAGGAGA
GGTGATGAGGAGGAGGATGGAGATTAGGCAAGCTATTAACGACACCGTCG
AGGTTATTCAAGCTGTTGATTCCGCTGTCGACCGGCTATCAGGGGGAGCA
TAAAGATGCGGTCAATTCTGGGTCGAGTTCCTCGAGTCGGGCATGTCCTC
CCACAAGTTCCGCGTGCACGATGGAACACCTGCAGTACTGCTCCTGCTAT
ATTAGGCGCTGCGACGACGAGAGGAGGGTACAATGGGAGTGCGCATATGC
AGCCCAATAGTGGTGCGGTCTGGATGCCACTAGACCGGAGGTGGTTCCGT
GCAGGAATTCCTGGTGGTAGCGGGATGAGAAACACCCGGACGAAAGAGCA
ATTGGAGAGGTTGAGATTGAGGGATCGGACGGGGGTTGTGCAGGAGGAGC
AGAAGGGAGGAGACTCAGGGGGGAAGTTGGAGGATGCGATGACGAAGGAC
ATCGAACCAATAGCTATTCTCGTCCACCCCCAACAACCACTCTCCCACCT
GGAACGACTAATCCAGTCTGAAGTCCCAGCCATTAAGAAAGAAGACGGCC
AAACCCGCCCCCCAACCGTCTCCTTCATCGCCCTCCAAATCGAAGACCAC
CCCATTCGGCCCCGAAAAGCCGTCTACGAAGGCACCGGCGCAGAAGTCCA
CCAGCTCGACGAAATGGGTCGCATCGATGACGGCGAAGGCAAGCGGATCC
CCACAGAAGACGATACATACACGTACCTGCGCCGCACGGAGCCCAGCAAG
AAGGGAGAAGAATCAGAAGGCGGCGGCAGGAGAGAGCAGCGCTTCGTACG
CTGGTCACAATCCACCGAAATTGGAGACTTTATCCGCGACGCAGCACGGG
CCCGGGAATTCATCGTCTCCGTGGAAGGCGCACCAGCCGGGGTGCATCAG
ATCCGAGTAGCGGTGCCATCGTTCGACGAGCGGACGTACTTCCTGCGAAT
GAGACTGCGGAAGATCTCCGGGCGGATCAAGGGCATCGCGGAGATCAAGC
ACGAGTGTGATGCGCTAGCGCACCGGGGAGCACAGCGGGTGGCGATGGGA
GGGCTGGGAATCCTGGCAATGTGGTGGTACCTCGTGTACAGGTTGACGTT
TGAGACGGATCTGGGCTGGGATACGATGGAGCCGGTGACGTATCTGGTGA
GTTTGTCGACGCTGATGGGGGGATATCTCTGGTTTCTGTACCATAACCGG
GAGATATCGTACCGGTCAGCGTTGGATTTTACGATCAATGCGCGGCAGAA
GAAGCTGTATCAGGAGAAGGGGATTGATTTGCAGTTGTGGGAGTCATTGA
TTGACGAGGGAAATACGTTGCGCAAGGAGATCAAGAATATTGCGGCGGAG
TATGATGTGGAGTGGGATGAGAGGAAGGATGAAAGGGACCAGAGAGTCAC
GGAGGCGTTGAAGCAGGAGAGGACGCAGAAGAATGGAAATAAGAGGAGAG
GTGATGAGGAGGAGGATGGAGATTAGGCAAGCTATTAACGACACCGTCGA
GGTTATTCAAGCTGTTGATTCCGCTGTCGACCGGCTATCAGGGGGAGCAT
AAAGATGCGGTCAATTCTGGGTCGAGTTCCTCGAGTCGGGCATGTCCTCC
CACAAGTTCCGCGTGCACGATGGAACACCTGCAGTACTGCTCCTGCTATA
TTAGGCGCTGCGACGACGAGAGGAGGGTACAATGGGAGTGCGCATATGCA
GCCCAATAGTGGTGCGGTCTGGATGCCACTAGACCGGAGGTGGTTCCGTG
CAGGAATTCCTGGTGGTAGCGGGATGAGAAACACCCGGACGAAAGAGCAA
TTGGAGAGGTTGAGATTGAGGGATCGGACGGGGGTTGTGCAGGAGGAGCA
GAAGGGAGGAGACTCAGGGGGGAAGTTGGAGGATGCGATGACGAAGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006769 |
| DBxref | PFAM:PF04678 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:1627740..1629299 - |
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