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Sequences
The following sequences are available for this feature:
mRNA from alignment at An06:205636..206526- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004016-T1 ID=CBS51388_004016-T1|Name=CBS51388_004016-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=891bp|location=Sequence derived from alignment at An06:205636..206526- (Aspergillus niger CBS 513.88)
ATGTCACCTGAAACGCAAGAATCCGGGCCCTTCGCATCCCACATCTTCGC
AGGAGTCCTGCTAGACTTTGACGGTACCATCATAGATTCAACAGAAGGTG
AGTCAACAATTCCCATACAAAACCCAAAGCGGATCTAACATTTGCCCAGC
GATAATCGAGAACTGGAAAAGGTATACCCTCACCAGCACATCTTACAAGC
AACTTTACTCACAACTACAGAATCGGCAATGAACTAGGCATCGACCATCA
TGAAATCCTCCGCACCTCGCACGGGCGACGGAGCATCGATGTCCTACAAC
AATTAGATCCCACAAAGGCCAACTGGGAATGTATGTAGACTTACATTACC
TTCCATATCCCATCCTAAGTCATGACTGACCTAAAGTTTGTCCTTAGATG
TTAGCGAAATGGAATCCCAGATCCCCACGCTTAGCAAAACCCCCGCCGTC
GAGATCCCCGGTGCGCGCAACCTCCTCGAATCGTTAGCCAAATTCCACAT
TCCTCACGCTATAGTGACATCTGGAACGAAAGCACTATTAAGTGGCTGGT
TAAACGTCCTACAACTGCCTCAACCGCAACATGTCACTGTAGCGGAGGAT
GTTACGTTGGGAAAGCCGGATCCGGAGGGATATCGCAAGGGAAAAGAGAA
GATTTTGGCTGGGAGGGTGAATGATGATAATGGAAGTAAAGATGTTCTGG
TGGTGGAGGATGCTCCGGCTGGTATCCGGGCGGGCAAAGCAGCTAATTGT
AAGGTTTTGGCGGTTGCGACGACGCATTCTGTCGATGTGTTGAAGAGGGC
TGGGGCTGATTGGGTGGTGAGGGACTTGAGGTTCGTGGGGGTGGAGAGGT
GTGAGAGGGGTTTTGAAGTTCATTTTTCGGGGTTGTTGTAG back to topCoding sequence (CDS) from alignment at An06:205636..206526- >CBS51388_004016-T1 ID=CBS51388_004016-T1|Name=CBS51388_004016-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2205bp|location=Sequence derived from alignment at An06:205636..206526- (Aspergillus niger CBS 513.88)
ATGTTAGCGAAATGGAATCCCAGATCCCCACGCTTAGCAAAACCCCCGCC
GTCGAGATCCCCGGTGCGCGCAACCTCCTCGAATCGTTAGCCAAATTCCA
CATTCCTCACGCTATAGTGACATCTGGAACGAAAGCACTATTAAGTGGCT
GGTTAAACGTCCTACAACTGCCTCAACCGCAACATGTCACTGTAGCGGAG
GATGTTACGTTGGGAAAGCCGGATCCGGAGGGATATCGCAAGGGAAAAGA
GAAGATTTTGGCTGGGAGGGTGAATGATGATAATGGAAGTAAAGATGTTC
TGGTGGTGGAGGATGCTCCGGCTGGTATCCGGGCGGGCAAAGCAGCTAAT
TGTAAGGTTTTGGCGGTTGCGACGACGCATTCTGTCGATGTGTTGAAGAG
GGCTGGGGCTGATTGGGTGGTGAGGGACTTGAGGTTCGTGGGGGTGGAGA
GGTGTGAGAGGGGTTTTGAAGTTCATTTTTCGGGGTTGTTGTAGCACATC
TTACAAGCAACTTTACTCACAACTACAGAATCGGCAATGAACTAGGCATC
GACCATCATGAAATCCTCCGCACCTCGCACGGGCGACGGAGCATCGATGT
CCTACAACAATTAGATCCCACAAAGGCCAACTGGGAATATGTCACCTGAA
ACGCAAGAATCCGGGCCCTTCGCATCCCACATCTTCGCAGGAGTCCTGCT
AGACTTTGACGGTACCATCATAGATTCAACAGAAGATGTTAGCGAAATGG
AATCCCAGATCCCCACGCTTAGCAAAACCCCCGCCGTCGAGATCCCCGGT
GCGCGCAACCTCCTCGAATCGTTAGCCAAATTCCACATTCCTCACGCTAT
AGTGACATCTGGAACGAAAGCACTATTAAGTGGCTGGTTAAACGTCCTAC
AACTGCCTCAACCGCAACATGTCACTGTAGCGGAGGATGTTACGTTGGGA
AAGCCGGATCCGGAGGGATATCGCAAGGGAAAAGAGAAGATTTTGGCTGG
GAGGGTGAATGATGATAATGGAAGTAAAGATGTTCTGGTGGTGGAGGATG
CTCCGGCTGGTATCCGGGCGGGCAAAGCAGCTAATTGTAAGGTTTTGGCG
GTTGCGACGACGCATTCTGTCGATGTGTTGAAGAGGGCTGGGGCTGATTG
GGTGGTGAGGGACTTGAGGTTCGTGGGGGTGGAGAGGTGTGAGAGGGGTT
TTGAAGTTCATTTTTCGGGGTTGTTGTAGCACATCTTACAAGCAACTTTA
CTCACAACTACAGAATCGGCAATGAACTAGGCATCGACCATCATGAAATC
CTCCGCACCTCGCACGGGCGACGGAGCATCGATGTCCTACAACAATTAGA
TCCCACAAAGGCCAACTGGGAATATGTCACCTGAAACGCAAGAATCCGGG
CCCTTCGCATCCCACATCTTCGCAGGAGTCCTGCTAGACTTTGACGGTAC
CATCATAGATTCAACAGAAGATGTTAGCGAAATGGAATCCCAGATCCCCA
CGCTTAGCAAAACCCCCGCCGTCGAGATCCCCGGTGCGCGCAACCTCCTC
GAATCGTTAGCCAAATTCCACATTCCTCACGCTATAGTGACATCTGGAAC
GAAAGCACTATTAAGTGGCTGGTTAAACGTCCTACAACTGCCTCAACCGC
AACATGTCACTGTAGCGGAGGATGTTACGTTGGGAAAGCCGGATCCGGAG
GGATATCGCAAGGGAAAAGAGAAGATTTTGGCTGGGAGGGTGAATGATGA
TAATGGAAGTAAAGATGTTCTGGTGGTGGAGGATGCTCCGGCTGGTATCC
GGGCGGGCAAAGCAGCTAATTGTAAGGTTTTGGCGGTTGCGACGACGCAT
TCTGTCGATGTGTTGAAGAGGGCTGGGGCTGATTGGGTGGTGAGGGACTT
GAGGTTCGTGGGGGTGGAGAGGTGTGAGAGGGGTTTTGAAGTTCATTTTT
CGGGGTTGTTGTAGCACATCTTACAAGCAACTTTACTCACAACTACAGAA
TCGGCAATGAACTAGGCATCGACCATCATGAAATCCTCCGCACCTCGCAC
GGGCGACGGAGCATCGATGTCCTACAACAATTAGATCCCACAAAGGCCAA
CTGGGAATATGTCACCTGAAACGCAAGAATCCGGGCCCTTCGCATCCCAC
ATCTTCGCAGGAGTCCTGCTAGACTTTGACGGTACCATCATAGATTCAAC
AGAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036412 |
| DBxref | InterPro:IPR041492 |
| DBxref | InterPro:IPR023198 |
| DBxref | InterPro:IPR023214 |
| DBxref | PFAM:PF13419 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An06 | supercontig | An06:205636..206526 - |
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