|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An06:235653..236591+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004028-T1 ID=CBS51388_004028-T1|Name=CBS51388_004028-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=939bp|location=Sequence derived from alignment at An06:235653..236591+ (Aspergillus niger CBS 513.88)
ATGAAGACCTTCTCGCTCTCCCTCGCTCTTCTGGCCGCTGCCAGCATGGT
CAGCGCTGATGTTTCCGTCAGCGACTGCGCTGTATGTTTACTCTGACGTT
ATTGTTGTTGACGCGCCTTACTGACCAGAGCGCGTCTTTAGCAAATGTGT
CTCAGCAACATGAGCGGAAAGGCTTCTGAGCTTGGCTGCTCCAGCGGCGA
CCTGTCCTGCCTGTGCAGCAAGCCCGACTACAGCTACGGTATTCGCGACT
GCACCGCTCAGGCCTGCCCCAATGATGACGCCAACGCCGTTGTCTCGTCG
GCTCTTGCTTCTTGCCCCACCTCCTCTGGTACGTCGCTTACTCCAACGCA
GTTTGATTCCCATTGGTAACAATTACTAACCTAATATACAGGCAGCTCCG
ACTCTGCCTCTGCTACTGGTGCTTCTAGCACTGGCTCCGGCGCTAGCGGT
GCTGGATCTACCACCTCTGCCTCCTCGGCTAGCGGCAGTGGTGCCTCGTC
TGCCTCTGGAACCAACAGTGGTAACACCAGCGGTGCCACGACTGGCGCTA
CCACCAGTGGAGCGGTAAGCTTAATATGCTCGTGATACCAACGTCTTGAA
GCTAATTCTTTGCAGACTTCTGGTGCGACCACCCTGAGCACTATCACCAG
CACGAGCACTAGCACCGGCACTGTCTCTGGTCAGACCACTCTGAGCACTA
TCACTGGAACCAGCACTAGCACCGGTACTGTCTCTGGTGCCACTTCGGGC
TCTTCTGGCAGCTCTACCTCTGGCTCTGGCTCTGGTTCTGGATCTGGCTC
TTCCGGCTCTGGCGGCTCTTCCTCTGCGACCGGAACTGCTCCCTCTTCCT
CCGAGACTACTGGTGCTGCCCCCAAGCTTAACGTTGCCAGCAGTGGAATT
GCCGGTGCCCTTGGTCTCGCTGCTATGTTCCTTCTCTAA back to topCoding sequence (CDS) from alignment at An06:235653..236591+ >CBS51388_004028-T1 ID=CBS51388_004028-T1|Name=CBS51388_004028-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3060bp|location=Sequence derived from alignment at An06:235653..236591+ (Aspergillus niger CBS 513.88)
ATGAAGACCTTCTCGCTCTCCCTCGCTCTTCTGGCCGCTGCCAGCATGGT
CAGCGCTGATGTTTCCGTCAGCGACTGCGCTCAAATGTGTCTCAGCAACA
TGAGCGGAAAGGCTTCTGAGCTTGGCTGCTCCAGCGGCGACCTGTCCTGC
CTGTGCAGCAAGCCCGACTACAGCTACGGTATTCGCGACTGCACCGCTCA
GGCCTGCCCCAATGATGACGCCAACGCCGTTGTCTCGTCGGCTCTTGCTT
CTTGCCCCACCTCCTCTGGCAGCTCCGACTCTGCCTCTGCTACTGGTGCT
TCTAGCACTGGCTCCGGCGCTAGCGGTGCTGGATCTACCACCTCTGCCTC
CTCGGCTAGCGGCAGTGGTGCCTCGTCTGCCTCTGGAACCAACAGTGGTA
ACACCAGCGGTGCCACGACTGGCGCTACCACCAGTGGAGCGACTTCTGGT
GCGACCACCCTGAGCACTATCACCAGCACGAGCACTAGCACCGGCACTGT
CTCTGGTCAGACCACTCTGAGCACTATCACTGGAACCAGCACTAGCACCG
GTACTGTCTCTGGTGCCACTTCGGGCTCTTCTGGCAGCTCTACCTCTGGC
TCTGGCTCTGGTTCTGGATCTGGCTCTTCCGGCTCTGGCGGCTCTTCCTC
TGCGACCGGAACTGCTCCCTCTTCCTCCGAGACTACTGGTGCTGCCCCCA
AGCTTAACGTTGCCAGCAGTGGAATTGCCGGTGCCCTTGGTCTCGCTGCT
ATGTTCCTTCTCTAAATGAAGACCTTCTCGCTCTCCCTCGCTCTTCTGGC
CGCTGCCAGCATGGTCAGCGCTGATGTTTCCGTCAGCGACTGCGCTCAAA
TGTGTCTCAGCAACATGAGCGGAAAGGCTTCTGAGCTTGGCTGCTCCAGC
GGCGACCTGTCCTGCCTGTGCAGCAAGCCCGACTACAGCTACGGTATTCG
CGACTGCACCGCTCAGGCCTGCCCCAATGATGACGCCAACGCCGTTGTCT
CGTCGGCTCTTGCTTCTTGCCCCACCTCCTCTGGCAGCTCCGACTCTGCC
TCTGCTACTGGTGCTTCTAGCACTGGCTCCGGCGCTAGCGGTGCTGGATC
TACCACCTCTGCCTCCTCGGCTAGCGGCAGTGGTGCCTCGTCTGCCTCTG
GAACCAACAGTGGTAACACCAGCGGTGCCACGACTGGCGCTACCACCAGT
GGAGCGACTTCTGGTGCGACCACCCTGAGCACTATCACCAGCACGAGCAC
TAGCACCGGCACTGTCTCTGGTCAGACCACTCTGAGCACTATCACTGGAA
CCAGCACTAGCACCGGTACTGTCTCTGGTGCCACTTCGGGCTCTTCTGGC
AGCTCTACCTCTGGCTCTGGCTCTGGTTCTGGATCTGGCTCTTCCGGCTC
TGGCGGCTCTTCCTCTGCGACCGGAACTGCTCCCTCTTCCTCCGAGACTA
CTGGTGCTGCCCCCAAGCTTAACGTTGCCAGCAGTGGAATTGCCGGTGCC
CTTGGTCTCGCTGCTATGTTCCTTCTCTAAATGAAGACCTTCTCGCTCTC
CCTCGCTCTTCTGGCCGCTGCCAGCATGGTCAGCGCTGATGTTTCCGTCA
GCGACTGCGCTCAAATGTGTCTCAGCAACATGAGCGGAAAGGCTTCTGAG
CTTGGCTGCTCCAGCGGCGACCTGTCCTGCCTGTGCAGCAAGCCCGACTA
CAGCTACGGTATTCGCGACTGCACCGCTCAGGCCTGCCCCAATGATGACG
CCAACGCCGTTGTCTCGTCGGCTCTTGCTTCTTGCCCCACCTCCTCTGGC
AGCTCCGACTCTGCCTCTGCTACTGGTGCTTCTAGCACTGGCTCCGGCGC
TAGCGGTGCTGGATCTACCACCTCTGCCTCCTCGGCTAGCGGCAGTGGTG
CCTCGTCTGCCTCTGGAACCAACAGTGGTAACACCAGCGGTGCCACGACT
GGCGCTACCACCAGTGGAGCGACTTCTGGTGCGACCACCCTGAGCACTAT
CACCAGCACGAGCACTAGCACCGGCACTGTCTCTGGTCAGACCACTCTGA
GCACTATCACTGGAACCAGCACTAGCACCGGTACTGTCTCTGGTGCCACT
TCGGGCTCTTCTGGCAGCTCTACCTCTGGCTCTGGCTCTGGTTCTGGATC
TGGCTCTTCCGGCTCTGGCGGCTCTTCCTCTGCGACCGGAACTGCTCCCT
CTTCCTCCGAGACTACTGGTGCTGCCCCCAAGCTTAACGTTGCCAGCAGT
GGAATTGCCGGTGCCCTTGGTCTCGCTGCTATGTTCCTTCTCTAAATGAA
GACCTTCTCGCTCTCCCTCGCTCTTCTGGCCGCTGCCAGCATGGTCAGCG
CTGATGTTTCCGTCAGCGACTGCGCTCAAATGTGTCTCAGCAACATGAGC
GGAAAGGCTTCTGAGCTTGGCTGCTCCAGCGGCGACCTGTCCTGCCTGTG
CAGCAAGCCCGACTACAGCTACGGTATTCGCGACTGCACCGCTCAGGCCT
GCCCCAATGATGACGCCAACGCCGTTGTCTCGTCGGCTCTTGCTTCTTGC
CCCACCTCCTCTGGCAGCTCCGACTCTGCCTCTGCTACTGGTGCTTCTAG
CACTGGCTCCGGCGCTAGCGGTGCTGGATCTACCACCTCTGCCTCCTCGG
CTAGCGGCAGTGGTGCCTCGTCTGCCTCTGGAACCAACAGTGGTAACACC
AGCGGTGCCACGACTGGCGCTACCACCAGTGGAGCGACTTCTGGTGCGAC
CACCCTGAGCACTATCACCAGCACGAGCACTAGCACCGGCACTGTCTCTG
GTCAGACCACTCTGAGCACTATCACTGGAACCAGCACTAGCACCGGTACT
GTCTCTGGTGCCACTTCGGGCTCTTCTGGCAGCTCTACCTCTGGCTCTGG
CTCTGGTTCTGGATCTGGCTCTTCCGGCTCTGGCGGCTCTTCCTCTGCGA
CCGGAACTGCTCCCTCTTCCTCCGAGACTACTGGTGCTGCCCCCAAGCTT
AACGTTGCCAGCAGTGGAATTGCCGGTGCCCTTGGTCTCGCTGCTATGTT
CCTTCTCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| DBxref | InterPro:IPR008427 |
| DBxref | PFAM:PF05730 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An06 | supercontig | An06:235653..236591 + |
|
