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Sequences
The following sequences are available for this feature:
mRNA from alignment at An05:567654..568763+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003939-T1 ID=CBS51388_003939-T1|Name=CBS51388_003939-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1110bp|location=Sequence derived from alignment at An05:567654..568763+ (Aspergillus niger CBS 513.88)
ATGCTTCCGGATAGTCCACGGTTTCTTGCATCTGTCGGTCGTTACGACGA
AGCTCAGCAGGTTCTTAACAAGATCCGTTGCCATAGAGCCAGTCAATCAG
AGATTGACCTCGAATACAAAGAAATCATTGCGACTGTGCAAGAAGGCAAA
CCAAGCTCGCCCCTTCAGTTCGCCAAAATATTGATCGGCAAAGGAGGAAG
CCCTGGCTCCAATCTGGGTCGACGCGCCTGGCTGTGTATATGGCTCCAGA
TCATGGCGTCCTGGACTGGTATTACGGTAAGTGGCGTTGCAGTATGAAGT
CGCATGGATAGTCTGGCTGATATACTTCCACCTTGACAGGCTGTGACGGC
ATATTCTCCTGTTCTGCTTCGGCAAGCGGGCTACAGCGAGCTGACCCAAA
ATGGCCTTGCTGGAGGATTAAACACAATTGGTATTCTCGGCACTATAATC
AGTACGCAAATTGTAGATCGGATTGGAAGGCGAAAATGTTTGATGCTTGG
CTCCATCATCTTGTTCGTTGTCGAGCTTGTGGTAAGTTCCACGCGCCCCT
ATAACGTCTTTAACTCCGATTCTAAGATGTATCCTCTCCAGGCGGGATCT
GTCTACGAGGCGTCCCTCCATCAGCCGGATAAAGCCAGCCAATTTGCACC
TGCTGCTGTTGCGATGCTCTTCCTGTTCAACTTGGGATATGCCGCGACCT
GGGGAACCGTCGCTTTCTTGATACCAACCGAGATCTTTCCCTCCGACCTT
CGGGCTCAAGGTAACGGCTTTGGCATCACCGGCTGGGCCGTTGGTGTTGG
GATGACCACACTGGTGAACCCAATTATGTTTGCAAGTATTGGAAGTCGCA
GCTACTTCCTCCTCGCTGGACTAAATCTTTTGTGGGTTCCAACCATTTAC
CTGTTCTATCCAGAGACCCGCAATCGGACTTTAGAGTCTATTGACTACCT
GTTTTCGACTTCGAGCCCATTTTATTGGGATATGGAGAGGGCCTTTCGGC
TGTGTATGGATGGGAAGGTGGAGAAGCATGCTAATGAGCTGGCTATAAAG
GTCGCGGGCCAGGATGAAGCCCAGCAGGAGTTCCACGAGAACATTCAGAA
TAGTGTGTAA back to topCoding sequence (CDS) from alignment at An05:567654..568763+ >CBS51388_003939-T1 ID=CBS51388_003939-T1|Name=CBS51388_003939-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2961bp|location=Sequence derived from alignment at An05:567654..568763+ (Aspergillus niger CBS 513.88)
ATGCTTCCGGATAGTCCACGGTTTCTTGCATCTGTCGGTCGTTACGACGA
AGCTCAGCAGGTTCTTAACAAGATCCGTTGCCATAGAGCCAGTCAATCAG
AGATTGACCTCGAATACAAAGAAATCATTGCGACTGTGCAAGAAGGCAAA
CCAAGCTCGCCCCTTCAGTTCGCCAAAATATTGATCGGCAAAGGAGGAAG
CCCTGGCTCCAATCTGGGTCGACGCGCCTGGCTGTGTATATGGCTCCAGA
TCATGGCGTCCTGGACTGGTATTACGGCTGTGACGGCATATTCTCCTGTT
CTGCTTCGGCAAGCGGGCTACAGCGAGCTGACCCAAAATGGCCTTGCTGG
AGGATTAAACACAATTGGTATTCTCGGCACTATAATCAGTACGCAAATTG
TAGATCGGATTGGAAGGCGAAAATGTTTGATGCTTGGCTCCATCATCTTG
TTCGTTGTCGAGCTTGTGGCGGGATCTGTCTACGAGGCGTCCCTCCATCA
GCCGGATAAAGCCAGCCAATTTGCACCTGCTGCTGTTGCGATGCTCTTCC
TGTTCAACTTGGGATATGCCGCGACCTGGGGAACCGTCGCTTTCTTGATA
CCAACCGAGATCTTTCCCTCCGACCTTCGGGCTCAAGGTAACGGCTTTGG
CATCACCGGCTGGGCCGTTGGTGTTGGGATGACCACACTGGTGAACCCAA
TTATGTTTGCAAGTATTGGAAGTCGCAGCTACTTCCTCCTCGCTGGACTA
AATCTTTTGTGGGTTCCAACCATTTACCTGTTCTATCCAGAGACCCGCAA
TCGGACTTTAGAGTCTATTGACTACCTGTTTTCGACTTCGAGCCCATTTT
ATTGGGATATGGAGAGGGCCTTTCGGCTGTGTATGGATGGGAAGGTGGAG
AAGCATGCTAATGAGCTGGCTATAAAGGTCGCGGGCCAGGATGAAGCCCA
GCAGGAGTTCCACGAGAACATTCAGAATAGTGTGTAAATGCTTCCGGATA
GTCCACGGTTTCTTGCATCTGTCGGTCGTTACGACGAAGCTCAGCAGGTT
CTTAACAAGATCCGTTGCCATAGAGCCAGTCAATCAGAGATTGACCTCGA
ATACAAAGAAATCATTGCGACTGTGCAAGAAGGCAAACCAAGCTCGCCCC
TTCAGTTCGCCAAAATATTGATCGGCAAAGGAGGAAGCCCTGGCTCCAAT
CTGGGTCGACGCGCCTGGCTGTGTATATGGCTCCAGATCATGGCGTCCTG
GACTGGTATTACGGCTGTGACGGCATATTCTCCTGTTCTGCTTCGGCAAG
CGGGCTACAGCGAGCTGACCCAAAATGGCCTTGCTGGAGGATTAAACACA
ATTGGTATTCTCGGCACTATAATCAGTACGCAAATTGTAGATCGGATTGG
AAGGCGAAAATGTTTGATGCTTGGCTCCATCATCTTGTTCGTTGTCGAGC
TTGTGGCGGGATCTGTCTACGAGGCGTCCCTCCATCAGCCGGATAAAGCC
AGCCAATTTGCACCTGCTGCTGTTGCGATGCTCTTCCTGTTCAACTTGGG
ATATGCCGCGACCTGGGGAACCGTCGCTTTCTTGATACCAACCGAGATCT
TTCCCTCCGACCTTCGGGCTCAAGGTAACGGCTTTGGCATCACCGGCTGG
GCCGTTGGTGTTGGGATGACCACACTGGTGAACCCAATTATGTTTGCAAG
TATTGGAAGTCGCAGCTACTTCCTCCTCGCTGGACTAAATCTTTTGTGGG
TTCCAACCATTTACCTGTTCTATCCAGAGACCCGCAATCGGACTTTAGAG
TCTATTGACTACCTGTTTTCGACTTCGAGCCCATTTTATTGGGATATGGA
GAGGGCCTTTCGGCTGTGTATGGATGGGAAGGTGGAGAAGCATGCTAATG
AGCTGGCTATAAAGGTCGCGGGCCAGGATGAAGCCCAGCAGGAGTTCCAC
GAGAACATTCAGAATAGTGTGTAAATGCTTCCGGATAGTCCACGGTTTCT
TGCATCTGTCGGTCGTTACGACGAAGCTCAGCAGGTTCTTAACAAGATCC
GTTGCCATAGAGCCAGTCAATCAGAGATTGACCTCGAATACAAAGAAATC
ATTGCGACTGTGCAAGAAGGCAAACCAAGCTCGCCCCTTCAGTTCGCCAA
AATATTGATCGGCAAAGGAGGAAGCCCTGGCTCCAATCTGGGTCGACGCG
CCTGGCTGTGTATATGGCTCCAGATCATGGCGTCCTGGACTGGTATTACG
GCTGTGACGGCATATTCTCCTGTTCTGCTTCGGCAAGCGGGCTACAGCGA
GCTGACCCAAAATGGCCTTGCTGGAGGATTAAACACAATTGGTATTCTCG
GCACTATAATCAGTACGCAAATTGTAGATCGGATTGGAAGGCGAAAATGT
TTGATGCTTGGCTCCATCATCTTGTTCGTTGTCGAGCTTGTGGCGGGATC
TGTCTACGAGGCGTCCCTCCATCAGCCGGATAAAGCCAGCCAATTTGCAC
CTGCTGCTGTTGCGATGCTCTTCCTGTTCAACTTGGGATATGCCGCGACC
TGGGGAACCGTCGCTTTCTTGATACCAACCGAGATCTTTCCCTCCGACCT
TCGGGCTCAAGGTAACGGCTTTGGCATCACCGGCTGGGCCGTTGGTGTTG
GGATGACCACACTGGTGAACCCAATTATGTTTGCAAGTATTGGAAGTCGC
AGCTACTTCCTCCTCGCTGGACTAAATCTTTTGTGGGTTCCAACCATTTA
CCTGTTCTATCCAGAGACCCGCAATCGGACTTTAGAGTCTATTGACTACC
TGTTTTCGACTTCGAGCCCATTTTATTGGGATATGGAGAGGGCCTTTCGG
CTGTGTATGGATGGGAAGGTGGAGAAGCATGCTAATGAGCTGGCTATAAA
GGTCGCGGGCCAGGATGAAGCCCAGCAGGAGTTCCACGAGAACATTCAGA
ATAGTGTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005828 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An05 | supercontig | An05:567654..568763 + |
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