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CBS51388_003601-T1, CBS51388_003601-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003601-T1
Unique NameCBS51388_003601-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:2061807..2062159-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003601-T1 ID=CBS51388_003601-T1|Name=CBS51388_003601-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=353bp|location=Sequence derived from alignment at An04:2061807..2062159- (Aspergillus niger CBS 513.88)
ATGCTGGATGAGTTCCTCTCCCTGAACCCGAACGCCGCCTCCTCCCGTGA
CCCGGTGCCCTTCCCCTCCCTCAAGACCTACATTCAGGCGTACCAGGACC
CACACCAGGTGGATAGCATCCTCAAGATTCAGAAGGAGCTGGACGAGACC
AAGATCGTTTTGCATAAGACTATCGAGAGCGTATGTTCTGCGCGCATTAC
ATGTGGGCAGAATGGTGCTAACTCCCCAACCAGGTCCTCGAGCGCGGAGA
GAAGATTGACGATCTCGTGTCCAAGTCGGAGGGGCTCAGTGCCCAGTCGA
AGATGTTCTACACCTCTGCGAAGAAGCAGAATTCGTGCTGTGTGATCATG
TGA
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Coding sequence (CDS) from alignment at An04:2061807..2062159-

>CBS51388_003601-T1 ID=CBS51388_003601-T1|Name=CBS51388_003601-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=600bp|location=Sequence derived from alignment at An04:2061807..2062159- (Aspergillus niger CBS 513.88)
GTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTGTCCAAGTCGGAGGG
GCTCAGTGCCCAGTCGAAGATGTTCTACACCTCTGCGAAGAAGCAGAATT
CGTGCTGTGTGATCATGTGAATGCTGGATGAGTTCCTCTCCCTGAACCCG
AACGCCGCCTCCTCCCGTGACCCGGTGCCCTTCCCCTCCCTCAAGACCTA
CATTCAGGCGTACCAGGACCCACACCAGGTGGATAGCATCCTCAAGATTC
AGAAGGAGCTGGACGAGACCAAGATCGTTTTGCATAAGACTATCGAGAGC
GTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTGTCCAAGTCGGAGGG
GCTCAGTGCCCAGTCGAAGATGTTCTACACCTCTGCGAAGAAGCAGAATT
CGTGCTGTGTGATCATGTGAATGCTGGATGAGTTCCTCTCCCTGAACCCG
AACGCCGCCTCCTCCCGTGACCCGGTGCCCTTCCCCTCCCTCAAGACCTA
CATTCAGGCGTACCAGGACCCACACCAGGTGGATAGCATCCTCAAGATTC
AGAAGGAGCTGGACGAGACCAAGATCGTTTTGCATAAGACTATCGAGAGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YKT6CBS51388_003601Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003601-T1CBS51388_003601-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003601-T1.cdsCBS51388_003601-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003601-T1.exon2CBS51388_003601-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003601-T1.exon1CBS51388_003601-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR011012
DBxrefInterPro:IPR042855
DBxrefInterPro:IPR001388
DBxrefPFAM:PF00957
Productpalmitoyltransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:2061807..2062159 -
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