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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:2125711..2127281- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003623-T1 ID=CBS51388_003623-T1|Name=CBS51388_003623-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1571bp|location=Sequence derived from alignment at An04:2125711..2127281- (Aspergillus niger CBS 513.88)
ATGGAATACCTGCCTAGTCTGCAGCAAGAATTCGATGAGCTGAAGCCATC
GCTGTTCGGTACGTGCCCTTGGCGCACACCCCAAGCTATGTCAACGAACA
CTCGACTAACCCGCATCCCATCGCAGAGCTACTCGCCGAACAACAGCTGT
CCGACCTTTTGCCTCCCTCAATCCGATACATCCTTGCCGTCGCGACCCAT
CGCCATCCACGATATCTCCTTCGAATTCTCAACTCCTACGACGAGATCTA
CGCGCTGCTCTCCCTCGTCGTCGAACGCTACTACCTGCGCACCTTCGGCG
GCTCCTTCACAGAGAACTTCTACTCCCTCAAACGCGAACGAGTCCTCCTC
ACCAAGAATGGCGAGATCCCTCGTGCCCAGCTGGGCGCTCCAGGCCCCGT
CCGCGAAGCCCTCAAGCTCCGCACCTCAGACGTCTGGAAGAACCTCCTCG
TCCTAGTCGGAATTCCCTACCTAAAGCGCAAGCTCGACGAAGGCTACGAC
ATCCACGCCGCACCACAAGCATCCCTAATTATGAGCGGTGGCCCTCGATA
CAACCCAGGCGATGACCTCCCTCATAATCCAACAATCCGCCAACGTCTCC
TCCACTACTACAAGTGGTTCCTCCGCAACATCTACCCCTCCGTCAACGCC
GCATACTACTTCTCCATCCTCGCCTTCAACCTCGCCTACCTCTTCGACAA
CACAAAATACTCCTCCCCCTTCCTCTGGCTCATCGGCACCCGCATCCGTC
GTCTCAGCTCCGCCGACCACCGGGCCATCGCCTCCATCCTCGACCCCAAG
CCCCCTCCCCCAGGTCCCGGTGGCGCAGGCGCCCGCACCCGCCCTGGCTC
CGGCCTCCTGGGCCTCCTCAGCCCGCAGAACTTCTACCCCCAACTTCTCA
CCTCTCTCCGCTACTTCCTCCCAGCTTCCATCTTCGCCCTCAAGTTCCTC
GAATGGTGGCACGCAAGTGACTTCTCGCGCCAGCTCGCCCGCAAAGCAAC
CGAGGTCCTGGACCTTCCTGCCCCTGTCGCAGCGGGAATGACGCCTCCCT
CGGAGAAGCGAAAGGCAGCCGCCGCGGCCGCAGCCACAGAGAAACAACAA
CAGCAACAGCCATCATCCCCAACCCTCAAATCAGCATTGAAATCAGCCCC
TCCCGTGCGCACACGCATCCAACCGCCCATCTCGGCTACCTCGTATCTAC
CCATCTTCACTGTTCCACTTCCCCCGCCGGAATCGGATGTCGCGTCCGCG
TGCCCGATCTGTTTGAATGCGCTTACGAACCCTACGGCGTGTCAGACGGG
GTATGTTTTTTGCTACGTGTGTATCTTCCACTGGTTGAATGGGGAGCATC
AGCGGCAATTGGATTTCATGAATGGGGAGGGTGCGGGCGCTGCGTGGGCC
GATGATGATTTGGAGGGGGGTGAGGAAGTGAAACAGGGTGATGATGATGA
GGAGGAGATGAAGGAGTCGAGGAGTAGACGGGGGAAGTGGGAGAGTGGGA
AGGGAAGGTGTCCGGTTACGGGGAGAAGGGTACTTGGTGGGACGGAGGGG
TTGAGGAGGGTGTTGGTGTAG back to topCoding sequence (CDS) from alignment at An04:2125711..2127281- >CBS51388_003623-T1 ID=CBS51388_003623-T1|Name=CBS51388_003623-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3006bp|location=Sequence derived from alignment at An04:2125711..2127281- (Aspergillus niger CBS 513.88)
AGCTACTCGCCGAACAACAGCTGTCCGACCTTTTGCCTCCCTCAATCCGA
TACATCCTTGCCGTCGCGACCCATCGCCATCCACGATATCTCCTTCGAAT
TCTCAACTCCTACGACGAGATCTACGCGCTGCTCTCCCTCGTCGTCGAAC
GCTACTACCTGCGCACCTTCGGCGGCTCCTTCACAGAGAACTTCTACTCC
CTCAAACGCGAACGAGTCCTCCTCACCAAGAATGGCGAGATCCCTCGTGC
CCAGCTGGGCGCTCCAGGCCCCGTCCGCGAAGCCCTCAAGCTCCGCACCT
CAGACGTCTGGAAGAACCTCCTCGTCCTAGTCGGAATTCCCTACCTAAAG
CGCAAGCTCGACGAAGGCTACGACATCCACGCCGCACCACAAGCATCCCT
AATTATGAGCGGTGGCCCTCGATACAACCCAGGCGATGACCTCCCTCATA
ATCCAACAATCCGCCAACGTCTCCTCCACTACTACAAGTGGTTCCTCCGC
AACATCTACCCCTCCGTCAACGCCGCATACTACTTCTCCATCCTCGCCTT
CAACCTCGCCTACCTCTTCGACAACACAAAATACTCCTCCCCCTTCCTCT
GGCTCATCGGCACCCGCATCCGTCGTCTCAGCTCCGCCGACCACCGGGCC
ATCGCCTCCATCCTCGACCCCAAGCCCCCTCCCCCAGGTCCCGGTGGCGC
AGGCGCCCGCACCCGCCCTGGCTCCGGCCTCCTGGGCCTCCTCAGCCCGC
AGAACTTCTACCCCCAACTTCTCACCTCTCTCCGCTACTTCCTCCCAGCT
TCCATCTTCGCCCTCAAGTTCCTCGAATGGTGGCACGCAAGTGACTTCTC
GCGCCAGCTCGCCCGCAAAGCAACCGAGGTCCTGGACCTTCCTGCCCCTG
TCGCAGCGGGAATGACGCCTCCCTCGGAGAAGCGAAAGGCAGCCGCCGCG
GCCGCAGCCACAGAGAAACAACAACAGCAACAGCCATCATCCCCAACCCT
CAAATCAGCATTGAAATCAGCCCCTCCCGTGCGCACACGCATCCAACCGC
CCATCTCGGCTACCTCGTATCTACCCATCTTCACTGTTCCACTTCCCCCG
CCGGAATCGGATGTCGCGTCCGCGTGCCCGATCTGTTTGAATGCGCTTAC
GAACCCTACGGCGTGTCAGACGGGGTATGTTTTTTGCTACGTGTGTATCT
TCCACTGGTTGAATGGGGAGCATCAGCGGCAATTGGATTTCATGAATGGG
GAGGGTGCGGGCGCTGCGTGGGCCGATGATGATTTGGAGGGGGGTGAGGA
AGTGAAACAGGGTGATGATGATGAGGAGGAGATGAAGGAGTCGAGGAGTA
GACGGGGGAAGTGGGAGAGTGGGAAGGGAAGGTGTCCGGTTACGGGGAGA
AGGGTACTTGGTGGGACGGAGGGGTTGAGGAGGGTGTTGGTGTAGATGGA
ATACCTGCCTAGTCTGCAGCAAGAATTCGATGAGCTGAAGCCATCGCTGT
TCGAGCTACTCGCCGAACAACAGCTGTCCGACCTTTTGCCTCCCTCAATC
CGATACATCCTTGCCGTCGCGACCCATCGCCATCCACGATATCTCCTTCG
AATTCTCAACTCCTACGACGAGATCTACGCGCTGCTCTCCCTCGTCGTCG
AACGCTACTACCTGCGCACCTTCGGCGGCTCCTTCACAGAGAACTTCTAC
TCCCTCAAACGCGAACGAGTCCTCCTCACCAAGAATGGCGAGATCCCTCG
TGCCCAGCTGGGCGCTCCAGGCCCCGTCCGCGAAGCCCTCAAGCTCCGCA
CCTCAGACGTCTGGAAGAACCTCCTCGTCCTAGTCGGAATTCCCTACCTA
AAGCGCAAGCTCGACGAAGGCTACGACATCCACGCCGCACCACAAGCATC
CCTAATTATGAGCGGTGGCCCTCGATACAACCCAGGCGATGACCTCCCTC
ATAATCCAACAATCCGCCAACGTCTCCTCCACTACTACAAGTGGTTCCTC
CGCAACATCTACCCCTCCGTCAACGCCGCATACTACTTCTCCATCCTCGC
CTTCAACCTCGCCTACCTCTTCGACAACACAAAATACTCCTCCCCCTTCC
TCTGGCTCATCGGCACCCGCATCCGTCGTCTCAGCTCCGCCGACCACCGG
GCCATCGCCTCCATCCTCGACCCCAAGCCCCCTCCCCCAGGTCCCGGTGG
CGCAGGCGCCCGCACCCGCCCTGGCTCCGGCCTCCTGGGCCTCCTCAGCC
CGCAGAACTTCTACCCCCAACTTCTCACCTCTCTCCGCTACTTCCTCCCA
GCTTCCATCTTCGCCCTCAAGTTCCTCGAATGGTGGCACGCAAGTGACTT
CTCGCGCCAGCTCGCCCGCAAAGCAACCGAGGTCCTGGACCTTCCTGCCC
CTGTCGCAGCGGGAATGACGCCTCCCTCGGAGAAGCGAAAGGCAGCCGCC
GCGGCCGCAGCCACAGAGAAACAACAACAGCAACAGCCATCATCCCCAAC
CCTCAAATCAGCATTGAAATCAGCCCCTCCCGTGCGCACACGCATCCAAC
CGCCCATCTCGGCTACCTCGTATCTACCCATCTTCACTGTTCCACTTCCC
CCGCCGGAATCGGATGTCGCGTCCGCGTGCCCGATCTGTTTGAATGCGCT
TACGAACCCTACGGCGTGTCAGACGGGGTATGTTTTTTGCTACGTGTGTA
TCTTCCACTGGTTGAATGGGGAGCATCAGCGGCAATTGGATTTCATGAAT
GGGGAGGGTGCGGGCGCTGCGTGGGCCGATGATGATTTGGAGGGGGGTGA
GGAAGTGAAACAGGGTGATGATGATGAGGAGGAGATGAAGGAGTCGAGGA
GTAGACGGGGGAAGTGGGAGAGTGGGAAGGGAAGGTGTCCGGTTACGGGG
AGAAGGGTACTTGGTGGGACGGAGGGGTTGAGGAGGGTGTTGGTGTAGAT
GGAATACCTGCCTAGTCTGCAGCAAGAATTCGATGAGCTGAAGCCATCGC
TGTTCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR006845 |
| DBxref | InterPro:IPR001841 |
| DBxref | PFAM:PF04757 |
| Product | ubiquitin-protein ligase peroxin 12 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:2125711..2127281 - |
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