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CBS51388_003672-T1, CBS51388_003672-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003672-T1
Unique NameCBS51388_003672-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:2283580..2285287+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003672-T1 ID=CBS51388_003672-T1|Name=CBS51388_003672-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1708bp|location=Sequence derived from alignment at An04:2283580..2285287+ (Aspergillus niger CBS 513.88)
ATGGGAAAGTCAACTTCAGTCACTAGCACAGCCAGAGAATCCGGAGACGA
TAGCCTCTCCCATACAGAAAATGGAACGGTCATTGAATACCACGAAACCA
AGCGTGGTCTTTCTTCTCGCCATGTGCAGTTGATGGCCATTGGGGGATCG
ATTGGAACAGGCCTATTTGTCGGTATTGGTTCTTACCTCCGCGATGCCGG
GCCTCTGTCCCTGTTCCTGGGGTATCTCTTCTATGGCGTTCTGTTCATCT
GGCCCACAAACCTATGCGTGGGTGAGATGTGCGCCTACCTGCCAATCCGA
GGATCTATCTTCGAACTAGCAGCGCGGTACATCGATCCAGCCTTCGGATT
TGCAATGTACGTGAGCCCGAGACATCTCCAACTCATACACTGACATCTGT
AGGGGCTGGGTATACTTTTACGGCGGACTCATGCTTCTCTGCACCGAGTA
TTCCGCTGTGGCGACGGTGATGCAGTACTGGAATACCAGCGTCAACCCAG
CCGTCTGGGTCGCCATGGCCATGGTCGTATGCTTCCTCCTGAACATCGTC
GCCGTCAAATACTATGGAGAGACCGAATTCATCATGGCCTCCACCAAGAT
CCTCCTTCTCATCGGTCTGGTCCTCTTGACCTTCATCACCATGCTCGGCG
GAAATCCCCACCACGACATCTACGGCTTCCGCAACTGGACACACGGCGTC
ATGTACGAATACTATACCACTGGCAACACCGGCCGCTTCCTGGGCTGGTT
CTCCGTGGTCGTGTACGCCGCTTTCTCCGTCGCTGGACCCGACCTTCCAG
CCCTGGCCGCCGGCGAGATCGAAAACCCGCGCTTCACGATTCCCCGCGTC
GTCAAAATGACCTTCTACCGTATCGTCGGCTTTTACGTCATTGGTGTCCT
CGCCGTGAGTATCATCTGCTCCCCAAACGACCCTCGTCTCATAAGCGCCA
TCGAATCCTCTGCTGCTGGATCCGCCGCCTCTCCATGGGTGATTGGCATC
CAGAATCTCGGCATCCACGGCCTTCCCGGCTTCATCAACTTTCTCATCCT
CCTAGCCGGCTGGTCCTGCGGAAATGCCTACCTCTACAGCTCCAGCCGCA
CCCTCTACTCGCTCGCACGCGATCACCAAGCCCCTGCCTTTCTCCTGAAA
TGTACCTCCGCCGGAGTCCCCATCAACTGCGTTCTCGTCGTCTCCCTCCT
CTCTTGCATCACATTCCTCGTCGCCGATACCTCTGCCGTCACGGTCTTCT
ACTGGTTCGTCGACCTCACGACCACCGCCTTTATCCTCACCTACACCGGC
ATGGTCTGTGTTTTCCTAGCCTGGTATCGTGCGCTCAAGGCACAGGGCAT
CGATCGGAAGACATTCCTCCCCTGGGCGTCACCGTGTCAGCCGTACGCAG
CTATCGTGGCATTGATCATTGGGTGCTTGGTGACGCTGTTTAATGGGTTC
ACGGTGTTTGTCCCGTTCAGTGTCGAGGGGTTTATCACTTCGTACTTCGG
CGTGGCGTTCTGGGCCGTCATGTTCCTGTTTTGGAAGGTGTATCAGGGCA
CGAAGTGGGTGGATCCGGCAAAGGCTGATATATTTTCTGGCAAGGCTGAG
GTCGACGCTGAGTGTCGGGTTTGGGAAGATGGAGGGTTCTTGGAGCGGCG
GAGGGCGGAGTTGGCAAAGATGCATTGGGCGAGAAGGTGGTGGGAGAAGA
TGTGGTAG
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Coding sequence (CDS) from alignment at An04:2283580..2285287+

>CBS51388_003672-T1 ID=CBS51388_003672-T1|Name=CBS51388_003672-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3324bp|location=Sequence derived from alignment at An04:2283580..2285287+ (Aspergillus niger CBS 513.88)
ATGGGAAAGTCAACTTCAGTCACTAGCACAGCCAGAGAATCCGGAGACGA
TAGCCTCTCCCATACAGAAAATGGAACGGTCATTGAATACCACGAAACCA
AGCGTGGTCTTTCTTCTCGCCATGTGCAGTTGATGGCCATTGGGGGATCG
ATTGGAACAGGCCTATTTGTCGGTATTGGTTCTTACCTCCGCGATGCCGG
GCCTCTGTCCCTGTTCCTGGGGTATCTCTTCTATGGCGTTCTGTTCATCT
GGCCCACAAACCTATGCGTGGGTGAGATGTGCGCCTACCTGCCAATCCGA
GGATCTATCTTCGAACTAGCAGCGCGGTACATCGATCCAGCCTTCGGATT
TGCAATGGGCTGGGTATACTTTTACGGCGGACTCATGCTTCTCTGCACCG
AGTATTCCGCTGTGGCGACGGTGATGCAGTACTGGAATACCAGCGTCAAC
CCAGCCGTCTGGGTCGCCATGGCCATGGTCGTATGCTTCCTCCTGAACAT
CGTCGCCGTCAAATACTATGGAGAGACCGAATTCATCATGGCCTCCACCA
AGATCCTCCTTCTCATCGGTCTGGTCCTCTTGACCTTCATCACCATGCTC
GGCGGAAATCCCCACCACGACATCTACGGCTTCCGCAACTGGACACACGG
CGTCATGTACGAATACTATACCACTGGCAACACCGGCCGCTTCCTGGGCT
GGTTCTCCGTGGTCGTGTACGCCGCTTTCTCCGTCGCTGGACCCGACCTT
CCAGCCCTGGCCGCCGGCGAGATCGAAAACCCGCGCTTCACGATTCCCCG
CGTCGTCAAAATGACCTTCTACCGTATCGTCGGCTTTTACGTCATTGGTG
TCCTCGCCGTGAGTATCATCTGCTCCCCAAACGACCCTCGTCTCATAAGC
GCCATCGAATCCTCTGCTGCTGGATCCGCCGCCTCTCCATGGGTGATTGG
CATCCAGAATCTCGGCATCCACGGCCTTCCCGGCTTCATCAACTTTCTCA
TCCTCCTAGCCGGCTGGTCCTGCGGAAATGCCTACCTCTACAGCTCCAGC
CGCACCCTCTACTCGCTCGCACGCGATCACCAAGCCCCTGCCTTTCTCCT
GAAATGTACCTCCGCCGGAGTCCCCATCAACTGCGTTCTCGTCGTCTCCC
TCCTCTCTTGCATCACATTCCTCGTCGCCGATACCTCTGCCGTCACGGTC
TTCTACTGGTTCGTCGACCTCACGACCACCGCCTTTATCCTCACCTACAC
CGGCATGGTCTGTGTTTTCCTAGCCTGGTATCGTGCGCTCAAGGCACAGG
GCATCGATCGGAAGACATTCCTCCCCTGGGCGTCACCGTGTCAGCCGTAC
GCAGCTATCGTGGCATTGATCATTGGGTGCTTGGTGACGCTGTTTAATGG
GTTCACGGTGTTTGTCCCGTTCAGTGTCGAGGGGTTTATCACTTCGTACT
TCGGCGTGGCGTTCTGGGCCGTCATGTTCCTGTTTTGGAAGGTGTATCAG
GGCACGAAGTGGGTGGATCCGGCAAAGGCTGATATATTTTCTGGCAAGGC
TGAGGTCGACGCTGAGTGTCGGGTTTGGGAAGATGGAGGGTTCTTGGAGC
GGCGGAGGGCGGAGTTGGCAAAGATGCATTGGGCGAGAAGGTGGTGGGAG
AAGATGTGGTAGATGGGAAAGTCAACTTCAGTCACTAGCACAGCCAGAGA
ATCCGGAGACGATAGCCTCTCCCATACAGAAAATGGAACGGTCATTGAAT
ACCACGAAACCAAGCGTGGTCTTTCTTCTCGCCATGTGCAGTTGATGGCC
ATTGGGGGATCGATTGGAACAGGCCTATTTGTCGGTATTGGTTCTTACCT
CCGCGATGCCGGGCCTCTGTCCCTGTTCCTGGGGTATCTCTTCTATGGCG
TTCTGTTCATCTGGCCCACAAACCTATGCGTGGGTGAGATGTGCGCCTAC
CTGCCAATCCGAGGATCTATCTTCGAACTAGCAGCGCGGTACATCGATCC
AGCCTTCGGATTTGCAATGGGCTGGGTATACTTTTACGGCGGACTCATGC
TTCTCTGCACCGAGTATTCCGCTGTGGCGACGGTGATGCAGTACTGGAAT
ACCAGCGTCAACCCAGCCGTCTGGGTCGCCATGGCCATGGTCGTATGCTT
CCTCCTGAACATCGTCGCCGTCAAATACTATGGAGAGACCGAATTCATCA
TGGCCTCCACCAAGATCCTCCTTCTCATCGGTCTGGTCCTCTTGACCTTC
ATCACCATGCTCGGCGGAAATCCCCACCACGACATCTACGGCTTCCGCAA
CTGGACACACGGCGTCATGTACGAATACTATACCACTGGCAACACCGGCC
GCTTCCTGGGCTGGTTCTCCGTGGTCGTGTACGCCGCTTTCTCCGTCGCT
GGACCCGACCTTCCAGCCCTGGCCGCCGGCGAGATCGAAAACCCGCGCTT
CACGATTCCCCGCGTCGTCAAAATGACCTTCTACCGTATCGTCGGCTTTT
ACGTCATTGGTGTCCTCGCCGTGAGTATCATCTGCTCCCCAAACGACCCT
CGTCTCATAAGCGCCATCGAATCCTCTGCTGCTGGATCCGCCGCCTCTCC
ATGGGTGATTGGCATCCAGAATCTCGGCATCCACGGCCTTCCCGGCTTCA
TCAACTTTCTCATCCTCCTAGCCGGCTGGTCCTGCGGAAATGCCTACCTC
TACAGCTCCAGCCGCACCCTCTACTCGCTCGCACGCGATCACCAAGCCCC
TGCCTTTCTCCTGAAATGTACCTCCGCCGGAGTCCCCATCAACTGCGTTC
TCGTCGTCTCCCTCCTCTCTTGCATCACATTCCTCGTCGCCGATACCTCT
GCCGTCACGGTCTTCTACTGGTTCGTCGACCTCACGACCACCGCCTTTAT
CCTCACCTACACCGGCATGGTCTGTGTTTTCCTAGCCTGGTATCGTGCGC
TCAAGGCACAGGGCATCGATCGGAAGACATTCCTCCCCTGGGCGTCACCG
TGTCAGCCGTACGCAGCTATCGTGGCATTGATCATTGGGTGCTTGGTGAC
GCTGTTTAATGGGTTCACGGTGTTTGTCCCGTTCAGTGTCGAGGGGTTTA
TCACTTCGTACTTCGGCGTGGCGTTCTGGGCCGTCATGTTCCTGTTTTGG
AAGGTGTATCAGGGCACGAAGTGGGTGGATCCGGCAAAGGCTGATATATT
TTCTGGCAAGGCTGAGGTCGACGCTGAGTGTCGGGTTTGGGAAGATGGAG
GGTTCTTGGAGCGGCGGAGGGCGGAGTTGGCAAAGATGCATTGGGCGAGA
AGGTGGTGGGAGAAGATGTGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003672CBS51388_003672Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003672-T1.exon1CBS51388_003672-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_003672-T1.exon2CBS51388_003672-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003672-T1.cdsCBS51388_003672-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003672-T1CBS51388_003672-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004841
DBxrefPFAM:PF13520
DBxrefPFAM:PF00324
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:2283580..2285287 +
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